Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002311-TA|BGIBMGA002311-PA|IPR001424|Superoxide
dismutase, copper/zinc binding, IPR008388|ATPase, V1 complex, subunit
S1
(1471 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16469-1|BAA03938.1| 281|Homo sapiens ORF protein. 58 2e-07
BX936385-2|CAI95782.1| 466|Homo sapiens ATPase, H+ transporting... 58 2e-07
BX936347-11|CAI43213.2| 466|Homo sapiens ATPase, H+ transportin... 58 2e-07
BC000724-1|AAH00724.1| 470|Homo sapiens ATPase, H+ transporting... 58 2e-07
AL136851-1|CAB66785.1| 466|Homo sapiens hypothetical protein pr... 58 2e-07
AK090462-1|BAC03443.1| 380|Homo sapiens FLJ00383 protein protein. 58 2e-07
AK075284-1|BAC11520.1| 470|Homo sapiens protein ( Homo sapiens ... 58 2e-07
BC109247-1|AAI09248.1| 63|Homo sapiens ATP6AP1 protein protein. 51 3e-05
AY753192-1|AAV30085.1| 754|Homo sapiens p87 phosphoinositide 3-... 34 3.3
BC112191-1|AAI12192.1| 224|Homo sapiens hypothetical protein LO... 33 5.8
BC093982-1|AAH93982.1| 224|Homo sapiens hypothetical protein LO... 33 5.8
>D16469-1|BAA03938.1| 281|Homo sapiens ORF protein.
Length = 281
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 1396 LRLPDVQMQIFMDSTERFADAFDCIGFTTVPIWSGLMVSFIMLLGLAVSVCMIMDIKTMD 1455
+ L D Q+Q F E+F+ A DC F + IW GL+ S ML + MI+ +KTMD
Sbjct: 206 MMLQDFQIQAFNVMGEQFSYASDCASFFSPGIWMGLLTSLFMLFIFTYGLHMILSLKTMD 265
Query: 1456 RFESNRSKQLTIT 1468
RF+ ++ +++T
Sbjct: 266 RFDDHKGPTISLT 278
>BX936385-2|CAI95782.1| 466|Homo sapiens ATPase, H+ transporting,
lysosomal accessory protein 1 protein.
Length = 466
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 1396 LRLPDVQMQIFMDSTERFADAFDCIGFTTVPIWSGLMVSFIMLLGLAVSVCMIMDIKTMD 1455
+ L D Q+Q F E+F+ A DC F + IW GL+ S ML + MI+ +KTMD
Sbjct: 391 MMLQDFQIQAFNVMGEQFSYASDCASFFSPGIWMGLLTSLFMLFIFTYGLHMILSLKTMD 450
Query: 1456 RFESNRSKQLTIT 1468
RF+ ++ +++T
Sbjct: 451 RFDDHKGPTISLT 463
>BX936347-11|CAI43213.2| 466|Homo sapiens ATPase, H+ transporting,
lysosomal accessory protein 1 protein.
Length = 466
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 1396 LRLPDVQMQIFMDSTERFADAFDCIGFTTVPIWSGLMVSFIMLLGLAVSVCMIMDIKTMD 1455
+ L D Q+Q F E+F+ A DC F + IW GL+ S ML + MI+ +KTMD
Sbjct: 391 MMLQDFQIQAFNVMGEQFSYASDCASFFSPGIWMGLLTSLFMLFIFTYGLHMILSLKTMD 450
Query: 1456 RFESNRSKQLTIT 1468
RF+ ++ +++T
Sbjct: 451 RFDDHKGPTISLT 463
>BC000724-1|AAH00724.1| 470|Homo sapiens ATPase, H+ transporting,
lysosomal accessory protein 1 protein.
Length = 470
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 1396 LRLPDVQMQIFMDSTERFADAFDCIGFTTVPIWSGLMVSFIMLLGLAVSVCMIMDIKTMD 1455
+ L D Q+Q F E+F+ A DC F + IW GL+ S ML + MI+ +KTMD
Sbjct: 395 MMLQDFQIQAFNVMGEQFSYASDCASFFSPGIWMGLLTSLFMLFIFTYGLHMILSLKTMD 454
Query: 1456 RFESNRSKQLTIT 1468
RF+ ++ +++T
Sbjct: 455 RFDDHKGPTISLT 467
>AL136851-1|CAB66785.1| 466|Homo sapiens hypothetical protein
protein.
Length = 466
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 1396 LRLPDVQMQIFMDSTERFADAFDCIGFTTVPIWSGLMVSFIMLLGLAVSVCMIMDIKTMD 1455
+ L D Q+Q F E+F+ A DC F + IW GL+ S ML + MI+ +KTMD
Sbjct: 391 MMLQDFQIQAFNVMGEQFSYASDCASFFSPGIWMGLLTSLFMLFIFTYGLHMILSLKTMD 450
Query: 1456 RFESNRSKQLTIT 1468
RF+ ++ +++T
Sbjct: 451 RFDDHKGPTISLT 463
>AK090462-1|BAC03443.1| 380|Homo sapiens FLJ00383 protein protein.
