Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002308-TA|BGIBMGA002308-PA|IPR006625|Insect
pheromone/odorant binding protein PhBP, IPR006170|Pheromone/general
odorant binding protein, PBP/GOBP
(137 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1030 - 30249160-30250403,30250787-30251666 33 0.062
04_04_1318 + 32608441-32608833,32608953-32608997,32609092-326091... 30 0.76
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 30 0.76
02_01_0516 + 3727742-3727936,3729115-3729192,3729292-3729552,372... 29 1.3
12_02_0034 - 12539201-12540439 28 2.3
09_04_0725 + 19749227-19749361,19749705-19749772,19749869-197499... 28 2.3
04_03_0241 - 13243938-13244453,13244538-13246334 27 4.0
11_05_0065 + 18766566-18766576,18767023-18767083,18767170-187672... 27 5.3
09_06_0119 - 20969450-20969643,20969767-20970088,20970147-209703... 27 5.3
08_02_1557 + 27867977-27869134 27 5.3
03_05_0412 + 23993452-23994068,23996249-23996350,23996799-239969... 27 7.1
01_06_1610 - 38625427-38625726,38625814-38625885,38626001-386261... 27 7.1
03_05_0503 - 24952770-24953846,24953961-24954641,24954730-249548... 26 9.3
>04_04_1030 - 30249160-30250403,30250787-30251666
Length = 707
Score = 33.5 bits (73), Expect = 0.062
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 64 LKCYIKCTMETAGMMSDGVVDVEAVLSLLPDSLKTKNEASLKKCDTQKGSDDCDTAYLTQ 123
LKC +K E M + +++EA+ L+ L K+E +L++ Q+ ++DC L Q
Sbjct: 610 LKC-LKLKGEERPRMVEVAIELEALRRLMKQHLSLKSEKALRELMEQQSAEDCQEMQLLQ 668
>04_04_1318 +
32608441-32608833,32608953-32608997,32609092-32609130,
32609382-32609552,32610042-32610194,32610362-32610397,
32611123-32611184,32611590-32611680,32611767-32611808,
32611904-32612012,32612161-32612275,32612354-32612403,
32612577-32612655,32612763-32612813,32612966-32613107,
32613315-32613359,32613634-32613741,32613843-32613884,
32614388-32614570,32614932-32615135
Length = 719
Score = 29.9 bits (64), Expect = 0.76
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 59 ITDGKLKCYIKCTMETAGMMSDGVVDVEAVLSLLPDSLKTKNEASLKKCDTQKGSD 114
+TD K ++ T++T + DG ++ + SLL +SL+ + E SL + D Q+ +D
Sbjct: 509 LTDSSPK--LRSTLQTL-LYKDGTFQIDRLESLLTESLRARTEQSLTR-DQQEETD 560
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 29.9 bits (64), Expect = 0.76
Identities = 13/69 (18%), Positives = 33/69 (47%)
Query: 55 DLATITDGKLKCYIKCTMETAGMMSDGVVDVEAVLSLLPDSLKTKNEASLKKCDTQKGSD 114
++ + TD + Y + + G+ S+ + ++ D + +N + +K+C+ +
Sbjct: 452 EMFSSTDAYMLMYKRIAKDENGIESNNISSNNSLPHHFVDEIDERNTSYVKECEEYESKK 511
Query: 115 DCDTAYLTQ 123
D AY+T+
Sbjct: 512 DVHLAYITE 520
>02_01_0516 +
3727742-3727936,3729115-3729192,3729292-3729552,
3729921-3730238,3730527-3730685,3730768-3730961,
3731644-3731647
Length = 402
Score = 29.1 bits (62), Expect = 1.3
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 32 VRENCADESSVDL--NLVEKVNA-GTDLATITDGKLKCYIKCTMETAGMMSDGVVDVEAV 88
V ++ +E ++L +L+EK A G L TD + E+ + + + D
Sbjct: 238 VGKSLVEEDKLELATSLIEKAKAKGVSLLLPTDVVVADKFAADAESKTVAASAIPDGWMG 297
Query: 89 LSLLPDSLKTKNEASLKKCDT 109
L + PD++KT +EA L C+T
Sbjct: 298 LDVGPDAIKTSSEA-LDTCNT 317
>12_02_0034 - 12539201-12540439
Length = 412
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 82 VVDVEAVLSLL-PDSLKTKNEASLKKCDTQKGSDDCDTAYLTQICW 126
VV ++ SL P L K + + + +DDCD ++CW
Sbjct: 358 VVAIKEAPSLFAPLCLMAKGSSKVTSLSDSESNDDCDDVSYDELCW 403
>09_04_0725 +
19749227-19749361,19749705-19749772,19749869-19749938,
19750244-19751482,19755359-19755423,19755502-19755655,
19755725-19755733
Length = 579
Score = 28.3 bits (60), Expect = 2.3
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 30 AMVRENCADESSVDL-NLVEKVNAGTDLATITDGKLKCYIKCTMETAGMMSDG---VVDV 85
A V + + E+S N+VE V TD+ + + K+ K + E M +G VVD+
Sbjct: 150 AKVDDEISPETSYQAPNVVETV---TDIGSGSSHKISENAKSSFEFFVMSDEGLDLVVDL 206
Query: 86 EAVLSLLPDSLKTKNEASLKKCDTQKGS 113
+ S+L DSLK + C ++ G+
Sbjct: 207 NSTPSMLLDSLKKEVFIPSSTCRSEPGN 234
>04_03_0241 - 13243938-13244453,13244538-13246334
Length = 770
Score = 27.5 bits (58), Expect = 4.0
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 8 ILASYMALAAHGQLDDEIAELAAMVRENCADESSVDLNLVEKVNAGTDLA 57
+LA Y+A+ L IA L A+ + D+ + +LVE V G D A
Sbjct: 712 VLAQYVAMFEGPLLQHTIAALTAVFGIDIEDDDNPTDSLVEMVGEGVDEA 761
>11_05_0065 +
18766566-18766576,18767023-18767083,18767170-18767268,
18767346-18767467,18767577-18767673,18767778-18767824,
18768020-18768203,18768349-18768400,18768795-18768985,
18769072-18770020,18770866-18771022,18771134-18771206,
18771292-18771465,18771880-18771993,18772110-18772236,
18772331-18772443,18772614-18772729,18772847-18773000
Length = 946
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 88 VLSLLPDSLKTKNEASLKKCDTQKGSD 114
V+S LPD +K E L CDT SD
Sbjct: 341 VISSLPDKPSSKLEEFLSSCDTDLTSD 367
>09_06_0119 -
20969450-20969643,20969767-20970088,20970147-20970380,
20970659-20970789,20970874-20971147
Length = 384
Score = 27.1 bits (57), Expect = 5.3
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 57 ATITDGKLKCYIKCTMETAGMMSDGVVDVEAVL-SLLPDSLKTKNEASLKKC 107
A + + KL+ I C ET + S G VD+ VL ++ D K + S + C
Sbjct: 278 ARLFNAKLEQEIGCLRETLQLQSIGYVDIYGVLDDMIADPGKYGFDVSTRGC 329
>08_02_1557 + 27867977-27869134
Length = 385
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 82 VVDVEAVLSLLPDSLKTKNEASLKKCDTQKGSDDCD 117
+ VE + ++ +L +E L CDT+ G+ CD
Sbjct: 166 IAAVEGINAIRTSNLTALSEQQLVDCDTKTGNAGCD 201
>03_05_0412 +
23993452-23994068,23996249-23996350,23996799-23996994,
23997075-23997259,23997394-23997498,23997625-23997722,
23997832-23998067,23998314-23998382,23999768-23999833,
24000513-24000611,24000688-24000750
Length = 611
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 35 NCADESSVDLNLVEKVNAGTDLATITDG 62
NC + S + L ++ N TDL T+ DG
Sbjct: 308 NCPNMSEISLCFTQQSNDCTDLVTLMDG 335
>01_06_1610 -
38625427-38625726,38625814-38625885,38626001-38626117,
38626509-38626674,38626768-38626815,38626889-38626962,
38627126-38627243,38627332-38627420,38627512-38627687,
38627785-38627898,38627981-38628051,38628431-38628477,
38628581-38628721,38629095-38629136
Length = 524
Score = 26.6 bits (56), Expect = 7.1
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 15 LAAHGQLDDEIAELAAMVRENCADESSVDLNLVEKVNAGTDLATITDGKLK 65
LAA G E E+ + +N +ESS D + E+ N D + G LK
Sbjct: 347 LAASGFTRKEQVEMDKYIDQNAEEESSDDDSTSEQDNEDGDDVAVKIGSLK 397
>03_05_0503 -
24952770-24953846,24953961-24954641,24954730-24954882,
24955041-24955043
Length = 637
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 95 SLKTKNEASLKKCDTQKGSDDCD 117
SLK K E LKK ++G DD D
Sbjct: 242 SLKAKGEPLLKKAYGEEGGDDID 264
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.130 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,508,373
Number of Sequences: 37544
Number of extensions: 119445
Number of successful extensions: 337
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 328
Number of HSP's gapped (non-prelim): 13
length of query: 137
length of database: 14,793,348
effective HSP length: 75
effective length of query: 62
effective length of database: 11,977,548
effective search space: 742607976
effective search space used: 742607976
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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