Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002300-TA|BGIBMGA002300-PA|IPR000306|Zinc finger,
FYVE-type, IPR011011|Zinc finger, FYVE/PHD-type
(1015 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 79 4e-15
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 57 1e-08
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 55 4e-08
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 52 3e-07
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 50 2e-06
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 35 0.066
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 31 0.61
SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase |Schizosac... 31 0.81
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 31 0.81
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 31 1.1
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 31 1.1
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 30 1.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 1.9
SPAC19G12.02c |pms1||MutL family mismatch-repair protein Pms1|Sc... 30 1.9
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 29 3.3
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 29 4.3
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 29 4.3
SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor Crm1|... 29 4.3
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 28 5.7
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 28 7.6
SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces pom... 28 7.6
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 28 7.6
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 28 7.6
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 28 7.6
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 28 7.6
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 28 7.6
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 10.0
SPCC24B10.21 |tpi1|tpi|triosephosphate isomerase|Schizosaccharom... 27 10.0
SPAC2F7.06c |pol4||DNA polymerase X family|Schizosaccharomyces p... 27 10.0
SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces... 27 10.0
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 27 10.0
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 10.0
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated membrane
proteins, ESCRT 0 complex|Schizosaccharomyces pombe|chr
1|||Manual
Length = 610
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 936 PEWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEE 995
P+W + C+RC FT R+HHCRNCG VFC CSS ++ LP G +PVRVC+
Sbjct: 168 PDWTD---SEVCLRCRTPFTFTNRKHHCRNCGGVFCNQCSSKTLSLPHLGINQPVRVCDS 224
Query: 996 CFRSIATTCRRAQTANQNHR 1015
C+ S+ T + +++ +N R
Sbjct: 225 CY-SLRTKPKGSKSRARNER 243
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEECF 997
W+ D C C+ FT FRR+HHCR CGK+ C C + P + ++VC C
Sbjct: 57 WMKDERTNNCSLCETEFTLFRRKHHCRICGKIICKYCLKEA-PGFIFRLQGSIKVCRPCA 115
Query: 998 RSIATTCRRAQTANQN 1013
+ R+Q N +
Sbjct: 116 SILVNNYSRSQLFNHS 131
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLP 982
W D + C C FT FRRRHHCR CGK+FC +C ++ LP
Sbjct: 24 WQLDDESAQCNNCGGPFTWFRRRHHCRWCGKLFCYNCCNSFAKLP 68
