Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002307-TA|BGIBMGA002307-PA|IPR001128|Cytochrome P450
(458 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 71 3e-13
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 60 6e-10
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 30 0.59
SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual 30 0.78
SPCC70.06 |||nuclear export factor|Schizosaccharomyces pombe|chr... 27 5.5
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 7.2
SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pomb... 27 7.2
SPBC776.05 |||membrane transporter |Schizosaccharomyces pombe|ch... 27 7.2
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 71.3 bits (167), Expect = 3e-13
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 264 TIIVAGYDTSSWVLTLVMMALGSYPEIQNKVYQE-VSSMFGDSEADVDKSHYPGLVYVEA 322
+ + A D +S +T + L +P++ KV +E + GD + + + Y A
Sbjct: 315 SFLFASQDATSSAMTWLFQLLADHPDVLQKVREEQLRIRKGDIDVPLSLDLMEKMTYTRA 374
Query: 323 VLKETLRLYP-IVPIALRQTESDIELKNYTIPADSNCVLGIYGLNRHPVWGPDAHTFRPE 381
V+KE LRL P ++ + R ++ +YT+P D+ + +YG P+ TF P+
Sbjct: 375 VVKECLRLRPPVLMVPYRVKKAFPITPDYTVPKDAMVIPTLYGALHDSKVYPEPETFNPD 434
Query: 382 RWLEPGGVPDDPNAFAGFSVGKRTCIGKVYAL 413
RW G P + F G C+G+ YA+
Sbjct: 435 RWAPNGLAEQSPKNWMVFGNGPHVCLGQRYAV 466
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 60.1 bits (139), Expect = 6e-10
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 257 EIRDEVDTIIVAGYDTSSWVLTLVMMALGSYPEIQNKVYQEVSSMFGDSEADVDKSHYPG 316
EI + +++AG TS+ + V+ LGS PEI +++E + G++ ++ Y
Sbjct: 277 EIAGMMIALLMAGQHTSAATIVWVLALLGSKPEIIEMLWEEQKRVVGEN-LELKFDQYKD 335
Query: 317 LVYVEAVLKETLRLYPIVPIALRQTESDIEL--KNYTIPADSNCVLGIYGLN-RHPVWGP 373
+ + V++ETLRL+P + +R+ + D+ + IPA +N +L GL +
Sbjct: 336 MPLLNYVIQETLRLHPPIHSHMRKVKRDLPVPGSKIVIPA-NNYLLAAPGLTATEEEYFT 394
Query: 374 DAHTFRPERWLEPGGVPDDPNA-----------------FAGFSVGKRTCIGKVYALMSM 416
A F P+RW + V +D NA + F G+ CIG+ +A M +
Sbjct: 395 HATDFDPKRWND--RVNEDENAEQIDYGYGLVTKGAASPYLPFGAGRHRCIGEQFAYMHL 452
Query: 417 KTTLVHLIRRYKVTADISKV 436
T + + Y T I KV
Sbjct: 453 STIISKFVHDYTWTL-IGKV 471
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 30.3 bits (65), Expect = 0.59
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 19/138 (13%)
Query: 108 IGVFNDESRKLVSEIGNEMAKGP-VEVTTPFRQMAFRLLFLTAFGIPVEDSDFNQKYIHS 166
+ +F + L+ I +++ G VE P R + LL P+ D N +
Sbjct: 356 MNIFEKQQLNLIGAIEQDLSTGSNVEGKVP-RSVLSELL-------PLLDEG-NAEESTK 406
Query: 167 VDKLLSMLIYRFQNVLLHNSF-IYKISGLKKKEEQIVETVHAMSNMIIKR------KREA 219
+ LL +IYR ++L + F +++ S L EQI + + + +IK KR+
Sbjct: 407 IRLLLLYIIYR-DGIILQDLFRLFRHSNLSTSREQIFQNLEQLGTRVIKNLTDQSSKRKE 465
Query: 220 SKNKSPTDEHCYDTTHRY 237
N P E Y+ + RY
Sbjct: 466 VANSLPAGEDVYELS-RY 482
>SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 304
Score = 29.9 bits (64), Expect = 0.78
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 2 NPINTMRMDKI-VITLIGVLRTVKSICEDTNDKGGVTVARLALQDYYVITD 51
N I + DKI +I I K++C++ + G+ A+L + +Y ITD
Sbjct: 189 NTITELDEDKIYIIGAIVDKNRYKNLCQNKASEQGIKTAKLPIDEYIKITD 239
>SPCC70.06 |||nuclear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 458
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 289 EIQNKVYQEVSSMFGDSEADVDKSHYPGLVYVEAVLKETLRLYPI 333
E + + Y + S+ GD +D +P V+ + ++K +L+LY +
Sbjct: 239 EAEFRAYMVLLSL-GDPSVGLDTLSWPDFVFKKPIVKTSLKLYSL 282
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 84 SGETWKRHRKLLNPAFNQQILNSFIGVFNDE-SRKLVSEIGNEMAK 128
+ +TW +LN A N ++ F+G ND S KL GN K
Sbjct: 1565 ANDTWMY---ILNNARNGDLITRFVGALNDPMSEKLRETAGNYWGK 1607
>SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1136
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 166 SVDKLLSMLIYRFQNVLLHNSFIYKISGLKKKEEQIVETVHAMSNMI 212
S + ++SM+ NVL+ S YK+ L Q VET+ ++
Sbjct: 233 SPNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTIL 279
>SPBC776.05 |||membrane transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 160 NQKYIHSVDKLLSMLIYRFQNVLLH 184
N HS+DK+ S+ I+ F ++LH
Sbjct: 209 NSLLFHSIDKITSLFIHFFPPLVLH 233
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.137 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,081,852
Number of Sequences: 5004
Number of extensions: 87305
Number of successful extensions: 246
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 238
Number of HSP's gapped (non-prelim): 9
length of query: 458
length of database: 2,362,478
effective HSP length: 75
effective length of query: 383
effective length of database: 1,987,178
effective search space: 761089174
effective search space used: 761089174
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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