GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002306-TA|BGIBMGA002306-PA|undefined
         (144 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...    24   2.3  
Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase pr...    23   5.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   6.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   6.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   6.9  

>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 10/40 (25%), Positives = 24/40 (60%)

Query: 56  ENLMYVRKHIEELPKKSDIHNRNTRNKHKLVLPMSRLHKI 95
           E+L ++ K    + K  + + ++  +K +L+L  SR+H++
Sbjct: 86  EDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIESRIHRL 125


>Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase
           protein.
          Length = 237

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 5   ILVWGNAADVEMIFILQKRAIRAIYNMHSRE 35
           ++ WG A++  +   LQK  +  I NM  R+
Sbjct: 120 VIGWGKASEWSLSQGLQKAIVPIISNMQCRK 150


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 59  MYVRKHIEELPKKSDIHNRNT 79
           MY R H+  L  K ++H ++T
Sbjct: 938 MYARLHLLHLNWKHEVHRQST 958


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 59  MYVRKHIEELPKKSDIHNRNT 79
           MY R H+  L  K ++H ++T
Sbjct: 939 MYARLHLLHLNWKHEVHRQST 959


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 86  VLPMSRLHKIRNSFGCLSVRLYNKIPQDV-QNLHIDRFKKTIKEHLYNKAY 135
           +  ++ L  IR   G + + LY+ +PQ +   L I R + T K + + +AY
Sbjct: 43  ITDLNFLQHIREVTGYVLISLYD-LPQVILPRLQIIRGRTTFKLNKWEEAY 92


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.138    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,308
Number of Sequences: 2123
Number of extensions: 5493
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 5
length of query: 144
length of database: 516,269
effective HSP length: 58
effective length of query: 86
effective length of database: 393,135
effective search space: 33809610
effective search space used: 33809610
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)