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering component
Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEEC- 996
W D C C+ FT RRR HCR CG+V C C I LP++ Q P+ +C C
Sbjct: 272 WQDDSVVQICPECNNSFTLTRRRRHCRLCGRVICRFCVL-EISLPQHPQ--PLLICMSCN 328
Query: 997 ---FRSIATTCRRAQT 1009
FR++ R+++
Sbjct: 329 QNYFRNVLYQTERSKS 344
Score = 34.7 bits (76), Expect = 0.066
Identities = 20/67 (29%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Query: 938 WVPDIAAPACM--RCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKP-----V 990
W P++ C CD HCR CG +FC S I L +
Sbjct: 131 WQPEVPDMVCHDPMCDKLLNFINGHIHCRKCGYIFCNFHSMYQIKLSIHATYDSENGFWC 190
Query: 991 RVCEECF 997
RVC EC+
Sbjct: 191 RVCRECY 197
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 938 WVPDIAAPACM--RCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPL 981
W PD C C F F RRHHCR CG +FCA +IPL
Sbjct: 151 WKPDSDVSVCSFPSCSVRFGLFDRRHHCRRCGDIFCALHCDRNIPL 196
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 34.7 bits (76), Expect = 0.066
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Query: 276 SEPTITDADYLPDNIEVMTPIIDGLRRLTEFADTHDESSDHEKPRHSIDTASTDTFQTDY 335
SE + YLP +E TP+ D L + T+ E ++T +TF +
Sbjct: 509 SEHVLRMHRYLPPGVEPGTPVRDSLNSVLNVGATNAAGVSTENVEQEVETPVWETF-SSL 567
Query: 336 IDRSRKTSKTENSDLSSLRNLSTNGLMMFDPLVINAAASTSNDVNRQLPDHDL 388
+ + +T K E +++ +R P++ A A ++ L + DL
Sbjct: 568 LHANARTKKKELLNINFVRKYIQYAKSRIHPILNQATAEYITNIYCGLRNDDL 620
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 31.5 bits (68), Expect = 0.61
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 12/63 (19%)
Query: 941 DIAAPACMRCDAHFTAFRRRHHCRNCGKV-FCASCSSNSIPLPRYGQLKP--VRVCEECF 997
D + C CD+ F+ R CR CG C+ C S LK ++ C EC+
Sbjct: 2550 DNTSELCSLCDSRFSLMEWRSQCRACGNSNVCSDCVS---------MLKDTNIKTCYECY 2600
Query: 998 RSI 1000
R +
Sbjct: 2601 RQM 2603
>SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 394 EQVTEIADRLSSIAASDVDIVDQMHSFSTNDVTGLISVDEQAYGYS 439
E+ + A RLSS ASDVD + Q+H N + + Y YS
Sbjct: 572 ERPSRFARRLSSSVASDVDNLSQLHDTDLNSEVSAPAPLQNVYLYS 617
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 238 LNSDTPEDSSCPYPDIEEFVSRFYTDYAHCRDLYAQSSSEPTITDADYLPDNIEVMTPII 297
+ +D+ + S P P +E+ S + Y + R ++ ++ T + Y PD++ P I
Sbjct: 448 VRTDSLDLQSLPTPTLEQLESVPFNRYGYVR-IFPSTTLSSTASGY-YTPDSLSTPEPSI 505
Query: 298 DGLRRLTE 305
DGL L +
Sbjct: 506 DGLTNLDD 513
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 528 RQDESADDSTSFHSAKMTLDTEDDRVKFMLGYESEHESPVDSGVSTENTSLDRSPDSDQS 587
+QD+S+ + S + + + ESE E P V+ S S S++
Sbjct: 32 KQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEE 91
Query: 588 KEIKGSLQNRVLIPEESSFDTVNINYAEEEGQKNE 622
+E + + V +ES ++ + + +EEE + E
Sbjct: 92 EETESEEDSEV--SDESESESESESESEEESESEE 124
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 30.7 bits (66), Expect = 1.1
Identities = 53/277 (19%), Positives = 106/277 (38%), Gaps = 19/277 (6%)
Query: 404 SSIAASDVDIVDQMHSFSTNDVTGLISVDEQAYGYSGPRNEQLSCMPSTSHGYLIPNAIS 463
SS + S+ D S S++D S ++ S +E S+S G ++ S
Sbjct: 114 SSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSES----ESSSEGSDSSSSSS 169
