BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002308-TA|BGIBMGA002308-PA|IPR006625|Insect
pheromone/odorant binding protein PhBP, IPR006170|Pheromone/general
odorant binding protein, PBP/GOBP
(137 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 58 3e-11
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 58 3e-11
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 58 3e-11
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 51 5e-09
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 39 2e-05
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 38 4e-05
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 33 8e-04
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 25 0.38
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 25 0.38
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 21 4.7
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 58.4 bits (135), Expect = 3e-11
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 7 LILASYMALAAHGQLDDEIAELAAMVRENCADESSVDLNLVEKVNAGTDLATITDGKLKC 66
L L + AA + E+ +L A + C E ++ V+ G + + + C
Sbjct: 16 LCLHAIFVNAAPDWVPPEVFDLVAEDKARCMSEHGTTQAQIDDVDKGN---LVNEPSITC 72
Query: 67 YIKCTMETAGMMSDGV-VDVEAVLSLLPDSLKTKNEASLKKCDTQKGSDDCDTAYLTQIC 125
Y+ C +E ++ D VD + +L LLPD L+ + ++ + KC GSD+C+ Y C
Sbjct: 73 YMYCLLEAFSLVDDEANVDEDIMLGLLPDQLQERAQSVMGKCLPTSGSDNCNKIYNLAKC 132
Query: 126 WQAANKADYFLI 137
Q + +F+I
Sbjct: 133 VQESAPDVWFVI 144
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 58.4 bits (135), Expect = 3e-11
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 7 LILASYMALAAHGQLDDEIAELAAMVRENCADESSVDLNLVEKVNAGTDLATITDGKLKC 66
L L + AA + E+ +L A + C E ++ V+ G + + + C
Sbjct: 16 LCLHAIFVNAAPDWVPPEVFDLVAEDKARCMSEHGTTQAQIDDVDKGN---LVNEPSITC 72
Query: 67 YIKCTMETAGMMSDGV-VDVEAVLSLLPDSLKTKNEASLKKCDTQKGSDDCDTAYLTQIC 125
Y+ C +E ++ D VD + +L LLPD L+ + ++ + KC GSD+C+ Y C
Sbjct: 73 YMYCLLEAFSLVDDEANVDEDIMLGLLPDQLQERAQSVMGKCLPTSGSDNCNKIYNLAKC 132
Query: 126 WQAANKADYFLI 137
Q + +F+I
Sbjct: 133 VQESAPDVWFVI 144
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 58.0 bits (134), Expect = 3e-11
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 30 AMVRENCADESSVDLNLVEKVNAGTDLATITDGKLKCYIKCTMETAGMMSDGV-VDVEAV 88
A ++++C ES V ++K+ AG D+ D LKCY+KC M G++ VDV+
Sbjct: 23 ADIKKDCRKESKVSWAALKKMKAG-DMEQ-DDQNLKCYLKCFMTKHGILDKNAEVDVQKA 80
Query: 89 LSLLPDSLKTKNEASLKKCDTQKGSDDCDTAYLTQICW 126
L LP S++ + KC + + D C+ AY C+
Sbjct: 81 LRHLPRSMQDSTKKLFNKCKSIQNEDPCEKAYQLVKCY 118
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 50.8 bits (116), Expect = 5e-09
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Query: 3 VHIFLILASYMALAAHGQLDD--EIAELAAMVRENCADESSVDLNLVEKVNAGTDLATIT 60
V ++ L +AL +G++ D E E+ + R+ C E+ + VE G
Sbjct: 9 VSLYWYLILQIALV-YGEISDIDEFREMTSKYRKKCIGETKTTIEDVEATEYGE---FPE 64
Query: 61 DGKLKCYIKCTMETAGMM--SDGVVDVEAVLSLLPDSLKTKNEASLKKCDTQKGSDDCDT 118
D KLKCY C +E +M +G + + ++P++ K + C SD C+
Sbjct: 65 DEKLKCYFNCVLEKFNVMDKKNGKIRYNLLKKVIPEAFKEIGVEMIDSCSNVDSSDKCEK 124
Query: 119 AYLTQICWQAAN 130
+++ C N
Sbjct: 125 SFMFMKCMYEVN 136
