GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002306-TA|BGIBMGA002306-PA|undefined
         (144 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   0.61 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   0.81 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   1.9  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   1.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   5.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   10.0 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   10.0 
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    20   10.0 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          20   10.0 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   10.0 

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 0.61
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 102 LSVRLYNKIPQDVQNLHIDRFKKTIK 127
           LS+ L + +P++V N  I R  +T+K
Sbjct: 348 LSLDLLSYVPREVYNKEISRLVETLK 373


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 0.81
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 51  AQYIFENLMYVRKHIEELPKKSDIHNRNTRNKHKLVLPMSRLHKIRNS 98
           + ++ +N  Y ++HI     +S    R TR K K  LP+ +L ++  +
Sbjct: 564 SNHMVKNSHY-KEHIMRSITESGGRRRQTREKRKKSLPVRKLLELERA 610


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 56  ENLMYVRKHIEELPKKSDIHNRNTRNKHKLVLPMSRLHKIRNSFGCL 102
           EN+  + K + EL +K  +  RN       VL +  +H + ++ G L
Sbjct: 103 ENMTKIDKDLTELGQKKYLEKRNRHIFRTSVLLIFVMHLMFDTLGGL 149


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 56  ENLMYVRKHIEELPKKSDIHNRNTRNKHKLVLPMSRLHKIRNSFGCL 102
           EN+  + K + EL +K  +  RN       VL +  +H + ++ G L
Sbjct: 103 ENMTKIDKDLTELGQKKYLEKRNRHIFRTSVLLIFVMHLMFDTLGGL 149


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 99  FGCLSVRLY 107
           FGCLS RL+
Sbjct: 271 FGCLSTRLF 279


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 124 KTIKEHLYN 132
           KTIK+H+Y+
Sbjct: 24  KTIKQHIYS 32


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 7/16 (43%), Positives = 13/16 (81%)

Query: 82  KHKLVLPMSRLHKIRN 97
           ++KL+  +S+LHK+ N
Sbjct: 101 QNKLIEVISKLHKLDN 116


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 131 YNKAYYKVNDYLE 143
           YN+AY   N+Y E
Sbjct: 217 YNQAYSNYNNYQE 229


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 131 YNKAYYKVNDYLE 143
           YN+AY   N+Y E
Sbjct: 237 YNQAYSNYNNYQE 249


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 124 KTIKEHLYN 132
           KTIK+H+Y+
Sbjct: 24  KTIKQHIYS 32


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.138    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,872
Number of Sequences: 317
Number of extensions: 1419
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 144
length of database: 114,650
effective HSP length: 51
effective length of query: 93
effective length of database: 98,483
effective search space:  9158919
effective search space used:  9158919
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)