Query: 464 HEPAVMSSLSHNNSAVFNDETSEANDPLNTDLPLIIPENIDADIVNTNICKANANLSMLL 523
+ SS +++S+ +D SE++ ++D + +D + + + + + S
Sbjct: 170 SSESESSSEDNDSSSSSSDSESESSSE-DSD-----SSSSSSDSESESSSEGSDSSSSSS 223
Query: 524 TEEFRQDESADDSTSFHSAKMTLDTEDDRVKFMLGYESEHESPVDSGVSTENTSLDRSPD 583
+ E +DS+S S + + +D +SE ES S+ N+S
Sbjct: 224 SSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDS 283
Query: 584 SDQSKEIKGSLQNRVLIPEESSFDTVNINYAEEEGQKNEACSSNIDVRLXXXXXXXXXXR 643
S S + + + E+S D+ + + + +E +SN D
Sbjct: 284 SSDSSDSESESSS-----EDS--DSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTN 336
Query: 644 RVLQEWGANASEVEYSTIEEVITELRRHRESDKKISS 680
E + + + S I + L+R E D+ +S
Sbjct: 337 STSSEESTSVKDEDSSKIHD--KSLKRKHEDDESSTS 371
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 30.3 bits (65), Expect = 1.4
Identities = 67/344 (19%), Positives = 123/344 (35%), Gaps = 10/344 (2%)
Query: 222 TNEDITNLAALGLPSPLNSDTPEDSSCPYPDIEEFVSRFYTDYAHCRDLYAQSSSEPTIT 281
T D T + S L+S T SS P S F T + +S TI+
Sbjct: 705 TYSDPTTTITSEVSSILSSPTSMQSSVSRPQSSGDASGFNTIFTSISQSSDGETSGYTIS 764
Query: 282 DADYLPDNIEVMTPIIDGLRRLTEFADTHDESSDHEKPRHSIDTASTDTFQTDYIDRSRK 341
E T T T S + S++++ + ++ + S
Sbjct: 765 SNSSQNSASEPQTAFTSSSSSATPTI-TQSSISTSVSSQSSMNSSYSSPISSNSVTSSTS 823
Query: 342 T-SKTENSDLSSLRNLSTNGLMMFDPLVINAAASTSNDVNRQLPDHDLVTSLNEQVTEIA 400
S +S +S+ ++S+ FD + S N + S +E + +
Sbjct: 824 IISSIASSSYTSIPSISSIASSFFDA---SGFTSIYNGTKAGFSSSFALASNSE--SGAS 878
Query: 401 DRLSSIAASDVDIVDQMHSFSTN-DVTGLISVDEQAYGYSGPRNEQLSCM-PSTSHGYLI 458
D LSS A +S ST+ + S +E YS S + PS +
Sbjct: 879 DVLSSTIAKPTFKFSTSNSGSTSYSIPSSSSRNEGTTSYSSNITVTSSTLKPSLTSSVST 938
Query: 459 PNAISHEPAVMSSLSHNNSAVFNDET-SEANDPLNTDLPLIIPENIDADIVNTNICKANA 517
++ A ++LS + T SE+ +NT+ + PE+ + + + +++
Sbjct: 939 ASSYIASSASSNTLSTEPKTFSSSSTLSESISSINTNSLTVKPESSLSSSTTSGLTSSSS 998
Query: 518 NLSMLLTEEFRQDESADDSTSFHSAKMTLDTEDDRVKFMLGYES 561
+ E + ++ S S S+ T + + VK ++ ES
Sbjct: 999 TIPSSTRSESNSESASTSSASKRSSSSTSLVQSNPVKTVVSLES 1042
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 1.9
Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 13/200 (6%)
Query: 436 YGYSGPRNEQL------SCMPSTSHGYLIPNAISHEPAVMSSLSHNNSAVFNDETSEAND 489
YGY+ P + S PS ++ Y P + +PA +S ++++ F+ +SE
Sbjct: 73 YGYATPTSSSEPSIFSESATPSETNSYSSPVSSYSDPA--TSQLPSSTSFFSPTSSEYTP 130
Query: 490 PLNTDLPLIIPENIDADIV--NTNICKANANLSMLLTEEFRQDESADDSTSFHSAKMTLD 547
L+ P ++ + I+ +T++ + ++ S+ ++ + S+S S++ ++
Sbjct: 131 SSTESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVS 190
Query: 548 TEDDRVKFMLGYESEHESPVDSGVSTENTSLDRSPDSDQSKEIKGSLQNRVLIPEESSFD 607
+ S S + S ++S SP S S + S + IP SS
Sbjct: 191 STSSSTFSSAAPTSTSSSYLSSSSVVSSSS---SPSSSSSSTLTSSSLSTSSIPSTSSSS 247
Query: 608 TVNINYAEEEGQKNEACSSN 627
+ + + A SS+
Sbjct: 248 SSTSSSLSSSSSSSTASSSS 267
Score = 29.1 bits (62), Expect = 3.3
Identities = 48/258 (18%), Positives = 94/258 (36%), Gaps = 9/258 (3%)
Query: 357 STNGLMMFDPLVINAA---ASTSNDVN---RQLPDHDLVTSLNEQVTEIADRLSSIAASD 410
ST + DP +++A +STS +V+ L D +TS + S + S
Sbjct: 132 STESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSS 191
Query: 411 VDIVDQMHSFSTNDVTGLISVDEQAYGYSGPRNEQLSCMPSTSHGYL-IPNAISHEPAVM 469
