Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002300-TA|BGIBMGA002300-PA|IPR000306|Zinc finger,
FYVE-type, IPR011011|Zinc finger, FYVE/PHD-type
(1015 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489... 81 3e-15
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 76 1e-13
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 76 1e-13
07_01_1100 + 10097044-10097949,10098074-10098274,10098796-100989... 74 5e-13
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 74 7e-13
07_03_1275 + 25382959-25383765,25383850-25384050,25384693-253848... 73 2e-12
07_03_1285 + 25477542-25477625,25477776-25477832,25477973-254780... 68 4e-11
02_02_0181 + 7541831-7541971,7542407-7543279,7544101-7544301,754... 66 1e-10
03_05_0626 + 26233178-26233233,26234083-26234284,26234800-262349... 60 1e-08
05_06_0273 - 26851077-26851167,26851433-26851869,26852125-268522... 52 2e-06
01_06_0393 + 28968873-28968918,28969048-28969084,28969165-289693... 52 3e-06
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433... 51 4e-06
02_05_0336 + 28033315-28033365,28033580-28033585,28033798-280338... 51 4e-06
01_07_0288 + 42534552-42534558,42535302-42537280,42537367-425375... 51 4e-06
05_01_0048 + 331155-333077,333208-333354,333540-334087,334481-33... 50 7e-06
04_04_0927 + 29467121-29467168,29467518-29467604,29468180-294682... 50 7e-06
01_07_0198 - 41918276-41918408,41918486-41918841,41919091-419192... 50 7e-06
04_04_1657 - 35102751-35102868,35102987-35103504,35104065-351042... 48 3e-05
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 33 1.2
12_01_0789 - 7200452-7201240 31 4.7
08_02_0678 - 19971416-19971930,19971970-19973347,19974122-199745... 31 4.7
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 31 4.7
05_07_0353 + 29497953-29499110 31 4.7
01_07_0384 + 43209423-43210241 31 4.7
05_01_0603 - 5399295-5399748,5403745-5403909,5404007-5404069,540... 31 6.2
11_01_0374 - 2843405-2843508,2844134-2844239,2844327-2844409,284... 30 8.2
06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176 30 8.2
>06_03_1450 +
30246702-30247346,30248603-30248689,30248789-30248920,
30249016-30249162,30250375-30250440,30250519-30250629,
30251551-30251584,30251667-30251743,30251829-30251906
Length = 458
Score = 81.4 bits (192), Expect = 3e-15
Identities = 31/59 (52%), Positives = 36/59 (61%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEEC 996
WVPD A C C A F+AF RRHHCRNCG +FC C+ PL +PVRVC+ C
Sbjct: 337 WVPDEAVTKCTACTADFSAFNRRHHCRNCGDIFCDKCTQGRTPLTTDADAQPVRVCDRC 395
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 76.2 bits (179), Expect = 1e-13
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKP----VRVC 993
W+PD + C CDA FT RRHHCR+CG+VFCA C++NS+P + +RVC
Sbjct: 61 WMPDQSCRVCYDCDAQFTILNRRHHCRHCGRVFCARCTANSVPRAPGDAAREDGERIRVC 120
Query: 994 EECFR 998
CFR
Sbjct: 121 NYCFR 125
>07_03_0982 + 23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 76.2 bits (179), Expect = 1e-13
Identities = 32/73 (43%), Positives = 38/73 (52%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEECF 997
WVPD AA C C F+ F RRHHCRNCG++FC CS L VRVC+ C
Sbjct: 367 WVPDEAAKKCYSCAVDFSPFNRRHHCRNCGEIFCDKCSQGRTALTAEDNAPLVRVCDRCM 426
Query: 998 RSIATTCRRAQTA 1010
++ AQ A
Sbjct: 427 AEVSQRLSIAQEA 439
>07_01_1100 +
10097044-10097949,10098074-10098274,10098796-10098991,
10099697-10099881
Length = 495
Score = 74.1 bits (174), Expect = 5e-13
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 936 PEWVPDIAAPACMRCDAHFTAFRR-RHHCRNCGKVFCASCSSNSIPLP-RYGQLKPVRVC 993
PEW+PD A +CM+C A FT R RHHCR CG +FC +CS LP ++ + P RVC
Sbjct: 180 PEWLPDSYANSCMQCAASFTVVTRGRHHCRFCGGIFCRTCSKGRCLLPAKFRERNPQRVC 239
Query: 994 EECF 997
+ C+
Sbjct: 240 DACY 243
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 73.7 bits (173), Expect = 7e-13
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLP-----RYGQLKPVRV 992
W+PD + C CD FT F RRHHCR CG++FC C++NSIP + +RV
