GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002302-TA|BGIBMGA002302-PA|undefined
         (57 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   2.7  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    19   4.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    19   4.7  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              18   8.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              18   8.3  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    18   8.3  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 3   VRTIPSILGHKNFIIHRSFSHRPISV 28
           V ++   LG+   I+  +FS  P++V
Sbjct: 495 VLSVKRELGNDTVIVMMNFSKNPVTV 520


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 14  NFIIHRSFSHRPISV 28
           N ++  SFSHR I V
Sbjct: 272 NELLIASFSHRSIDV 286


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 14  NFIIHRSFSHRPISV 28
           N ++  SFSHR I V
Sbjct: 272 NELLIASFSHRSIDV 286


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 32  SENGSLRFFEEIRA 45
           S NG L FF+ I A
Sbjct: 90  SLNGMLTFFQRIPA 103


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 6  IPSILGHKNFIIHRSFSHRPISVAIDSENGSL 37
          + S+ G+K+   HR F+      A  S + SL
Sbjct: 22 VVSVAGYKHSRRHRDFTVAESYDASSSNSDSL 53


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
          protein.
          Length = 190

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 12 HKNFIIHRSFSHRPISVAIDSENGSLRFFEEIRADDNAGQA 52
          H N ++HR      + +A  ++  +++  +   A +  G+A
Sbjct: 26 HHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEA 66


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.326    0.138    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,672
Number of Sequences: 429
Number of extensions: 482
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 57
length of database: 140,377
effective HSP length: 37
effective length of query: 20
effective length of database: 124,504
effective search space:  2490080
effective search space used:  2490080
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.3 bits)
S2: 35 (18.2 bits)