GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002302-TA|BGIBMGA002302-PA|undefined
         (57 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   2.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   5.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    19   5.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    18   6.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    18   6.9  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    18   6.9  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    18   6.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    18   9.1  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.8 bits (39), Expect = 2.2
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 16  IIHRSFSHRPISVAIDSENGSLRFFEEIRADDNAGQACSV 55
           +I+  F + PI V+ID  N +L       +D NA +  S+
Sbjct: 284 VINAGFLNCPIEVSID--NHTLSVISTDGSDFNATEVDSL 321


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 18.6 bits (36), Expect = 5.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 5   TIPSILGHKNFIIHRSFSHRPISVAIDSENGSLRFFEEIR 44
           T   ++   + IIH S S    +V I+S     +F E IR
Sbjct: 431 TTSILINVPSLIIHVSTSAYVATVWINSVINRWKFIEFIR 470


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 18.6 bits (36), Expect = 5.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 27  SVAIDSENGSLRFFEEIRADDNAGQAC 53
           S +    +G+L +  EI  DD    AC
Sbjct: 243 SFSCSCPSGTLGYICEINVDDCRPGAC 269


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
          protein.
          Length = 237

 Score = 18.2 bits (35), Expect = 6.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 6  IPSILGHKNFIIHRSFSHRPISVAID 31
          I S+LG +NF     F   P   + D
Sbjct: 14 IYSVLGQENFKCPDDFGFYPHHTSCD 39


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
          protein.
          Length = 274

 Score = 18.2 bits (35), Expect = 6.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 6  IPSILGHKNFIIHRSFSHRPISVAID 31
          I S+LG +NF     F   P   + D
Sbjct: 14 IYSVLGQENFKCPDDFGFYPHHTSCD 39


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
          transcription factor protein.
          Length = 193

 Score = 18.2 bits (35), Expect = 6.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 19 RSFSHRPISVAIDSEN 34
          RSF  +  S++ D EN
Sbjct: 60 RSFGRKRKSISSDEEN 75


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 18.2 bits (35), Expect = 6.9
 Identities = 7/29 (24%), Positives = 15/29 (51%)

Query: 6   IPSILGHKNFIIHRSFSHRPISVAIDSEN 34
           + + +G   F++HR+  + P     D +N
Sbjct: 84  VGTTVGIGQFLVHRNPKYFPNPDKFDPDN 112


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 17.8 bits (34), Expect = 9.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 16  IIHRSFSHRP 25
           +I+R FSH P
Sbjct: 691 LIYRPFSHFP 700


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.138    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,562
Number of Sequences: 317
Number of extensions: 410
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 57
length of database: 114,650
effective HSP length: 37
effective length of query: 20
effective length of database: 102,921
effective search space:  2058420
effective search space used:  2058420
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.8 bits)
S2: 34 (17.8 bits)