Sbjct: 33 WMPDHSCRVCYDCDTQFTIFNRRHHCRRCGRIFCGKCTTNSIPASSGPDRNIDEGDKIRV 92
Query: 993 CEECFR 998
C CF+
Sbjct: 93 CNFCFK 98
>07_03_1275 +
25382959-25383765,25383850-25384050,25384693-25384888,
25385583-25385767
Length = 462
Score = 72.5 bits (170), Expect = 2e-12
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 936 PEWVPDIAAPACMRCDAHFTAFRR-RHHCRNCGKVFCASCSSNSIPLP-RYGQLKPVRVC 993
PEW+PD + C++C FTA R RHHCR CG +FC CS +P ++ Q P RVC
Sbjct: 147 PEWLPDSSTSVCLQCSLPFTALTRGRHHCRFCGGIFCKDCSKGRCLMPMKFRQRDPQRVC 206
Query: 994 EECF 997
+ C+
Sbjct: 207 DACY 210
>07_03_1285 +
25477542-25477625,25477776-25477832,25477973-25478040,
25478187-25478391,25478429-25478586,25478865-25478940,
25479065-25479124,25479186-25479236,25479663-25479741,
25480183-25480271
Length = 308
Score = 67.7 bits (158), Expect = 4e-11
Identities = 28/51 (54%), Positives = 32/51 (62%)
Query: 947 CMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEECF 997
C C FT FRRRHHCRNCG+ C SS + LP+YG VRVC +CF
Sbjct: 15 CDVCRCTFTTFRRRHHCRNCGRTLCHEHSSYHMALPQYGIYTDVRVCYDCF 65
>02_02_0181 +
7541831-7541971,7542407-7543279,7544101-7544301,
7544358-7544595,7545732-7545922
Length = 547
Score = 66.5 bits (155), Expect = 1e-10
Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 938 WVPDIAAPACMRCDAHFTAFR-RRHHCRNCGKVFCASCS-SNSIPLPRYGQLKPVRVCEE 995
W+PD AA ACM C+ F RHHCR CG VFC CS S+ P++ +P RVC+
Sbjct: 218 WLPDSAASACMLCNVRFHPIMCSRHHCRFCGGVFCGGCSKGRSLMPPKFNTSEPQRVCDV 277
Query: 996 C 996
C
Sbjct: 278 C 278
>03_05_0626 +
26233178-26233233,26234083-26234284,26234800-26234968,
26235767-26238768
Length = 1142
Score = 59.7 bits (138), Expect = 1e-08
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEEC 996
WV D A C C F+ F R+HHC+ CG +FC++C+ + L G PVR+C+ C
Sbjct: 66 WVVD--ATHCQGCSVQFSLFTRKHHCQRCGGLFCSNCTQQRMVLRGQGD-SPVRICDPC 121
>05_06_0273 - 26851077-26851167,26851433-26851869,26852125-26852271,
26852352-26854415,26854792-26854908,26855007-26855093,
26855350-26855439,26855523-26855609,26856736-26856810
Length = 1064
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 937 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQL--KPVRVCE 994
+WV C C F R+RH+C NCG V C +CSS + KP RVC+
Sbjct: 619 KWVSGADQSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCD 678
Query: 995 ECFRSI 1000
CF +
Sbjct: 679 SCFMKL 684
>01_06_0393 + 28968873-28968918,28969048-28969084,28969165-28969384,
28969557-28969715,28969831-28969950,28972154-28972240,
28972329-28972418,28972516-28972602,28972761-28972877,
28972945-28973028,28973585-28975324,28975670-28975816,
28975998-28976431,28976523-28976667
Length = 1170
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 937 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQL--KPVRVCE 994
+WV C C F R+RH C NCG V C +CSS + KP RVC+
Sbjct: 816 KWVSGADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCD 875
Query: 995 ECFRSIATTCRRAQTANQN 1013
CF + + A+T + N
Sbjct: 876 SCFLKL----KAAETGSNN 890
>05_04_0149 - 18441561-18442082,18442723-18442861,18443295-18443352,
18443630-18443664,18444528-18444886,18445304-18445450,
18445849-18447954,18448300-18448494,18448629-18448709,
18448758-18448874,18449281-18449370,18449466-18449552,
18450293-18450315,18450675-18450804
Length = 1362
Score = 51.2 bits (117), Expect = 4e-06
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 937 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSS-NSIPLP-RYGQLKPVRVCE 994
+WV + C C F R+RH+C NC VFC +CSS S+ KP RVC+
Sbjct: 724 KWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVCD 783
Query: 995 ECFRSI 1000
C+ +
Sbjct: 784 SCYSKL 789
>02_05_0336 +
28033315-28033365,28033580-28033585,28033798-28033884,
28034741-28034830,28035736-28037778,28037916-28038062,
28038148-28038560,28038656-28038755
Length = 978
Score = 51.2 bits (117), Expect = 4e-06
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 947 CMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYG--QLKPVRVCEECF 997
