Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002306-TA|BGIBMGA002306-PA|undefined
(144 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 24 0.73
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 24 0.73
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 24 0.73
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 24 0.73
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 24 0.73
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 24 0.73
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 24 0.73
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 24 0.73
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 24 0.73
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 0.73
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 0.73
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 2.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 2.9
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 3.9
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 3.9
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 21 5.1
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 21 5.1
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 21 5.1
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 6.8
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 6.8
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 6.8
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 6.8
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 6.8
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 6.8
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 6.8
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.73
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Query: 128 EHLYNKAYYKVNDYLE 143
+H YNK YY +N Y+E
Sbjct: 103 KHNYNKLYYNIN-YIE 117
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.73
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Query: 128 EHLYNKAYYKVNDYLE 143
+H YNK YY +N Y+E
Sbjct: 103 KHNYNKLYYNIN-YIE 117
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.73
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Query: 128 EHLYNKAYYKVNDYLE 143
+H YNK YY +N Y+E
Sbjct: 103 KHNYNKLYYNIN-YIE 117
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.73
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Query: 128 EHLYNKAYYKVNDYLE 143
+H YNK YY +N Y+E
Sbjct: 103 KHNYNKLYYNIN-YIE 117
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.73
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Query: 128 EHLYNKAYYKVNDYLE 143
+H YNK YY +N Y+E
Sbjct: 103 KHNYNKLYYNIN-YIE 117
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.73
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Query: 128 EHLYNKAYYKVNDYLE 143
+H YNK YY +N Y+E
Sbjct: 103 KHNYNKLYYNIN-YIE 117
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.73
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Query: 128 EHLYNKAYYKVNDYLE 143
+H YNK YY +N Y+E
Sbjct: 103 KHNYNKLYYNIN-YIE 117
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.73
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Query: 128 EHLYNKAYYKVNDYLE 143
+H YNK YY +N Y+E
Sbjct: 103 KHNYNKLYYNIN-YIE 117
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.73
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Query: 128 EHLYNKAYYKVNDYLE 143
+H YNK YY +N Y+E
Sbjct: 103 KHNYNKLYYNIN-YIE 117
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 0.73
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Query: 128 EHLYNKAYYKVNDYLE 143
+H YNK YY +N Y+E
Sbjct: 336 KHNYNKLYYNIN-YIE 350
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 0.73
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Query: 128 EHLYNKAYYKVNDYLE 143
+H YNK YY +N Y+E
Sbjct: 336 KHNYNKLYYNIN-YIE 350
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 2.9
Identities = 8/39 (20%), Positives = 17/39 (43%)
Query: 20 LQKRAIRAIYNMHSREFLREKLKEIKVLTMPAQYIFENL 58
++ A +YN+H+ E KL+ + ++ L
Sbjct: 374 IESNAFLPLYNLHTLELSDNKLRTVGAQLFNGLFVLNRL 412
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 2.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 132 NKAYYKVNDYLED 144
NK YK NDY+ D
Sbjct: 939 NKKVYKQNDYIVD 951
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 3.9
Identities = 18/95 (18%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 63 KHIEELPKKSDIHNRNTRNKHKLVLPMSRLHKIRNSFGCL--SVRLYNKIPQDVQN---- 116
++I+E +D+ + NK + ++ L+ ++N+ S+ + I Q++ +
Sbjct: 369 RNIDEY-NNNDLDTKKWNNKISALRALNDLYNVKNTLDSYNGSMEINQNIAQNIDHAKNT 427
Query: 117 --------LHIDRFKKTIKEHLYNKAYYKVNDYLE 143
L I+ K+TI+ N+ Y +Y++
Sbjct: 428 IIDYRNNDLSINEEKRTIENEQLNRMYKSYPNYID 462
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 39 EKLKEIKVLTMPAQYIFENLMYVRKHIEELPKKSDIHNRNTRN 81
+KL +I+ L + +YI + ++E D RN R+
Sbjct: 286 DKLSKIQTLKLATRYIDFLFQVLHCNMENTEGADDASERNPRS 328
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.0 bits (42), Expect = 5.1
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 22 KRAIRAIYNMHSREFLREKLKEIKVLTMPAQYIFENLMYVRKHIEELPKK 71
KRA M ++ L E L EIK T Q +Y+ + E+ K+
Sbjct: 108 KRAPMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSKDVYLIDYPEDYGKR 157
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 21.0 bits (42), Expect = 5.1
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 22 KRAIRAIYNMHSREFLREKLKEIKVLTMPAQYIFENLMYVRKHIEELPKK 71
KRA M ++ L E L EIK T Q +Y+ + E+ K+
Sbjct: 108 KRAPMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSKDVYLIDYPEDYGKR 157
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.0 bits (42), Expect = 5.1
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 22 KRAIRAIYNMHSREFLREKLKEIKVLTMPAQYIFENLMYVRKHIEELPKK 71
KRA M ++ L E L EIK T Q +Y+ + E+ K+
Sbjct: 108 KRAPMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSKDVYLIDYPEDYGKR 157
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 20.6 bits (41), Expect = 6.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 99 FGCLSVRLY 107
FGCLS RL+
Sbjct: 275 FGCLSTRLF 283
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.6 bits (41), Expect = 6.8
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 109 KIPQDVQNLHIDRFKKTIKEHLYNKAYYKVNDYLE 143
KI + N +I ++ YNK Y +Y+E
Sbjct: 80 KIISSLSNNYISNISNYNNDNNYNKKLYYNINYIE 114
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 117 LHIDRFKKTIKEHLYNKAYYKVNDYLE 143
+H + +K + YNK Y +Y+E
Sbjct: 90 IHNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 117 LHIDRFKKTIKEHLYNKAYYKVNDYLE 143
+H + +K + YNK Y +Y+E
Sbjct: 90 IHNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 117 LHIDRFKKTIKEHLYNKAYYKVNDYLE 143
+H + +K + YNK Y +Y+E
Sbjct: 90 IHNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 117 LHIDRFKKTIKEHLYNKAYYKVNDYLE 143
+H + +K + YNK Y +Y+E
Sbjct: 90 IHNNNYKYNYNNNNYNKKLYYNINYIE 116
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 20.6 bits (41), Expect = 6.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 72 SDIHNRNTRNKHKLV 86
+DIH+RN N K++
Sbjct: 18 TDIHSRNLTNSLKVI 32
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.324 0.138 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,141
Number of Sequences: 429
Number of extensions: 2134
Number of successful extensions: 25
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of query: 144
length of database: 140,377
effective HSP length: 52
effective length of query: 92
effective length of database: 118,069
effective search space: 10862348
effective search space used: 10862348
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 40 (20.2 bits)
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