+ T+ + +S S P + S + S+S IP+ S +
Sbjct: 192 TSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTS 251
Query: 470 SSLSHNNSAVFNDETSEANDPLNTDLPLIIPENIDADIVNTNICKANANLSMLLTEEFRQ 529
SSLS ++S+ +S ++ +++ + ++++ +++ S T
Sbjct: 252 SSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSS 311
Query: 530 DESADDSTSFHSAKMTLDT--EDDRVKFMLGYESEHESPVDSGVSTENTSLDRSPDSDQS 587
S+ S++ S+ M+ + S SP S S+ +S S +
Sbjct: 312 SSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSST 371
Query: 588 KEIKGSLQNRVLIPEESS 605
S + L SS
Sbjct: 372 VSSSSSTSSSTLTSSSSS 389
>SPAC19G12.02c |pms1||MutL family mismatch-repair protein
Pms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 794
Score = 29.9 bits (64), Expect = 1.9
Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 15/232 (6%)
Query: 137 RRALKQNLLAQEQVDSYDPALMFAVPRLAIVSGLLIYSSGPLSINKPPEEMSVMFRPFRT 196
RR + +A+ + + P M P AI L ++G + IN P++ SV +
Sbjct: 262 RRLVNLPKIARVIQEVFKPYSMAQSPFFAIN---LRITNGTIDINVSPDKKSVFLSEEDS 318
Query: 197 LLNKIRSLLWTXXXXXXXXXXXXXCTNEDITNLAALGLPSPLNSDTPEDSSCPYPDIEEF 256
++ I++ L C+ + +P T ++ P E
Sbjct: 319 IIEFIKNSLQNLCESCGHAIS---CSRSQSIFSYSSQIPDSSGDSTDQELPQSIPATESE 375
Query: 257 VS---RFYTDYAHCRDLYAQSSSEPTITDADYLPDNI-EVMTPII-----DGLRRLTEFA 307
S F + C+ +++++P I+ + ++ +V P+ D +RR +
Sbjct: 376 TSDDSSFSYKRSPCKRKLVEATAQPAISTSVAEGASLAQVSKPLPERLQKDSMRRSSPLN 435
Query: 308 DTHDESSDHEKPRHSIDTASTDTFQTDYIDRSRKTSKTENSDLSSLRNLSTN 359
+ SS+ K + ++ +STDT ID S + N S+ NL N
Sbjct: 436 EKVTASSERMKKKLALFASSTDTSMQKTIDSSFPLKQPINKPSSNPNNLLLN 487
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 303 LTEFADTHDESSDHEKPRHSIDTASTDTFQTDYID-----RSRKTSKTENSDLSSLRNLS 357
L++ +T+D+ ++ + +DT+++D FQ +D + N LSS +S
Sbjct: 1690 LSQELETNDQDIEYNEFYSQLDTSTSDIFQDTSVDGFPDLQVSSDINVRNDRLSSF-VMS 1748
Query: 358 TNGLMMFD--PLVINAAASTSNDVNRQLPDHDLVTSLNE 394
+ L D P ++ T + V+ + P + +V +LNE
Sbjct: 1749 SEDLRSSDGHPENSDSVLETISSVHHRSPINQVVRNLNE 1787
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Query: 463 SHEPAVMSSLSHNNSAVFNDETSEANDPLNTDLPLIIPENIDADIVNTNICKANANLSML 522
S +P+V S++ + A+ + A N+ + + PEN+D DI + I + +S
Sbjct: 964 SEKPSVDESITEVDDAIKDGPPVLAETLTNSLMEDVGPENVDMDIEDNEIFTNQSTMS-- 1021
Query: 523 LTEEFRQDESADDSTSFHSAKMTLDTEDDRVKFMLGYESEHESPVDSGVSTENTSLDRS 581
+ ++E + + K + + K +G SE V + VST +S R+
Sbjct: 1022 VPSMLVENEESPKPDEYIDQKDKVQSPLLNGKSPVGVPSEAALRVSTDVSTNISSNGRA 1080
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 28.7 bits (61), Expect = 4.3
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 13/169 (7%)
Query: 304 TEFADTHDESSDHEKPRHSIDTASTDTFQTDYIDRSRKTSKTENSDLSSLRNLSTNGLMM 363
T DT ++ E+P I S ++ T + S+ TS ++D SS ++ +
Sbjct: 616 TTSKDTKSATTTDERPSDFIRLNSEESVGTSSLRTSQTTSTIVSNDSSSTASIPSQISR- 674
Query: 364 FDPLVINAAASTSNDVNRQLPDH-DLVTSLNEQVTEIADRLSSIAASDVDIVDQMHSFST 422
I+ S ND N H V S + + ++ + +++ I DQ +T
Sbjct: 675 -----ISQVNSLLNDYNYNRQSHITRVYSGTDDGSSVSIFEDTSSSTKQKIFDQP---TT 726
Query: 423 NDVTGLISVDEQAYGYSGPRNEQLSCMPSTSHGYLIPNAISHEPAVMSS 471
ND + + Y YS S +PST H L ++ S +V ++
Sbjct: 727 NDCDVM---RPRQYSYSAGMKSDGSLLPSTKHTSLSSSSTSTSLSVRNT 772
>SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor
