Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002309-TA|BGIBMGA002309-PA|IPR004301|Nucleoplasmin
(187 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5N9 Cluster: Nucleoplasmin isoform 2; n=7; Endoptery... 263 2e-69
UniRef50_A2I421 Cluster: Nucleoplasmin isoform 1-like protein; n... 105 6e-22
UniRef50_Q27415 Cluster: Nucleoplasmin-like protein; n=4; Sophop... 102 6e-21
UniRef50_Q9VAC4 Cluster: CG7911-PA; n=2; Sophophora|Rep: CG7911-... 96 4e-19
UniRef50_UPI00015B5EC5 Cluster: PREDICTED: similar to nucleoplas... 89 8e-17
UniRef50_P91753 Cluster: Mitotic apparatus protein p62; n=3; Ech... 69 7e-11
UniRef50_Q8WSV9 Cluster: Nucleolar protein; n=2; Patiria pectini... 60 2e-08
UniRef50_A7TZ48 Cluster: Nucleoplasmin-like protein; n=1; Lepeop... 52 1e-05
UniRef50_A7RZK8 Cluster: Predicted protein; n=1; Nematostella ve... 48 1e-04
UniRef50_O42584 Cluster: Nucleoplasmin-like protein NO29; n=7; E... 48 1e-04
UniRef50_O75607 Cluster: Nucleoplasmin-3; n=18; Amniota|Rep: Nuc... 48 2e-04
UniRef50_Q4RQH0 Cluster: Chromosome 17 SCAF15006, whole genome s... 40 0.036
UniRef50_Q0P4A5 Cluster: LOC555786 protein; n=3; Danio rerio|Rep... 40 0.036
UniRef50_UPI0000E8152F Cluster: PREDICTED: similar to nucleophos... 38 0.15
UniRef50_P05221 Cluster: Nucleoplasmin; n=6; Anura|Rep: Nucleopl... 37 0.25
UniRef50_Q80W85 Cluster: Nucleoplasmin-2; n=9; Eutheria|Rep: Nuc... 34 1.8
UniRef50_Q6NVH6 Cluster: NPM2 protein; n=2; Homo sapiens|Rep: NP... 34 2.4
UniRef50_Q86SE8 Cluster: Nucleoplasmin-2; n=7; Mammalia|Rep: Nuc... 34 2.4
UniRef50_UPI00015C4237 Cluster: sensor histidine kinase; n=1; St... 33 3.1
UniRef50_Q6L985 Cluster: Synphilin-1b protein; n=8; Catarrhini|R... 32 7.3
UniRef50_Q9Y6H5 Cluster: Synphilin-1; n=38; Tetrapoda|Rep: Synph... 32 7.3
>UniRef50_Q2F5N9 Cluster: Nucleoplasmin isoform 2; n=7;
Endopterygota|Rep: Nucleoplasmin isoform 2 - Bombyx mori
(Silk moth)
Length = 187
Score = 263 bits (644), Expect = 2e-69
Identities = 137/187 (73%), Positives = 137/187 (73%)
Query: 1 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 60
MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL
Sbjct: 1 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 60
Query: 61 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPVXXXXXXXXXXXXXXXXXXX 120
QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV
Sbjct: 61 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPVHLIGHHLLGALLEEFEDME 120
Query: 121 XXXXXXXXXXXXXXSQFKEDENKRKGAGKRXXXXXXXXXXXXXXXXXAKMSNNAKGKAAS 180
SQFKEDENKRKGAGKR AKMSNNAKGKAAS
Sbjct: 121 EMEEEMLDEEEGDDSQFKEDENKRKGAGKRKPNEDEDNEEGEPKGKKAKMSNNAKGKAAS 180
Query: 181 PKKNAKK 187
PKKNAKK
Sbjct: 181 PKKNAKK 187
>UniRef50_A2I421 Cluster: Nucleoplasmin isoform 1-like protein; n=1;
Maconellicoccus hirsutus|Rep: Nucleoplasmin isoform
1-like protein - Maconellicoccus hirsutus (hibiscus
mealybug)
Length = 176
Score = 105 bits (252), Expect = 6e-22
