Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002305-TA|BGIBMGA002305-PA|IPR012337|Polynucleotidyl
transferase, Ribonuclease H fold, IPR001584|Integrase, catalytic
region
(181 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p pro... 36 0.043
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 34 0.13
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 33 0.17
AB023510-1|BAA82136.1| 485|Drosophila melanogaster 6-phosphofru... 32 0.40
BT023066-1|AAY55482.1| 331|Drosophila melanogaster IP08618p pro... 32 0.53
BT022962-1|AAY55378.1| 331|Drosophila melanogaster IP08418p pro... 32 0.53
AE014296-1029|AAN12231.1| 236|Drosophila melanogaster CG32413-P... 32 0.53
BT022775-1|AAY55191.1| 636|Drosophila melanogaster IP13956p pro... 30 1.6
BT022767-1|AAY55183.1| 636|Drosophila melanogaster IP13856p pro... 30 1.6
AE014296-3276|AAF49071.1| 636|Drosophila melanogaster CG7385-PA... 30 1.6
AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p pro... 30 2.1
AY051538-1|AAK92962.1| 409|Drosophila melanogaster GH19029p pro... 30 2.1
AE014296-2287|AAF49810.2| 447|Drosophila melanogaster CG10089-P... 30 2.1
AE014134-2289|AAF53252.2| 409|Drosophila melanogaster CG5287-PA... 30 2.1
BT003791-1|AAO41474.1| 1339|Drosophila melanogaster GH09006p pro... 29 4.9
BT003635-1|AAO39639.1| 1339|Drosophila melanogaster AT19678p pro... 29 4.9
AE014296-3167|AAF49148.2| 1339|Drosophila melanogaster CG9279-PB... 29 4.9
AE014296-3166|AAF49149.1| 1339|Drosophila melanogaster CG9279-PA... 29 4.9
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 28 6.5
BT001617-1|AAN71372.1| 1044|Drosophila melanogaster RE34950p pro... 28 6.5
AY058651-1|AAL13880.1| 606|Drosophila melanogaster LD35285p pro... 28 6.5
AE014296-1012|AAF50744.2| 1044|Drosophila melanogaster CG10542-P... 28 6.5
BT022298-1|AAY54714.1| 209|Drosophila melanogaster IP04662p pro... 28 8.6
AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro... 28 8.6
AY071094-1|AAL48716.1| 583|Drosophila melanogaster RE15838p pro... 28 8.6
AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-P... 28 8.6
AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P... 28 8.6
AE014297-1150|AAF54531.1| 583|Drosophila melanogaster CG6345-PA... 28 8.6
>AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p
protein.
Length = 451
Score = 35.5 bits (78), Expect = 0.043
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 49 VVENRTVTPFFANFGRELRLPADLVIGTPPDVSRSVTEYANDLRSKINEVHEDVRQSSQQ 108
V E +P F GRE RLP + + + T+ + K+ E+ E VR++ ++
Sbjct: 299 VAETTGYSPAFITQGREPRLP-NALFDEKTTGTGKCTQTPVENAEKLKEIFELVRRNMEK 357
Query: 109 ASSRMKSHYDREANQKGFSEGSLVWL--HNPCFRSIVKSPKLQAKWDGPYRI 158
A HY+ VW H+ + + KL ++DGPY I
Sbjct: 358 AVQDQARHYNLRRRPWKPKVRDTVWAKEHHLSKAAEGFAAKLAPRFDGPYMI 409
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 33.9 bits (74), Expect = 0.13
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 34/183 (18%)
Query: 4 TDLSDEWKGAL-----QVLGIHKTRTTSYHPQSDGMVESCNQTLERYLAKVVE------- 51
TD+ E+K ++ + L I +T++H Q+ G+VE ++TL Y+ +
Sbjct: 1030 TDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYISTDKTDWD 1089
