Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002301-TA|BGIBMGA002301-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine
(186 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 32 0.045
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 31 0.10
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 29 0.56
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 28 0.73
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 27 1.7
SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces pombe... 27 1.7
SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces po... 26 3.0
SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr 1... 26 3.9
SPAC17G6.11c |||glucosidase |Schizosaccharomyces pombe|chr 1|||M... 25 5.2
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 25 5.2
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 25 6.8
SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase Rdp1|Schizosa... 25 6.8
SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit S... 25 9.1
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex subunit
Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 32.3 bits (70), Expect = 0.045
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 13 IFEVIRQLKNAKVATESAYELDYLKIIKWSWIDIAIVKVESEYDFNDEKYTQLCSYKPAI 72
+F+ +++N ++ E A L KI++ IA V ES+ + N+E+Y S+KP++
Sbjct: 987 VFQEKSEVENQRMKEELAGPL---KILQEMARRIAKVSKESKQELNEEEYVN--SFKPSL 1041
Query: 73 IDVNYA 78
++V YA
Sbjct: 1042 MEVVYA 1047
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.1 bits (67), Expect = 0.10
Identities = 22/93 (23%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 93 WGHKEKWRKPEDVSNYNQDTLNYAPIMLQNKEKCTEAYKDIER-MNILIDNYMICAD-GK 150
W +E+ +++ +Y + NY ++Q+K + E K+I++ + + +++M A+
Sbjct: 967 WLERERSILIDELESYRSNQFNYQNNLVQDKNELEERLKEIQKELEVYNNHFMKQAELMT 1026
Query: 151 GNINAKGEQILKGKPEADGCATNP-ENLKGILD 182
N+ + + +LK EA TN ++L IL+
Sbjct: 1027 SNVTDESQLMLKTLREALQSKTNNIDHLSTILE 1059
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 28.7 bits (61), Expect = 0.56
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 111 DTLNYAPIMLQNKEKCTEAYKDIERMNILIDNYMICAD 148
D+L YA I NKE +AY + N+LID+ I D
Sbjct: 283 DSLQYAFIEFDNKESVEKAY--FKMQNVLIDDSRIHVD 318
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 28.3 bits (60), Expect = 0.73
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 150 KGNINAKGEQILKGKPEADGCATNPENLK 178
KGNI+A E +L KPE+ T P LK
Sbjct: 571 KGNIDATVEVVLTEKPESSSTLTLPLELK 599
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 18 RQLKNAKVATESAYELDYLKIIKWSWIDIAIVKVESEYDF 57
R++ + + A+E A+E D K IK A++ +E+E+ F
Sbjct: 282 REIADRRSASEQAHEADDEKAIKRKEAFDALLNIETEFTF 321
>SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 548
Score = 27.1 bits (57), Expect = 1.7
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 87 DALVLGWGHKEKWRKPEDVSNYNQDTLNYAPIMLQNKEKCTEAYKDIERMNILIDNYMIC 146
D V W H W D + + L P ML NK +A+KD + ++ D+++ C
Sbjct: 428 DIFVYLWRHS--WSNGIDYAKWISVAL---PSMLSNKV-FFKAFKDFDAWKVVYDDFIKC 481
Query: 147 ADGKGNINAKGEQILKGKPEADG 169
D + + IL E DG
Sbjct: 482 NDDLKGDKSFNDYILSTN-EEDG 503
>SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 547
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 56 DFNDEKYTQLCSYKPAIIDVNYARKYQEPGTDALVLGWG 94
DF DEK QL S + Y G + L++G+G
Sbjct: 209 DFQDEKSVQLISQELVAKGNQLFNNYGPKGNEELLMGYG 247
>SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 996
Score = 25.8 bits (54), Expect = 3.9
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 52 ESEYDFNDEKYTQLCSYKPAIIDVNYARKYQEPGTDALVLGWGHKEKWRKPEDVSNYNQD 111
+S +D ++Y ++C K + AR+Y P + + PE Y D
Sbjct: 368 QSTHDIAPDRYVEVCGAKFHNLSYQLARQYALPVKGVFISEPAGSFRLEGPE--YGYILD 425
Query: 112 TLNYAPIMLQNKEKCTEAYKDI-ERMNILIDNYMI 145
++ Y P+ + + E +DI +R + + + I
Sbjct: 426 SIAYKPV--PDLDTFIEVMRDIPDRSRVAVGYHFI 458
>SPAC17G6.11c |||glucosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 70 PAIIDVNYARKYQEPGTDALVLGWGHKEKWRKPEDVSNYNQDTLNY 115
P + V+Y R YQ+ + VLG E + E ++N+ + LNY
Sbjct: 571 PQTMYVDYVRIYQDSSDSSSVLGC-DPEGFPTTEYIANHPKAYLNY 615
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 5.2
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 79 RKYQEPGTDALVLGWGHKEKWRKPEDVSNYNQDTLNYAPIMLQNKEKCTEAYKDIERMNI 138
R+YQE + + W ++ D + +++ +N PIM C K+ N
Sbjct: 231 RQYQETFKNQSIASWTIIDQEETSSDDESLSKEIVNSNPIM------CMVCNKNFRSQNQ 284
Query: 139 LIDNYMICADGKGNINAKGEQILKGKPEA 167
L +N+ K N+ ++I K EA
Sbjct: 285 L-ENHENSKKHKKNLRKMNQEIKKHAKEA 312
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 93 WGHKEKWRKPEDVSNYNQDTLNYAPIMLQN 122
W + E W + ++N D LN + L+N
Sbjct: 305 WSNSETWDPHRSIRSFNLDLLNSSFFSLKN 334
>SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase
Rdp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1215
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 93 WGHKEKWRKPEDVSNYNQDTLNYAPIMLQNKEKCTEAYKDIERMNILIDNYMI 145
W WR+ D+ +N +PI L N C A I R N+L+ ++ I
Sbjct: 283 WTASHLWRRHYDILPFNVSPTTASPIELLN---CHNA--PIGRCNVLVLSFSI 330
>SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit
Spo6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 24.6 bits (51), Expect = 9.1
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 108 YNQDTLNYAPIMLQNK----EKCTEAYKDIER 135
++ D L + + ++ K E C E YKD+ER
Sbjct: 409 FDADPLAHKKVKIETKSGYCENCCERYKDLER 440
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 949,571
Number of Sequences: 5004
Number of extensions: 41623
Number of successful extensions: 80
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 75
Number of HSP's gapped (non-prelim): 13
length of query: 186
length of database: 2,362,478
effective HSP length: 69
effective length of query: 117
effective length of database: 2,017,202
effective search space: 236012634
effective search space used: 236012634
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)
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