Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002303-TA|BGIBMGA002303-PA|undefined
(136 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q23YG6 Cluster: Cation channel family protein; n=2; cel... 37 0.17
UniRef50_A0CGE6 Cluster: Chromosome undetermined scaffold_18, wh... 33 2.7
UniRef50_Q503D1 Cluster: Zgc:110694; n=5; Clupeocephala|Rep: Zgc... 32 4.7
UniRef50_Q2BQ15 Cluster: Diguanylate cyclase/phosphodiesterase d... 32 4.7
UniRef50_A6VTQ7 Cluster: 6-aminohexanoate-dimer hydrolase precur... 31 6.2
UniRef50_Q54RH1 Cluster: Putative uncharacterized protein; n=4; ... 31 6.2
UniRef50_Q1E2W9 Cluster: Putative uncharacterized protein; n=1; ... 31 6.2
UniRef50_O06916 Cluster: Spectinomycin phosphotransferase; n=6; ... 31 8.2
>UniRef50_Q23YG6 Cluster: Cation channel family protein; n=2;
cellular organisms|Rep: Cation channel family protein -
Tetrahymena thermophila SB210
Length = 2014
Score = 36.7 bits (81), Expect = 0.17
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 13 KIETRLDDS-YGIEIKVCKFVDGGCKPFTVLKDESFTKFVEYHIGKNVEKILSAAGVEPA 71
+IE DDS EI+ KFV+ PFT + E KF I KNV K+ S V+
Sbjct: 777 QIENLADDSKVNHEIEEQKFVNQNYDPFTKERSEGIFKFQSRKIQKNVIKLPSITQVQQM 836
Query: 72 RFP 74
FP
Sbjct: 837 IFP 839
>UniRef50_A0CGE6 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1271
Score = 32.7 bits (71), Expect = 2.7
Identities = 17/71 (23%), Positives = 31/71 (43%)
Query: 9 NGVLKIETRLDDSYGIEIKVCKFVDGGCKPFTVLKDESFTKFVEYHIGKNVEKILSAAGV 68
+G++ I+ + DD+ IE C D C + +E + N +K ++ G
Sbjct: 685 DGIITIDEQCDDANSIEYDGCHQCDYSCPQNCNVCEEGICSKCNFGFYLNDQKCITKCGD 744
Query: 69 EPARFPIEPCE 79
FP+E C+
Sbjct: 745 GLIGFPVEECD 755
>UniRef50_Q503D1 Cluster: Zgc:110694; n=5; Clupeocephala|Rep:
Zgc:110694 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 532
Score = 31.9 bits (69), Expect = 4.7
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 18 LDDSYGIEIKVCKFVDGGCKPFTVLKDESFTKFVEYHIGKNVEKIL 63
L DS+ + +K+ K +DGG FT+ K+ T E KN+E++L
Sbjct: 469 LKDSFQMSLKMLKALDGG-NTFTLPKNTKLTSLQESLQSKNLEEML 513
>UniRef50_Q2BQ15 Cluster: Diguanylate cyclase/phosphodiesterase
domain 2; n=1; Neptuniibacter caesariensis|Rep:
Diguanylate cyclase/phosphodiesterase domain 2 -
Neptuniibacter caesariensis
Length = 594
Score = 31.9 bits (69), Expect = 4.7
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 26 IKVCKFVDGGCKPFTVLKDESFTKFVEYHIGKNVEKILSAAGVEPARFPIEPCEK 80
++ +++ C PF + + S+ +F + HI VEK+L +G+ +E E+
Sbjct: 410 LQAAEWMATACVPFKIAVNVSYPQFRDGHIVSTVEKVLKKSGLPAQCLELELTER 464
>UniRef50_A6VTQ7 Cluster: 6-aminohexanoate-dimer hydrolase
precursor; n=1; Marinomonas sp. MWYL1|Rep:
6-aminohexanoate-dimer hydrolase precursor - Marinomonas
sp. MWYL1
Length = 425
Score = 31.5 bits (68), Expect = 6.2
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 54 HIGK--NVEKILSAAGVEPARFPIEPCEKKITGYLFSYEELPHAGLYGSFHCHTTVLQRN 111
H GK N ++I+S V+ + P++ + K+ GY + + +P+ Y + + N
Sbjct: 327 HNGKAANGKQIVSPEWVKLSTAPVDKEDPKLGGYGYQWWTMPNTNAYSAIGLQGQFIYVN 386
Query: 112 GDDNEVV 118
D+N V+
Sbjct: 387 QDENTVI 393
>UniRef50_Q54RH1 Cluster: Putative uncharacterized protein; n=4;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 512
Score = 31.5 bits (68), Expect = 6.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 101 FHCHTTVLQRNGDDNEVVGCLDVTFEFKANND 132
+H +T RN +D++++ C D + F +NND
Sbjct: 360 YHSNTFKYSRNLNDDQLIDCTDSSISFTSNND 391
>UniRef50_Q1E2W9 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 851
Score = 31.5 bits (68), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 85 YLFSYEELPHAGLYGSFHCHTTVLQRN-GDDNEVVGCLDVTF 125
YL EEL HA LY F VL N D++E+V +D +
Sbjct: 355 YLLEDEELAHAPLYQLFQAFRKVLGSNVSDEDELVASIDCLY 396
>UniRef50_O06916 Cluster: Spectinomycin phosphotransferase; n=6;
Legionella pneumophila|Rep: Spectinomycin
phosphotransferase - Legionella pneumophila
Length = 331
Score = 31.1 bits (67), Expect = 8.2
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 22 YGIEIKVCKFVDGGC--KPFTVLKD-ESFTKFVE----YH--IGKNVEKILSAAGVEPAR 72
YGI+I +F+ GG F D ES + F++ YH I ++ ++L +G++
Sbjct: 19 YGIDIHTAQFIQGGADTNAFAYQADSESKSYFIKLKYGYHDEINLSIIRLLHDSGIKEII 78
Query: 73 FPIEPCEKKI 82
FPI E K+
Sbjct: 79 FPIHTLEAKL 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.321 0.142 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,083,013
Number of Sequences: 1657284
Number of extensions: 6579913
Number of successful extensions: 10730
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 10726
Number of HSP's gapped (non-prelim): 8
length of query: 136
length of database: 575,637,011
effective HSP length: 92
effective length of query: 44
effective length of database: 423,166,883
effective search space: 18619342852
effective search space used: 18619342852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 67 (31.1 bits)
- SilkBase 1999-2023 -