GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002302-TA|BGIBMGA002302-PA|undefined
         (57 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5FTR5 Cluster: Putative uncharacterized protein; n=7; ...    32   2.0  
UniRef50_A7R1A6 Cluster: Chromosome undetermined scaffold_343, w...    31   6.0  

>UniRef50_Q5FTR5 Cluster: Putative uncharacterized protein; n=7;
           Proteobacteria|Rep: Putative uncharacterized protein -
           Gluconobacter oxydans (Gluconobacter suboxydans)
          Length = 323

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 1   MFVRTIPSILGHKNFIIHRSFSHRPISVAIDSENGSLRFFEEIRADDN 48
           +FVR +P +  H   +     S RP+++  D + G++RF +E  +  N
Sbjct: 114 IFVRAVPDLGAHVATLKTARESRRPVTLLTDLDTGNMRFCDEAYSTGN 161


>UniRef50_A7R1A6 Cluster: Chromosome undetermined scaffold_343,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_343, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 1226

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 5   TIPSILGHKNFIIHRSFSHRPISVAIDSENGSLRFFEEIRADDN 48
           TIP  LG  + ++    S  P++  + S  GSLRF   +   +N
Sbjct: 178 TIPETLGRLSKLVEIELSENPLTGVLPSSMGSLRFLRFLMISNN 221


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.326    0.138    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,967,408
Number of Sequences: 1657284
Number of extensions: 1974489
Number of successful extensions: 4914
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4911
Number of HSP's gapped (non-prelim): 3
length of query: 57
length of database: 575,637,011
effective HSP length: 37
effective length of query: 20
effective length of database: 514,317,503
effective search space: 10286350060
effective search space used: 10286350060
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 65 (30.3 bits)