Identities = 48/108 (44%), Positives = 72/108 (66%), Gaps = 7/108 (6%)
Query: 1 MTDEFFYGVTLSSSHQSETWDPEAKAE-------YPRSNKLVIRQALLGPDAKPDELNVI 53
MT+++F+G+TL + S+ WDP+ K + Y + L+++QA+LGP+AK E+NV+
Sbjct: 1 MTEDYFWGLTLDKNKTSDLWDPDVKNDANDSTQGYRGEHTLLVKQAVLGPEAKDGEINVV 60
Query: 54 QVEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
+VEAM + VK P+ VLK G LD+ FPD PVTF L++GSGP+
Sbjct: 61 EVEAMGYKSDVKYPITVLKGGSQHQSLLDLLFPDPPVTFKLIKGSGPI 108
>UniRef50_Q27415 Cluster: Nucleoplasmin-like protein; n=4;
Sophophora|Rep: Nucleoplasmin-like protein - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 102 bits (244), Expect = 6e-21
Identities = 50/101 (49%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 1 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 60
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56
Query: 61 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
+++V++P+AVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 57 KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>UniRef50_Q9VAC4 Cluster: CG7911-PA; n=2; Sophophora|Rep: CG7911-PA
- Drosophila melanogaster (Fruit fly)
Length = 156
Score = 96.3 bits (229), Expect = 4e-19
Identities = 52/107 (48%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 1 MTDEFFYGVTLSSSHQSETWD-PEAKAEY-PRSNKLVIRQALLGPDAKPDELNVIQVEAM 58
M E FYGVTLS ++ P+ EY S+KL+I+Q LGP+AK E NV+Q E
Sbjct: 1 MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTGEFNVVQAETN 60
Query: 59 ----SLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
++ +K+P+AVLKVGE+R +R ++EFP+ VTF LVQGSGPV
Sbjct: 61 INDDGEKKTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKLVQGSGPV 107
>UniRef50_UPI00015B5EC5 Cluster: PREDICTED: similar to
nucleoplasmin-like protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to
nucleoplasmin-like protein - Nasonia vitripennis
Length = 141
Score = 88.6 bits (210), Expect = 8e-17
Identities = 38/63 (60%), Positives = 53/63 (84%)
Query: 39 ALLGPDAKPDELNVIQVEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGS 98
ALLGP+AK ELNV+QVEAM L+ +K+P+A+L++G++ + LD+ FPD PVTFTL++GS
Sbjct: 2 ALLGPEAKAGELNVLQVEAMGLKGPIKIPIALLEMGKTSQIILDLSFPDPPVTFTLIKGS 61
Query: 99 GPV 101
GPV
Sbjct: 62 GPV 64
>UniRef50_P91753 Cluster: Mitotic apparatus protein p62; n=3;
Echinacea|Rep: Mitotic apparatus protein p62 -
Lytechinus pictus (Painted sea urchin)
Length = 411
Score = 68.9 bits (161), Expect = 7e-11
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 10/110 (9%)
Query: 1 MTDEFFYGVTLSSSHQSETWDPEAK--------AEYPRSNKLVIRQALLGPDAKPDELNV 52
M E+F+G TLS + WDPE+ E S+ L ++QA+LG +AK D+ NV
Sbjct: 1 MAKEYFWGATLSKDKKIFKWDPESDFLDDEDDDEEDSISHFLFLKQAVLGVNAKDDDRNV 60
Query: 53 IQVEAMSLQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
I+VE ++ E V P+ L++G + LDI PVTF L GSGPV
Sbjct: 61 IEVETINFDGETVIQPLLSLRLGLNESTNLDIGL-QPPVTFKLALGSGPV 109
>UniRef50_Q8WSV9 Cluster: Nucleolar protein; n=2; Patiria
pectinifera|Rep: Nucleolar protein - Asterina
pectinifera (Starfish)