Crm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1078
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 496 PLIIPENIDADIVNTNICKANANLSMLLTEEFRQDESADDSTSFHSAKM 544
P IPE + A N ++C+ N + LL+EE D SA+ T + +
Sbjct: 135 PNFIPEIVQASKTNLSLCENNMIVLRLLSEEI-FDYSAEQMTQLKTKNL 182
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 600 IPEESSFDTVNINYAEEEGQKNEACSSNIDVRLXXXXXXXXXXRRVLQEWGANASEVEYS 659
+ ++S + + NY ++ + +E+C N + +++E SE E S
Sbjct: 180 LEKQSDYSELLDNYKKQLNKASESCKGNYQACIESRSTLITSLESLIEEQKKLLSEEEES 239
Query: 660 --TIEEVITELRRHRESDKKISSL 681
++E +I+ L ++ES S+L
Sbjct: 240 LKSVESIISNL-ENKESTTATSTL 262
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 382 QLPDHDLVTSLNEQVTEIADRLSSIAASDVDIVDQMHSFSTNDVTG 427
++ +H++ + + S+A+ D D D+ H FS N +G
Sbjct: 119 EIDEHEIPIPKKRKSKPAPKQKKSVASDDEDAYDKRHRFSINSASG 164
>SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 329
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 448 CMPSTSHGYLIPNAISHEPAVMSSLSHNNSAVFNDETSEANDPLNTDLPLIIPENIDADI 507
C+ T+ G IP+A + E V S S ++ E+ PL + EN ++
Sbjct: 152 CLQKTNKGIAIPDAETFEWLVCSECSEKYRDHLLNQKHESIAGTER-APLFLSENFRENL 210
Query: 508 VNTNICKA--NANLSMLLTEE--FRQDESADDSTS 538
C + N + ML+ EE + E ++D S
Sbjct: 211 CPCESCISLRNLEMPMLVAEEPIYEPPEDSEDGIS 245
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 236 SPLNSDTPEDSSCPYPDIEEFVSRFYTDYAH---CRDLYAQS--SSEPTITDAD 284
S L+S +S+ YPD++ V+ F + Y+H RD+ ++S EP++ DA+
Sbjct: 457 SNLSSTPRSNSTITYPDMDPMVASFSSQYSHKTLDRDINSRSYFDREPSL-DAE 509
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 228 NLAALGLPSPLNSDTPEDSSCPYPDIEEFVSRFYTDYAH 266
N AA L +P + T S CPY ++F+ RF Y H
Sbjct: 1450 NTAAGNLLNP--NATTSCSYCPYQTADQFLERFSMRYTH 1486
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 280 ITDADYLPDNIEVMTPIIDGLRRLTEFADTHDESSD 315
ITD +YLP ++ V +P+++ ++ T E S+
Sbjct: 268 ITDENYLPVSLPVYSPVLNSFDDSDSYSSTDSELSE 303
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 27.9 bits (59), Expect = 7.6
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 16/188 (8%)
Query: 333 TDYIDRSRKTSKTENSDLSSLRNLSTNGLMMFDPLVINAAASTSNDVNRQLPDHDLVTSL 392
T I + S + L++ ST P + ++ ND+ R+ P HDL+ S
Sbjct: 443 TSSISDTSSNSSAPHEQLNATSLASTVDESSRSPPLPEVESNKENDIKRKQPFHDLMDSS 502
Query: 393 NEQVTEIADRLSSIAASDVDIVDQMHSFSTNDVTG-LISVDEQAYGYSGPRNEQLSCMPS 451
+ + A+ A SD ++ Q S S N G +IS+ + N L +P
Sbjct: 503 SPDDSSFAN-----AKSDEEV--QKPSVSKNIADGAVISIPKPLTPKPSDSN-SLYPLPH 554
Query: 452 TSHGYL--IPNAISHEPAVMSSLSHNNSAVFNDETSEANDPLNTDLPLIIPENIDADIVN 509
+ G IP P+++S L N + S P+ ++ P + + D+
Sbjct: 555 SKVGRRKNIPAITVPPPSILSILRKN----IGKDISSIPAPVVSNEPCNLLQRCAEDLEY 610
Query: 510 TNIC-KAN 516
+N+ KAN
Sbjct: 611 SNMLDKAN 618
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 549 EDDRVKFMLGYESEHESPVDSGVSTENTSLDRSPDSDQSKEI 590
++ ++K + E EH P G+S EN+ D D D I
Sbjct: 950 DEAKLKLLAEQEDEHLHPEKEGMSVENSDDDYHDDLDYEDSI 991
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 27.5 bits (58), Expect = 10.0
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 524 TEEFRQDESADDSTSFHSAKMTLDTEDDRVKFMLGYESEHESPVDSGVSTENTSLDRSPD 583
+E+F +DE+ D + A + D E S SP S S+ L +