Query: 52 ----------NRTVT------PFFANFGRELRLPADLVIGTPPDVSRSVTEYANDLRSKI 95
N T + P+ FGR LP + ++ +YA + + ++
Sbjct: 1090 VWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYNIDDYAKESKYRL 1149
Query: 96 NEVHEDVRQSSQQASSRMKSHYDREANQKGFSEGSLVWLHNPCFRSIVKSPKLQAKWDGP 155
+ R+ + + K +YD + G V L N KL K+ GP
Sbjct: 1150 EVAYARARKLLEAHKEKNKENYDLKVKDIELEVGDKVLLRNEV------GHKLDFKYTGP 1203
Query: 156 YRI 158
Y+I
Sbjct: 1204 YKI 1206
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 33.5 bits (73), Expect = 0.17
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 34/183 (18%)
Query: 4 TDLSDEWKGAL-----QVLGIHKTRTTSYHPQSDGMVESCNQTLERYLAKVVE------- 51
TD+ E+K ++ + L I +T++H Q+ G+VE ++TL Y+ +
Sbjct: 793 TDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYISTDKTDWD 852
Query: 52 ----------NRTVT------PFFANFGRELRLPADLVIGTPPDVSRSVTEYANDLRSKI 95
N T + P+ FGR LP + ++ +YA + + ++
Sbjct: 853 VWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYNIDDYAKESKYRL 912
Query: 96 NEVHEDVRQSSQQASSRMKSHYDREANQKGFSEGSLVWLHNPCFRSIVKSPKLQAKWDGP 155
+ R+ + + K +YD + G V L N KL K+ GP
Sbjct: 913 EVAYARARKLLEAHKEKNKENYDLKIKDIELEVGDKVLLRNEV------GHKLDFKYTGP 966
Query: 156 YRI 158
Y+I
Sbjct: 967 YKI 969
>AB023510-1|BAA82136.1| 485|Drosophila melanogaster 6-phosphofructo
2-kinase/fructose2,6-bisphosphatase short form protein.
Length = 485
Score = 32.3 bits (70), Expect = 0.40
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 67 RLPADLVIGTPPDVSRSVTEYANDLRSKINEVHEDVRQSSQQASSRMKSHYDREANQKGF 126
R P L PP +R + Y +DL + N + SS ASS S A G
Sbjct: 100 RTPTLLPRPVPPSSTRFTSSYNDDLCTCSNCAYSSFSSSSSSASSTSSS--STSATAAGT 157
Query: 127 SEGSLVWLHNPCFRSIVKSPKLQ--AKWDGPYRIMTKINDSRIEFRKVYQACLKLYV 181
+ S + + +V LQ ++ Y+ + ++ +S + F KVY A K+ V
Sbjct: 158 ALASAA--ASAVAKKLVVRDFLQRIEHYEERYQPIDEVTESHLSFMKVYNAGKKVVV 212
>BT023066-1|AAY55482.1| 331|Drosophila melanogaster IP08618p
protein.
Length = 331
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 74 IGTPPDVSRSVTEYANDLRSKINEVHEDVRQSSQ----QASSRMKSHYDRE 120
IG P S E NDL + I ++ +D+R+S + + K+HYD++
Sbjct: 202 IGAPNQTFLSFFEVTNDLHNLIADIEQDLRKSGELDDCHVLFQKKTHYDKD 252
>BT022962-1|AAY55378.1| 331|Drosophila melanogaster IP08418p
protein.
Length = 331
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 74 IGTPPDVSRSVTEYANDLRSKINEVHEDVRQSSQ----QASSRMKSHYDRE 120
IG P S E NDL + I ++ +D+R+S + + K+HYD++
Sbjct: 202 IGAPNQTFLSFFEVTNDLHNLIADIEQDLRKSGELDDCHVLFQKKTHYDKD 252
>AE014296-1029|AAN12231.1| 236|Drosophila melanogaster CG32413-PA
protein.
Length = 236
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 74 IGTPPDVSRSVTEYANDLRSKINEVHEDVRQSSQ----QASSRMKSHYDRE 120
IG P S E NDL + I ++ +D+R+S + + K+HYD++
Sbjct: 146 IGAPNQTFLSFFEVTNDLHNLIADIEQDLRKSGELDDCHVLFQKKTHYDKD 196
>BT022775-1|AAY55191.1| 636|Drosophila melanogaster IP13956p
protein.
Length = 636
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 61 NFGRELRLPADLVIGTPPDVSRSVTEYAN 89
NF E+ +P D +IG+P D RS+ E N
Sbjct: 124 NFTYEVVVPQDNIIGSPSDFDRSLIEMVN 152
>BT022767-1|AAY55183.1| 636|Drosophila melanogaster IP13856p
protein.
Length = 636
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 61 NFGRELRLPADLVIGTPPDVSRSVTEYAN 89
NF E+ +P D +IG+P D RS+ E N
Sbjct: 124 NFTYEVVVPQDNIIGSPSDFDRSLIEMVN 152
>AE014296-3276|AAF49071.1| 636|Drosophila melanogaster CG7385-PA
protein.
Length = 636
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 61 NFGRELRLPADLVIGTPPDVSRSVTEYAN 89
NF E+ +P D +IG+P D RS+ E N
Sbjct: 124 NFTYEVVVPQDNIIGSPSDFDRSLIEMVN 152
>AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p
protein.
Length = 320
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 4 TDLSDEWKGAL-----QVLGIHKTRTTSYHPQSDGMVESCNQTLERYLAKVV 50
TD+ E+K ++ + L I +T++H Q+ G+VE ++TL Y+ +
Sbjct: 181 TDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYI 232
>AY051538-1|AAK92962.1| 409|Drosophila melanogaster GH19029p
protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 12 GALQVLGIHKTRTTSYHPQSDGMVESCNQTLERYLAKV---VENRTVTPFFANF 62
G L V + R S+H ++DG+V + N TL ++ V V R VT F
Sbjct: 333 GRLMVTVLRNLRLISWHTKADGVVRTNNFTLINFVLVVFGPVHERVVTQMLMGF 386
>AE014296-2287|AAF49810.2| 447|Drosophila melanogaster CG10089-PD,
isoform D protein.
Length = 447
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 67 RLPAD-LVIGTPPDVSRSVTEYANDLRSKINEVHEDVRQSSQQASSRMKS 115
R+P D +V+ PP SR EYA E + Q QQ S +S
Sbjct: 265 RIPEDEIVLEQPPTTSREAAEYAAAFEDARREQEQRQLQQQQQLSRSQRS 314
>AE014134-2289|AAF53252.2| 409|Drosophila melanogaster CG5287-PA
protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 12 GALQVLGIHKTRTTSYHPQSDGMVESCNQTLERYLAKV---VENRTVTPFFANF 62
G L V + R S+H ++DG+V + N TL ++ V V R VT F
Sbjct: 333 GRLMVTVLRNLRLISWHTKADGVVRTNNFTLINFVLVVFGPVHERVVTQMLMGF 386
>BT003791-1|AAO41474.1| 1339|Drosophila melanogaster GH09006p
protein.
Length = 1339
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 86 EYANDLRSKINEVHEDVRQSSQQASSRMKSHYDREANQKGFSE 128
E DLR +I+++ V+ QQ ++ M+S YDR+ F +
Sbjct: 641 ELETDLREEIDKLSGHVKILEQQKNAAMESLYDRDVTIMKFRD 683
>BT003635-1|AAO39639.1| 1339|Drosophila melanogaster AT19678p
protein.
Length = 1339
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 86 EYANDLRSKINEVHEDVRQSSQQASSRMKSHYDREANQKGFSE 128
E DLR +I+++ V+ QQ ++ M+S YDR+ F +
Sbjct: 641 ELETDLREEIDKLSGHVKILEQQKNAAMESLYDRDVTIMKFRD 683
>AE014296-3167|AAF49148.2| 1339|Drosophila melanogaster CG9279-PB,
isoform B protein.
Length = 1339
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 86 EYANDLRSKINEVHEDVRQSSQQASSRMKSHYDREANQKGFSE 128
E DLR +I+++ V+ QQ ++ M+S YDR+ F +
Sbjct: 641 ELETDLREEIDKLSGHVKILEQQKNAAMESLYDRDVTIMKFRD 683
>AE014296-3166|AAF49149.1| 1339|Drosophila melanogaster CG9279-PA,
isoform A protein.
Length = 1339
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 86 EYANDLRSKINEVHEDVRQSSQQASSRMKSHYDREANQKGFSE 128
E DLR +I+++ V+ QQ ++ M+S YDR+ F +
Sbjct: 641 ELETDLREEIDKLSGHVKILEQQKNAAMESLYDRDVTIMKFRD 683
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 67 RLPADLVIGTPPDVSRSVTEYANDLRSK 94
R P D++ TPP+++ + E N+ + K
Sbjct: 952 RRPIDIIHSTPPELANEIVEMVNEAQEK 979
>BT001617-1|AAN71372.1| 1044|Drosophila melanogaster RE34950p
protein.
Length = 1044
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 48 KVVENRTVTPFFA------NFGRELRLPADLVIGTPPDVSRSVTEYAND--LRSKINEVH 99
K VE+ TV A N +E++L D+ G D V A + LRS+I E+
Sbjct: 664 KAVESETVRDLKAQLKKALNDQKEMKLLLDMYKGVSKDQRDKVQLMATEKKLRSEIEELR 723
Query: 100 EDVRQSSQQASSRMKSHYDREANQK 124
+ +++ + K D EA +K
Sbjct: 724 QQLKKLQESKREERKKLADEEALRK 748
>AY058651-1|AAL13880.1| 606|Drosophila melanogaster LD35285p
protein.
Length = 606
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 48 KVVENRTVTPFFA------NFGRELRLPADLVIGTPPDVSRSVTEYAND--LRSKINEVH 99
K VE+ TV A N +E++L D+ G D V A + LRS+I E+
Sbjct: 226 KAVESETVRDLKAQLKKALNDQKEMKLLLDMYKGVSKDQRDKVQLMATEKKLRSEIEELR 285
Query: 100 EDVRQSSQQASSRMKSHYDREANQK 124
+ +++ + K D EA +K
Sbjct: 286 QQLKKLQESKREERKKLADEEALRK 310
>AE014296-1012|AAF50744.2| 1044|Drosophila melanogaster CG10542-PA
protein.
Length = 1044
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 48 KVVENRTVTPFFA------NFGRELRLPADLVIGTPPDVSRSVTEYAND--LRSKINEVH 99
K VE+ TV A N +E++L D+ G D V A + LRS+I E+
Sbjct: 664 KAVESETVRDLKAQLKKALNDQKEMKLLLDMYKGVSKDQRDKVQLMATEKKLRSEIEELR 723
Query: 100 EDVRQSSQQASSRMKSHYDREANQK 124
+ +++ + K D EA +K
Sbjct: 724 QQLKKLQESKREERKKLADEEALRK 748
>BT022298-1|AAY54714.1| 209|Drosophila melanogaster IP04662p
protein.
Length = 209
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 77 PPDVSRSVTEYANDLRSKINEVHEDVRQSSQQASSRMKSHYDREANQ 123
PP SRS T +N RS + + SS +SSR S++ E Q
Sbjct: 80 PPSCSRS-TSSSNSSRSTTSSSSSNTTNSSSSSSSRHHSNHTNERIQ 125
>AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p
protein.
Length = 1688
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 89 NDLRSKINEVHEDVRQSSQQASSRMKSHYDREANQ 123
+D SK+ +V E+ ++S + +R K HY NQ
Sbjct: 419 DDFMSKLEQVQEEEQKSKSRKLNRKKRHYADVDNQ 453
>AY071094-1|AAL48716.1| 583|Drosophila melanogaster RE15838p
protein.
Length = 583
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 77 PPDVSRSVTEYANDLRSKINEVHEDVRQSSQQASSRMKSHYDREA 121
P D S V E D + ++H + + Q RM+ Y REA
Sbjct: 356 PKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREA 400
>AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-PA,
isoform A protein.
Length = 1537
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 89 NDLRSKINEVHEDVRQSSQQASSRMKSHYDREANQ 123
+D SK+ +V E+ ++S + +R K HY NQ
Sbjct: 268 DDFMSKLEQVQEEEQKSKSRKLNRKKRHYADVDNQ 302
>AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB,
isoform B protein.
Length = 1688
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 89 NDLRSKINEVHEDVRQSSQQASSRMKSHYDREANQ 123
+D SK+ +V E+ ++S + +R K HY NQ
Sbjct: 419 DDFMSKLEQVQEEEQKSKSRKLNRKKRHYADVDNQ 453
>AE014297-1150|AAF54531.1| 583|Drosophila melanogaster CG6345-PA
protein.
Length = 583
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 77 PPDVSRSVTEYANDLRSKINEVHEDVRQSSQQASSRMKSHYDREA 121
P D S V E D + ++H + + Q RM+ Y REA
Sbjct: 356 PKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREA 400
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.318 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,581,571
Number of Sequences: 52641
Number of extensions: 322773
Number of successful extensions: 1010
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 989
Number of HSP's gapped (non-prelim): 33
length of query: 181
length of database: 24,830,863
effective HSP length: 80
effective length of query: 101
effective length of database: 20,619,583
effective search space: 2082577883
effective search space used: 2082577883
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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