Length = 346
Score = 60.5 bits (140), Expect = 2e-08
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 1 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNK--------LVIRQALLGPDAKPDELNV 52
M+ EFF+G +L+ + + W+P E N L ++QA+LG AK E NV
Sbjct: 1 MSKEFFWGDSLTGTKKEVKWNPSLDDEDDFDNLDSDGIQHFLFLKQAVLGATAKEGERNV 60
Query: 53 IQVEAMSLQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
+++E + + VK P+ LK+G + LDI PVTF L GSGPV
Sbjct: 61 VEIETENFDGDNVKQPLFSLKLGLNESSPLDIGI-QPPVTFILTAGSGPV 109
>UniRef50_A7TZ48 Cluster: Nucleoplasmin-like protein; n=1;
Lepeophtheirus salmonis|Rep: Nucleoplasmin-like protein
- Lepeophtheirus salmonis (salmon louse)
Length = 230
Score = 51.6 bits (118), Expect = 1e-05
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 3 DEFFYGVTLSSSHQSETWDP-EAKAEYPRSN---KLVIRQALLGPDAKP-DELNVIQVEA 57
+EF + TL + W P ++ +E + KL I+ A L AK DE N I++E
Sbjct: 6 EEFVWSATLDKKNPEHNWSPPDSDSEDIDDSIIHKLRIKNAFLSSKAKKEDEFNTIELET 65
Query: 58 MSL-QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
+E +K P+ ++K + +D+ F + V FTL +G+GP+
Sbjct: 66 TGYKEEEIKCPLVMMKSSSTSQCTVDLSF-NRSVKFTLTEGNGPI 109
>UniRef50_A7RZK8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 362
Score = 48.0 bits (109), Expect = 1e-04
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 4 EFFYGVTLSSSHQSETWDPEAKAEYPR----SNKLVIRQALLGPDAKPDELNVIQVEAMS 59
E F+G LS S + TW+PE E +KLV+ QA LG +K ++++V +M
Sbjct: 7 EDFWGCVLSKSEDTVTWNPEFDGEDTLLGQIEHKLVLSQACLG--SKATGKSMVEVTSMD 64
Query: 60 LQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
+ + + L+ G + L++ F PVTF L G+GPV
Sbjct: 65 FKGDDSTHTIVSLREGATEMCALNLAF-SPPVTFKLASGNGPV 106
>UniRef50_O42584 Cluster: Nucleoplasmin-like protein NO29; n=7;
Euteleostomi|Rep: Nucleoplasmin-like protein NO29 -
Xenopus laevis (African clawed frog)
Length = 183
Score = 48.0 bits (109), Expect = 1e-04
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 3 DEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQ- 61
+ + +G LSS + T+ E E + + ++ LG AK DE NV++V A + Q
Sbjct: 19 ESYLFGCELSSKTKQYTF--EVNEEDDAVHLVCLQTISLGAGAK-DEHNVVEVTAPNYQN 75
Query: 62 EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
+ V +P+A LK+ V + +APVTF L GSGPV
Sbjct: 76 KEVTVPLANLKLSCQPMVNVGYFEIEAPVTFRLTSGSGPV 115
>UniRef50_O75607 Cluster: Nucleoplasmin-3; n=18; Amniota|Rep:
Nucleoplasmin-3 - Homo sapiens (Human)
Length = 178
Score = 47.6 bits (108), Expect = 2e-04
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 3 DEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQ- 61
D FF+G LS +S T+ E + + + L + L AK DE NV++V A +
Sbjct: 35 DSFFFGCELSGHTRSFTFKVEEEDD--AEHVLALTMLCLTEGAK-DECNVVEVVARNHDH 91
Query: 62 EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
+ + +PVA LK+ + LD PVTF L GSGPV
Sbjct: 92 QEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSGSGPV 131
>UniRef50_Q4RQH0 Cluster: Chromosome 17 SCAF15006, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 17
