Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002308-TA|BGIBMGA002308-PA|IPR006625|Insect
pheromone/odorant binding protein PhBP, IPR006170|Pheromone/general
odorant binding protein, PBP/GOBP
(137 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 26 2.4
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom... 25 3.2
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 25 4.2
SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein Vps33|S... 25 4.2
SPAPB8E5.02c |rpn502|rpn5, rpn5-b|19S proteasome regulatory subu... 24 7.3
SPAC2G11.07c |ptc3||protein phosphatase 2C Ptc3|Schizosaccharomy... 24 7.3
SPAC1420.03 |rpn501|rpn5-a, rpn5|19S proteasome regulatory subun... 24 7.3
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 24 9.7
SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces... 24 9.7
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 2.4
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 81 GVVDVEAVLSLLPDSLKTKNEASLKKCDTQKGSDDCDTAYLTQICWQAANK-ADY 134
G D+ +++ L ++ NEAS + D SDD +Y + AAN+ DY
Sbjct: 232 GKPDLSSLIRLTRSRARSSNEASYVEKDESSNSDD-SISYKRRRSRNAANRITDY 285
>SPAC22A12.11 |dak1||dihydroxyacetone kinase
Dak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 25.4 bits (53), Expect = 3.2
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 83 VDVEAVLSLLPDSLKT--KNEASLKKCDTQKGSDDCDT 118
VD E V + +S++ K E + K DT G DC T
Sbjct: 381 VDKEKVRQAIVNSMENLIKAEPKITKFDTMAGDGDCGT 418
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 25.0 bits (52), Expect = 4.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 92 LPDSLKTKNEASLKKCDTQKGSDDCDTAYLT 122
+P K + E +L CD++K +DD + + T
Sbjct: 556 MPKVNKEETEPTLPVCDSEKENDDLECYFRT 586
>SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein
Vps33|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 25.0 bits (52), Expect = 4.2
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 26 AELAAMVRENCADESSVDLNLVE-KVNAGTDLATITDGKLKCYIK-CTMETAGMMSDGVV 83
A++ ++ + +E++++ VE +++A D + D L T T D ++
Sbjct: 182 AKMLELLEKTYQEEATINFGKVEGEISALYDSVLLVDRSLDRITPFLTQLTYFGFLDEIL 241
Query: 84 DVEAVLSLLPDSLKTKNEAS 103
++ + LP SL +NEAS
Sbjct: 242 GIQQMNVKLPSSLVNRNEAS 261
>SPAPB8E5.02c |rpn502|rpn5, rpn5-b|19S proteasome regulatory subunit
Rpn502|Schizosaccharomyces pombe|chr 1|||Manual
Length = 443
Score = 24.2 bits (50), Expect = 7.3
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 18 HGQLDDEIAELAAMVRENCADESSVDLNLVEKVNAGTDLATITDGKL 64
HGQL + L V +D +L K+N L TITDGK+
Sbjct: 82 HGQLKQSMTSLVQHVMTYLP---GID-DLKTKINLIETLRTITDGKI 124
>SPAC2G11.07c |ptc3||protein phosphatase 2C Ptc3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 24.2 bits (50), Expect = 7.3
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 22 DDEIAELAAMVRENCADESSVDLNLVEKVNAGTDLATITDGKLKCYIKCTMETAGMMSDG 81
DDE LA +C V + + AGT L I + + I ET G+ D
Sbjct: 221 DDEFVVLACDGIWDCKTSQQVIEFVRRGIVAGTSLEKIAENLMDNCIASDTETTGLGCDN 280
Query: 82 VVDVEAVLSLLPDSLKT 98
+ +++LL ++ K+
Sbjct: 281 M--TVCIVALLQENDKS 295
>SPAC1420.03 |rpn501|rpn5-a, rpn5|19S proteasome regulatory subunit
Rpn501|Schizosaccharomyces pombe|chr 1|||Manual
Length = 443
Score = 24.2 bits (50), Expect = 7.3
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 18 HGQLDDEIAELAAMVRENCADESSVDLNLVEKVNAGTDLATITDGKL 64
HGQL + L V +D +L K+N L TITDGK+
Sbjct: 82 HGQLKQSMTSLVQHVMTYLP---GID-DLKTKINLIETLRTITDGKI 124
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 23.8 bits (49), Expect = 9.7
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 23 DEIAELAAMVRENCADESSVDLNLVEKVNAGTDLATITD 61
D+++ ++V + ES LV+ +NA L T+T+
Sbjct: 680 DKLSHYISVVTQQSPIESRFTDRLVDNLNAEVSLGTVTN 718
>SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 658
Score = 23.8 bits (49), Expect = 9.7
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 115 DCDTAYLTQICWQAANK 131
DC + +ICW AN+
Sbjct: 610 DCGHCKMAEICWNLANR 626
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.130 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,629
Number of Sequences: 5004
Number of extensions: 18371
Number of successful extensions: 60
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 56
Number of HSP's gapped (non-prelim): 9
length of query: 137
length of database: 2,362,478
effective HSP length: 66
effective length of query: 71
effective length of database: 2,032,214
effective search space: 144287194
effective search space used: 144287194
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)
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