GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002308-TA|BGIBMGA002308-PA|IPR006625|Insect
pheromone/odorant binding protein PhBP, IPR006170|Pheromone/general
odorant binding protein, PBP/GOBP
         (137 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.57 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   0.75 
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   0.75 
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    23   0.99 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   0.99 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   1.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   1.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   3.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    20   7.0  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    20   9.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          20   9.2  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 0.57
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 82  VVDVEAVLSLLPDSLKTKNEASLKKCDTQKGSDDCDTAYLTQIC 125
           V  ++A      D  K + + +  KC  ++G+  CD    T  C
Sbjct: 468 VPTLDATSYYAKDLEKQRQQCNQNKCPVKRGNGRCDEECNTYAC 511


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 0.75
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 7/61 (11%)

Query: 51  NAGTDLATITDGKLKCYIKCTMETAGMMSDGVVDVEAVLSLLPDSLKTKNEASLKKCDTQ 110
           N   D    +D  LK Y+ C +E      DG      +   LPD+L T  E S K  +TQ
Sbjct: 30  NVDLDEIIKSDRLLKNYVNCLLEKGKCTPDGA----ELKRHLPDALHT--ECS-KCSETQ 82

Query: 111 K 111
           K
Sbjct: 83  K 83


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 0.75
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 9/74 (12%)

Query: 51  NAGTDLATITDGKLKCYIKCTMETAGMMSDGVVDVEAVLSLLPDSLKTKNEASLKKCD-T 109
           N   D     D  L  YIKC M+     S+G      +   LPD+L     +   KC+  
Sbjct: 29  NVDVDKILNNDRVLTNYIKCLMDEGPCTSEG----RELKKTLPDAL----SSGCTKCNQK 80

Query: 110 QKGSDDCDTAYLTQ 123
           QK + +    +LTQ
Sbjct: 81  QKETAEKVIRHLTQ 94


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
          protein 10 protein.
          Length = 129

 Score = 23.0 bits (47), Expect = 0.99
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)

Query: 60 TDGKLKCYIKCTMETAGMMSDGVVDVEAVLSLLPDSL 96
          +D  LK Y  C ME      DG    E +   LPD+L
Sbjct: 39 SDRLLKNYFNCLMERGTCSPDG----EELKKALPDAL 71


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 0.99
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 15/73 (20%)

Query: 64  LKCYIKCTMETAGMMSDGVVDVEAVLSLLPDSLKTKNEASLKKC-DTQKGSDDCDTAYLT 122
           LK Y+ C +E      DG+     +   +PD+++T       KC + QK   D    YL 
Sbjct: 45  LKSYVDCLLEKGRCSPDGL----ELKKNMPDAIET----DCSKCSEKQKEGSDFIMRYLI 96

Query: 123 QICWQAANKADYF 135
                  NK DY+
Sbjct: 97  D------NKPDYW 103


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 100 NEASLKKCDTQKGSDDCDTAYLTQIC 125
           N A LK C      D  D  +LT+ C
Sbjct: 47  NVAELKTCGNGLAFDASDPKFLTENC 72


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 100 NEASLKKCDTQKGSDDCDTAYLTQIC 125
           N A LK C      D  D  +LT+ C
Sbjct: 47  NVAELKTCGNGLAFDASDPKFLTENC 72


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 14/57 (24%), Positives = 22/57 (38%)

Query: 2   AVHIFLILASYMALAAHGQLDDEIAELAAMVRENCADESSVDLNLVEKVNAGTDLAT 58
           AV  +L   + MA   HG+ + E    A +   +   +    LN+    N    L T
Sbjct: 266 AVSSYLDFINLMAYDFHGKWERETGHNAPLYSPSSDSQYQKQLNVEHAANLWVKLGT 322


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory
          receptor candidate 57 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 9/18 (50%), Positives = 15/18 (83%), Gaps = 1/18 (5%)

Query: 3  VHIFLILASYMALAAHGQ 20
          VHIF+I+A Y A +++G+
Sbjct: 31 VHIFIIIALY-AHSSYGR 47


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query: 90  SLLPDSLKTKNEASLKKC 107
           S+ P S  + N AS K C
Sbjct: 159 SMSPQSTSSNNSASPKAC 176


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query: 90  SLLPDSLKTKNEASLKKC 107
           S+ P S  + N AS K C
Sbjct: 179 SMSPQSTSSNNSASPKAC 196


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.130    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,221
Number of Sequences: 317
Number of extensions: 878
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 137
length of database: 114,650
effective HSP length: 51
effective length of query: 86
effective length of database: 98,483
effective search space:  8469538
effective search space used:  8469538
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)