SCAF15006, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 173
Score = 39.9 bits (89), Expect = 0.036
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 3 DEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQ- 61
+ F + LSS T+ + + + + L +R LG AK +E NV++V AM+ Q
Sbjct: 19 ESFLFSCELSSKVPFYTFQGDEEEDL--EHFLELRTICLGEGAK-EESNVVEVTAMNHQG 75
Query: 62 EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
+ + +P+A L V V L APVT L G GPV
Sbjct: 76 KTISVPIANLHVNCLPMVSLGEFELKAPVTIRLKAGGGPV 115
>UniRef50_Q0P4A5 Cluster: LOC555786 protein; n=3; Danio rerio|Rep:
LOC555786 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 178
Score = 39.9 bits (89), Expect = 0.036
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 7 YGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQ-VEAMSLQEAVK 65
+G L+ S++ E++ + + ++L +R LG AK DE N+++ V A
Sbjct: 35 WGCELNESNKEESFKTD---DTNHQHQLALRTMCLGHTAK-DEFNIVELVTGEGNSNAKA 90
Query: 66 LPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
+P+A L V L PVTF L GSGPV
Sbjct: 91 VPIATLHAKSMPTVNLSGLDLHPPVTFRLKHGSGPV 126
>UniRef50_UPI0000E8152F Cluster: PREDICTED: similar to
nucleophosmin/nucleoplasmin, 2; n=2; Gallus gallus|Rep:
PREDICTED: similar to nucleophosmin/nucleoplasmin, 2 -
Gallus gallus
Length = 134
Score = 37.9 bits (84), Expect = 0.15
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 34 LVIRQALLGPDAKPDELNVIQVEAMSLQEAVK-LPVAVLKVGESRHVRLD-IEFPDAPVT 91
+++R LG DA+ DEL+V+ VE+ + K +P+A L+V + L +EF PVT
Sbjct: 27 VLLRTISLGADAR-DELHVVAVESKNTYGDHKPVPIASLRVSVLPMISLKGLEFVP-PVT 84
Query: 92 FTLVQGSGPV 101
F L G+GPV
Sbjct: 85 FMLQCGTGPV 94
>UniRef50_P05221 Cluster: Nucleoplasmin; n=6; Anura|Rep:
Nucleoplasmin - Xenopus laevis (African clawed frog)
Length = 200
Score = 37.1 bits (82), Expect = 0.25
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 21 DPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQEAVKLPVAVLKVG-ESRHV 79
D E K E+ +L +R LG AK DE N++++ +P+A LK
Sbjct: 36 DDEEKCEH----QLALRTVCLGDKAK-DEFNIVEIVTQEEGAEKSVPIATLKPSILPMAT 90
Query: 80 RLDIEFPDAPVTFTLVQGSGPV 101
+ IE PVTF L GSGP+
Sbjct: 91 MVGIEL-TPPVTFRLKAGSGPL 111
>UniRef50_Q80W85 Cluster: Nucleoplasmin-2; n=9; Eutheria|Rep:
Nucleoplasmin-2 - Mus musculus (Mouse)
Length = 207
Score = 34.3 bits (75), Expect = 1.8
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 7 YGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQEAVKL 66
+G L+ Q+ T+ + E S KL++ LG AK +E+N +VE +S QE K
Sbjct: 19 WGSELNQEKQTCTF--RGQGEKKDSCKLLLSTICLGEKAK-EEVN--RVEVLS-QEGRKP 72
Query: 67 PV--AVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
P+ A LK V + PVTF L GSGPV
Sbjct: 73 PITIATLKASVLPMVTVSGIELSPPVTFRLRTGSGPV 109
>UniRef50_Q6NVH6 Cluster: NPM2 protein; n=2; Homo sapiens|Rep: NPM2
protein - Homo sapiens (Human)
Length = 136
Score = 33.9 bits (74), Expect = 2.4
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 14 SHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQEAVKL-PVAVLK 72