Sbjct: 205 SEDFAEDENLYDELNLDEASASYDAERSG---RSSSSSHSPSPSASSSSSSENLLQDKAE 261
Query: 584 SDQSKEIKGSLQNRVLIPEESSFDT---VNINYAEEEGQKNEA 623
+++ S+Q+ I E+ S D + N E++ ++N+A
Sbjct: 262 AEEKVSADASVQD---IAEKESLDADKELATNDQEDDEEENQA 301
>SPCC24B10.21 |tpi1|tpi|triosephosphate
isomerase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 249
Score = 27.5 bits (58), Expect = 10.0
Identities = 21/91 (23%), Positives = 34/91 (37%)
Query: 534 DDSTSFHSAKMTLDTEDDRVKFMLGYESEHESPVDSGVSTENTSLDRSPDSDQSKEIKGS 593
D T M L T +VK +G +++ +G T S D+ + + G
Sbjct: 36 DVETVIFPQNMYLITTRQQVKKDIGVGAQNVFDKKNGAYTGENSAQSLIDAGITYTLTGH 95
Query: 594 LQNRVLIPEESSFDTVNINYAEEEGQKNEAC 624
+ R + E F +A E+G AC
Sbjct: 96 SERRTIFKESDEFVADKTKFALEQGLTVVAC 126
>SPAC2F7.06c |pol4||DNA polymerase X family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 506
Score = 27.5 bits (58), Expect = 10.0
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 260 FYTDYAHCRDLYAQSSSEPTITDADYLPDNIEVMTPIIDGLRR 302
FY D+ C+ + + ++E T +PD I++ + ++ G RR
Sbjct: 308 FYEDF--CKTVTIEEATEIYETIVSRMPDGIKIQSCLVGGFRR 348
>SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 684
Score = 27.5 bits (58), Expect = 10.0
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 16/146 (10%)
Query: 291 EVMTPIIDGLRRLTEFADTHDE--------SSDHEKPRHSIDTASTDTFQTDYIDRSRKT 342
E+ T I D L + E DT S + K S + T++ +Y+ R+
Sbjct: 332 EIATSICDKLGEILERTDTERSYPLQAMIPSISNTKNAESSSQKAVRTYE-NYLVRTDPR 390
Query: 343 SKTENSDLSSLRNLSTNGLMMFDPLVINAAASTSNDVNRQLPDHDLVTSLNEQVTEIADR 402
++ S LS N +D +I S +++ N DL T E++ E +
Sbjct: 391 ERSIKSMLSD--NFLQRSSNNYDNEIIEKVDSANSNKNATNDIKDLQT---EEIVEEGNS 445
Query: 403 --LSSIAASDVDIVDQMHSFSTNDVT 426
L SI + +++ MH +TN +T
Sbjct: 446 IDLESIKSLQKQVINSMHVLATNILT 471
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 27.5 bits (58), Expect = 10.0
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 453 SHGYLIPNAISHEPAVMSSLSHNNSA----VFN-DETSEANDPLNTDLPLIIPENI-DAD 506
SH I +V SLS + S VF+ +++E N P+ D+ +NI D+
Sbjct: 138 SHQIYIQGETKSPSSVSQSLSGDPSLKPAEVFDRKQSAEINSPIEKDVNP--QQNISDSS 195
Query: 507 IVNTNICKANANLSML--LTEEFRQDESADDSTSFHSAKMTLDTEDDRVKFMLGYESEHE 564
I N +I N + LT +ES + + ++D+ + E+E E
Sbjct: 196 IKNNSIHSDEVNPEVRPDLTPSNENEESKRSAPEIALKEKESTSQDESNR-----EAE-E 249
Query: 565 SPVDSGVSTENTSLDRSPDSD-QSKEIKGSLQNRVLIPEESSFD 607
+P+ + S ++SL+ PD + QS ++ ++ L+ SSF+
Sbjct: 250 APISTNYSFPSSSLEDQPDKNVQSSAVENKNKHTNLV--TSSFN 291
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 450 PSTSHGYLIPNAISHEPAVMSSLS 473
P+ + G+ +P+ IS +P+V SSLS
Sbjct: 312 PADTPGFNVPSLISDDPSVSSSLS 335
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.129 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,136,983
Number of Sequences: 5004
Number of extensions: 164632
Number of successful extensions: 652
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 613
Number of HSP's gapped (non-prelim): 50
length of query: 1015
length of database: 2,362,478
effective HSP length: 80
effective length of query: 935
effective length of database: 1,962,158
effective search space: 1834617730
effective search space used: 1834617730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -