GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002310-TA|BGIBMGA002310-PA|undefined
         (1488 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    38   0.003
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.69 
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    28   1.6  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    27   3.7  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    26   8.5  

>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
            protein.
          Length = 400

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 28/142 (19%), Positives = 67/142 (47%), Gaps = 10/142 (7%)

Query: 1206 EEIIQKSKRNRKTTVESPKESRAAKPAVENEPKTRGRRIITERQNEDDKPKRGRNTKTDD 1265
            +++ QKS +  +     P E     P V   P+TR  R+  E +  D+  ++ R+ + + 
Sbjct: 92   KQLKQKSTQEIEVQTAQPSELAEDAPFV---PQTRKGRVPKEARKRDNNARQ-RSAQRET 147

Query: 1266 TTKVSKEDNLPKTRRSKLKVPEKQPVTRGKAKNVEVPASEITQKSTRGKKLEPQESVQSE 1325
                  +   PK ++ K  +P+ + V   K +N+++  +++ +  T    L+       +
Sbjct: 148  PKSSGGQSKQPKKKKKKRSLPKPEAVVIEKCENIDL--AKVLKGLTHDDALKD----VGD 201

Query: 1326 PVRQTRRVRNDNTVIPEQKGRK 1347
             V + RR +N + ++  ++G++
Sbjct: 202  QVAKVRRTQNGDMLLVLKRGKE 223


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 29.5 bits (63), Expect = 0.69
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 1035 ESDTTVAASRPIEDEPARPPPKQRGRRTTNPKIEKPAT 1072
            + DT  A        P  PP  +R RRT+ P +   AT
Sbjct: 1199 QGDTATALDEVALPAPPAPPTSKRDRRTSGPAVSDAAT 1236


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doublesex
            protein protein.
          Length = 622

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 4/101 (3%)

Query: 1192 AKRNAAQIDKANSVEEIIQKSKRNRKTTVES----PKESRAAKPAVENEPKTRGRRIITE 1247
            A R+A ++ +  S  +  + S+    T   S    P E  +   ++        R  I  
Sbjct: 343  ASRSATRMSRGRSRSQTKRYSQTVESTNAPSRSPGPDEEPSVYKSLAEAASKMARSFIPA 402

Query: 1248 RQNEDDKPKRGRNTKTDDTTKVSKEDNLPKTRRSKLKVPEK 1288
            R+ ED      ++ + +D      E  L   RRSK   P K
Sbjct: 403  REPEDLHTTTHKSPEREDNPSQPYEAYLESVRRSKKSFPHK 443


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 10/34 (29%), Positives = 23/34 (67%)

Query: 619 TVKNSRAGLKSKSLNVSAMRAVLRSMKGSPNNSD 652
           T++  +A  +S +++ +    +L+++KG+PN SD
Sbjct: 48  TIRKPQANRRSGTVDQNLRSKILKTIKGNPNLSD 81


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 15/68 (22%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 654 TDEDAPQPDDEEVITPKSAVKPVQEAVKNKHSTAKKPQSKRSIIDDLNKSDIVKELFNSP 713
           T+ D+ +  ++++    S+   +Q A  +  S++KK  S+R+   +L+ +D++ +  +S 
Sbjct: 75  TEPDSNKCSNQQLANTGSSNTQLQAAASS--SSSKKNSSRRNAWGNLSYADLITQAISSA 132

Query: 714 VKRKLSQS 721
              +L+ S
Sbjct: 133 SDSRLTLS 140


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.307    0.123    0.327 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,206,319
Number of Sequences: 2123
Number of extensions: 45299
Number of successful extensions: 139
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 133
Number of HSP's gapped (non-prelim): 9
length of query: 1488
length of database: 516,269
effective HSP length: 73
effective length of query: 1415
effective length of database: 361,290
effective search space: 511225350
effective search space used: 511225350
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 54 (25.8 bits)