S + TW + E +S +L++ LG AK +E++ +++ + QE K+ PV +
Sbjct: 24 SQERRTWTFRPQLEGKQSCRLLLHTICLGEKAK-EEMHRVEILPPANQEDKKMQPVTIAS 82
Query: 73 VGESRHVRLDIEFPDA--PVTFTLVQGSGPV 101
+ S + + PVTF L GSGPV
Sbjct: 83 LQASVLPMVSMVGVQLSPPVTFQLRAGSGPV 113
>UniRef50_Q86SE8 Cluster: Nucleoplasmin-2; n=7; Mammalia|Rep:
Nucleoplasmin-2 - Homo sapiens (Human)
Length = 214
Score = 33.9 bits (74), Expect = 2.4
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 14 SHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQEAVKL-PVAVLK 72
S + TW + E +S +L++ LG AK +E++ +++ + QE K+ PV +
Sbjct: 24 SQERRTWTFRPQLEGKQSCRLLLHTICLGEKAK-EEMHRVEILPPANQEDKKMQPVTIAS 82
Query: 73 VGESRHVRLDIEFPDA--PVTFTLVQGSGPV 101
+ S + + PVTF L GSGPV
Sbjct: 83 LQASVLPMVSMVGVQLSPPVTFQLRAGSGPV 113
>UniRef50_UPI00015C4237 Cluster: sensor histidine kinase; n=1;
Streptococcus gordonii str. Challis substr. CH1|Rep:
sensor histidine kinase - Streptococcus gordonii str.
Challis substr. CH1
Length = 410
Score = 33.5 bits (73), Expect = 3.1
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 20 WDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQEAVKLPVAVLKVGESRHV 79
W KA+ R NKL+ R L + + L + V L E V + L E++H+
Sbjct: 227 WTESTKAQTERLNKLIARLIRLSRMEEHENLELTSVNLSELIEKVGKDHSSLIQQENKHL 286
Query: 80 RLDIEFPD 87
LD++ PD
Sbjct: 287 ELDVQ-PD 293
>UniRef50_Q6L985 Cluster: Synphilin-1b protein; n=8; Catarrhini|Rep:
Synphilin-1b protein - Homo sapiens (Human)
Length = 859
Score = 32.3 bits (70), Expect = 7.3
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 12 SSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQEAVKLPVAVL 71
S S SE+ +P+ +++YP S + Q P + Q A S + A+K P +
Sbjct: 687 SPSPTSESSEPDLESQYPGSGSIPPNQPSGDPQQPSPDSTAAQKVATSPKSALKSPSSKR 746
Query: 72 KVGESRHVRLDIEFP 86
+ ++ +R+ E P
Sbjct: 747 RTSQNLKLRVTFEEP 761
>UniRef50_Q9Y6H5 Cluster: Synphilin-1; n=38; Tetrapoda|Rep:
Synphilin-1 - Homo sapiens (Human)
Length = 919
Score = 32.3 bits (70), Expect = 7.3
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 12 SSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQEAVKLPVAVL 71
S S SE+ +P+ +++YP S + Q P + Q A S + A+K P +
Sbjct: 747 SPSPTSESSEPDLESQYPGSGSIPPNQPSGDPQQPSPDSTAAQKVATSPKSALKSPSSKR 806
Query: 72 KVGESRHVRLDIEFP 86
+ ++ +R+ E P
Sbjct: 807 RTSQNLKLRVTFEEP 821
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.310 0.127 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,259,611
Number of Sequences: 1657284
Number of extensions: 4051597
Number of successful extensions: 6590
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6566
Number of HSP's gapped (non-prelim): 23
length of query: 187
length of database: 575,637,011
effective HSP length: 96
effective length of query: 91
effective length of database: 416,537,747
effective search space: 37904934977
effective search space used: 37904934977
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 69 (31.9 bits)
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