Length = 380
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 1396 LRLPDVQMQIFMDSTERFADAFDCIGFTTVPIWSGLMVSFIMLLGLAVSVCMIMDIKTMD 1455
+ L D Q+Q F E+F+ A DC F + IW GL+ S ML + MI+ +KTMD
Sbjct: 305 MMLQDFQIQAFNVMGEQFSYASDCASFFSPGIWMGLLTSLFMLFIFTYGLHMILSLKTMD 364
Query: 1456 RFESNRSKQLTIT 1468
RF+ ++ +++T
Sbjct: 365 RFDDHKGPTISLT 377
>AK075284-1|BAC11520.1| 470|Homo sapiens protein ( Homo sapiens cDNA
FLJ90803 fis, clone Y79AA1000270, highly similar to
Vacuolar ATP synthase subunit S1 precursor (EC 3.6.3.14).
).
Length = 470
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 1396 LRLPDVQMQIFMDSTERFADAFDCIGFTTVPIWSGLMVSFIMLLGLAVSVCMIMDIKTMD 1455
+ L D Q+Q F E+F+ A DC F + IW GL+ S ML + MI+ +KTMD
Sbjct: 395 MMLQDFQIQAFNVMGEQFSYASDCASFFSPGIWMGLLTSLFMLFIFTYGLHMILSLKTMD 454
Query: 1456 RFESNRSKQLTIT 1468
RF+ ++ +++T
Sbjct: 455 RFDDHKGPTISLT 467
>BC109247-1|AAI09248.1| 63|Homo sapiens ATP6AP1 protein protein.
Length = 63
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 1411 ERFADAFDCIGFTTVPIWSGLMVSFIMLLGLAVSVCMIMDIKTMDRFESNRSKQLTIT 1468
E+F+ A DC F + IW GL+ S ML + MI+ +KTMDRF+ ++ +++T
Sbjct: 3 EQFSYASDCASFFSPGIWMGLLTSLFMLFIFTYGLHMILSLKTMDRFDDHKGPTISLT 60
>AY753192-1|AAV30085.1| 754|Homo sapiens p87 phosphoinositide
3-kinase gamma adapter protein protein.
Length = 754
Score = 34.3 bits (75), Expect = 3.3
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 17/147 (11%)
Query: 34 EIEFSHKNDTLISIRTNLKPTLQYPDGVWRWTIHEFPVDYRDISESRCSEETLGREIIDL 93
E++ ++ + P LQ G+WRW++H+ V+ RD +S L RE+
Sbjct: 7 ELDLQRSVQAVLRELSTQAPALQSNQGMWRWSLHK-KVE-RDPGKSPVLVRILLRELEKA 64
Query: 94 -TEELGYLIIPGKDHAEFEIKNTLTGLNGLWGRSIVLETAERDRIICASILSTEKLYETH 152
+++L ++IIP H + TG I E +R C +L+ Y T
Sbjct: 65 ESQDLRHVIIP-LLHTVMYVLTKATG--------ITEELYQRIYAFCTRLLTLPTPYCTV 115
Query: 153 AL-----AKFTAPVAGTLHFRWISAKE 174
AL K V GTL+ R + A++
Sbjct: 116 ALDCAIRLKTEMAVPGTLYQRMVIAEQ 142
>BC112191-1|AAI12192.1| 224|Homo sapiens hypothetical protein
LOC92270 protein.
Length = 224
Score = 33.5 bits (73), Expect = 5.8
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 22/128 (17%)
Query: 1344 WWTAVGVEVIFGSLETSGLNLKAPAPPDAPSAVLGRSYHCSQPLVYTSDEAILRLP---- 1399
W++ VE+I S +++A P A G SY C + D+A+L LP
Sbjct: 58 WFSLRRVEII------SNNSIQAVFNPTGVYAPSGYSYRCQRVGSLQQDQALL-LPSDTD 110
Query: 1400 -----------DVQMQIFMDSTERFADAFDCIGFTTVPIWSGLMVSFIMLLGLAVSVCMI 1448
D Q+Q F RF A DC + GL +S I+LL LA ++ M+
Sbjct: 111 DGSSLWEVTFIDFQIQGFAIKGGRFTKAQDCASSFSPAFLIGLAMSLILLLVLAYALHML 170
Query: 1449 MDIKTMDR 1456
+ ++ +D+
Sbjct: 171 IYLRYLDQ 178
>BC093982-1|AAH93982.1| 224|Homo sapiens hypothetical protein
LOC92270 protein.
Length = 224
Score = 33.5 bits (73), Expect = 5.8
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 22/128 (17%)
Query: 1344 WWTAVGVEVIFGSLETSGLNLKAPAPPDAPSAVLGRSYHCSQPLVYTSDEAILRLP---- 1399
W++ VE+I S +++A P A G SY C + D+A+L LP
Sbjct: 58 WFSLRRVEII------SNNSIQAVFNPTGVYAPSGYSYRCQRVGSLQQDQALL-LPSDTD 110
Query: 1400 -----------DVQMQIFMDSTERFADAFDCIGFTTVPIWSGLMVSFIMLLGLAVSVCMI 1448
D Q+Q F RF A DC + GL +S I+LL LA ++ M+
Sbjct: 111 DGSSLWEVTFIDFQIQGFAIKGGRFTKAQDCASSFSPAFLIGLAMSLILLLVLAYALHML 170
Query: 1449 MDIKTMDR 1456
+ ++ +D+
Sbjct: 171 IYLRYLDQ 178
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.137 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,479,659
Number of Sequences: 224733
Number of extensions: 10150275
Number of successful extensions: 22440
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 22430
Number of HSP's gapped (non-prelim): 11
length of query: 1471
length of database: 73,234,838
effective HSP length: 99
effective length of query: 1372
effective length of database: 50,986,271
effective search space: 69953163812
effective search space used: 69953163812
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 72 (33.1 bits)
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