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 38.7 bits (86), Expect = 2e-05
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 21 LDDEIAELAAMVRENCADESSVDLNLVEKVNAGTDLATITDGKLKCYIKCTMETAGMMSD 80
+ DE+ AA V C ++ V +E V G T +LKCY+ C E G++ D
Sbjct: 29 VSDEMIATAASVVNACQTQTGVATVDIEAVRNGQWPET---RQLKCYMYCLWEQFGLVDD 85
Query: 81 G-VVDVEAVLSLLP--DSLKTKNEASLKKCDTQKGSDDCDTAYLTQICWQAANKADYFL 136
+ + +L+ + + + + ++ +C D+C+ AY C+ + Y+L
Sbjct: 86 KRELSLNGMLTFFQRIPAYRAEVQKAISECKGIAKGDNCEYAYRFNKCYAELSPRTYYL 144
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 37.9 bits (84), Expect = 4e-05
Identities = 29/140 (20%), Positives = 59/140 (42%), Gaps = 9/140 (6%)
Query: 2 AVHIFLILASYMALAAHGQLD-DEIAELAAMVRENCADESSVDLNLVEKVNAGTDLATIT 60
+V + + + +++AL + D++ +LA +R++C + ++ LV+ + G
Sbjct: 5 SVLLLITIVTFVALKPVKSMSADQVEKLAKNMRKSCLQKIAITEELVDGMRRGE---FPD 61
Query: 61 DGKLKCYIKCTMETAGMMSDGVVDVEAVLSLL-----PDSLKTKNEASLKKCDTQKGSDD 115
D L+CY C M+ +G D + ++ L P+ + E + + DD
Sbjct: 62 DHDLQCYTTCIMKLLRTFKNGNFDFDMIVKQLEITMPPEEVVIGKEIVAVCRNEEYTGDD 121
Query: 116 CDTAYLTQICWQAANKADYF 135
C Y C N +F
Sbjct: 122 CQKTYQYVQCHYKQNPEKFF 141
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 33.5 bits (73), Expect = 8e-04
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 36 CADESSVDLNLVEKVNAGTDLATITDGKLKCYIKCTMETAGMMS 79
CA+E+ +DL + V G + D KL CY+ C ++ G ++
Sbjct: 33 CAEENGIDLKKADDVKKG--IFDKNDEKLACYVDCMLKKVGFVN 74
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 24.6 bits (51), Expect = 0.38
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 61 DGKLKCYIKCTMETAGMMSDGVV----DVEAVLSLLPDSLKTKNEASLKKCDTQ-KGSDD 115
D +L CY+KC M M + V+ V+ +L + + E+ ++ C + ++
Sbjct: 65 DERLMCYMKCIMIATKAMKNDVILWDFFVKNARMILLEEYIPRVESVVETCKKEVTSTEG 124
Query: 116 CDTAYLTQICWQAANKADY 134
C+ A+ C +K Y
Sbjct: 125 CEVAWQFGKCIYENDKELY 143
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 24.6 bits (51), Expect = 0.38
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 61 DGKLKCYIKCTMETAGMMSDGVV----DVEAVLSLLPDSLKTKNEASLKKCDTQ-KGSDD 115
D +L CY+KC M M + V+ V+ +L + + E+ ++ C + ++
Sbjct: 39 DERLMCYMKCIMIATKAMKNDVILWDFFVKNARMILLEEYIPRVESVVETCKKEVTSTEG 98
Query: 116 CDTAYLTQICWQAANKADY 134
C+ A+ C +K Y
Sbjct: 99 CEVAWQFGKCIYENDKELY 117
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 21.0 bits (42), Expect = 4.7
Identities = 12/47 (25%), Positives = 19/47 (40%)
Query: 68 IKCTMETAGMMSDGVVDVEAVLSLLPDSLKTKNEASLKKCDTQKGSD 114
I CT S V+ + +S S +T +++KCD D
Sbjct: 215 INCTYVALYPSSVQVIALGVGVSNFLSSTRTAETGTIRKCDESSPHD 261
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.130 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,763
Number of Sequences: 429
Number of extensions: 992
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 137
length of database: 140,377
effective HSP length: 52
effective length of query: 85
effective length of database: 118,069
effective search space: 10035865
effective search space used: 10035865
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)
S2: 40 (20.2 bits)
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