C C F R++H+C NCG +FC SCS+N + + K RVC+ CF
Sbjct: 559 CSNCQLTFGFTRKKHNCYNCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACF 611
>01_07_0288 +
42534552-42534558,42535302-42537280,42537367-42537513,
42537982-42538526,42538906-42538981,42539357-42539437
Length = 944
Score = 51.2 bits (117), Expect = 4e-06
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 937 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRY--GQLKPVRVCE 994
+WV C C F R+RH+C NCG V C +C+S KP RVC+
Sbjct: 446 KWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSRKAVRAALAPNPAKPYRVCD 505
Query: 995 ECF 997
CF
Sbjct: 506 SCF 508
>05_01_0048 +
331155-333077,333208-333354,333540-334087,334481-334616
Length = 917
Score = 50.4 bits (115), Expect = 7e-06
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 937 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSS----NSIPLPRYGQLKPVRV 992
+WV C C F R+RH+C NCG V C +C+S + P G KP RV
Sbjct: 422 KWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPG--KPYRV 479
Query: 993 CEECF 997
C+ CF
Sbjct: 480 CDSCF 484
>04_04_0927 +
29467121-29467168,29467518-29467604,29468180-29468269,
29468547-29468741,29469056-29471080,29471208-29471354,
29471520-29471923,29472015-29472144
Length = 1041
Score = 50.4 bits (115), Expect = 7e-06
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 947 CMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYG--QLKPVRVCEECF 997
C C F R+ H+C NCG +FC+SC+SN I + + RVC+ CF
Sbjct: 616 CSSCQMVFGFTRKEHNCYNCGSMFCSSCTSNKITMAALAPDTNRRYRVCDACF 668
>01_07_0198 - 41918276-41918408,41918486-41918841,41919091-41919237,
41919666-41921789,41922150-41922344,41922488-41922568,
41923325-41923414,41923507-41923593,41923914-41923961
Length = 1086
Score = 50.4 bits (115), Expect = 7e-06
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 937 EWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSS-NSIPLP-RYGQLKPVRVCE 994
+WV C C F R+RH+C NC VFC SCSS S+ KP RVC+
Sbjct: 650 KWVSGSDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVCD 709
Query: 995 ECFRSI 1000
C+ +
Sbjct: 710 SCYSKL 715
>04_04_1657 - 35102751-35102868,35102987-35103504,35104065-35104211,
35104289-35106262,35106964-35107089,35107178-35107264,
35107335-35107424,35107725-35107811,35108248-35108300,
35109339-35109387
Length = 1082
Score = 48.4 bits (110), Expect = 3e-05
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 947 CMRCDAHFTAFRRRHHCRNCGKVFCASCSS----NSIPLPRYGQLKPVRVCEECFRSIAT 1002
C C F R+RH+C NCG V C SCSS + P G KP RVC+ C+ ++
Sbjct: 639 CSSCRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPG--KPYRVCDSCYLKLSK 696
Query: 1003 TCRRAQTANQNH 1014
N+N+
Sbjct: 697 VLDSGIGHNKNN 708
>02_04_0481 + 23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 33.1 bits (72), Expect = 1.2
Identities = 50/266 (18%), Positives = 110/266 (41%), Gaps = 13/266 (4%)
Query: 310 HDESSDHEKPRHSIDTASTDTFQTDYIDRSRKTSKTE-NSDLSSLRNLSTNGLMMFDPLV 368
++++S+ +K + ID + Y SR+++ T+ + L + T+ + L
Sbjct: 838 NEKNSETDKLKQDIDATYMEMENLKYEIASRESAITDLREQVEHLSSQVTHSQKL--QLD 895
Query: 369 INAAASTSNDVNRQLPDHDLVT-SLNEQVTEIADRLSSIAASDVDIVDQMHSFSTNDVTG 427
I + V L + + + +L E ++ I+ S +D + Q+ +
Sbjct: 896 IISLIDEKGKVESMLAEAKVSSGALVELISSISLPFDSPCEDPIDKIGQIAQYIKESQVT 955
Query: 428 LISVDEQAYGYSGPRNEQLSCMPST-SHGYLIPNAISHEPAVMSSLSHN------NSAVF 480
SV+ + + + Q S + S ++ + +S+ +SS+S ++A
Sbjct: 956 KSSVENELHKVNEQVTSQASQLADALSSLKVLEDELSNSKEYISSISEEKRQMQLHTAAV 1015
Query: 481 NDETSEANDPLNTDLPLIIPENIDADIVNTNICKANANLSMLLTEEFRQDESADDSTSFH 540
+E + N+ L N+ + + + +A N+S+L E+ D + TS
Sbjct: 1016 EEELEKTNEELAIYASKFEDANVTINSLQDALSQARVNISVLDAEKKEADAKHETETSAL 1075
Query: 541 SAKMTLDTED-DRVKFML-GYESEHE 564
+AK+ E+ DR L + +EH+
Sbjct: 1076 NAKLAKCLEELDRSHGNLQSHSTEHD 1101
>12_01_0789 - 7200452-7201240
Length = 262
Score = 31.1 bits (67), Expect = 4.7
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 394 EQVTEIADRLSSIAASDVDIV-DQMHSFSTNDVTGLISVDEQAYGYSGPRNEQLSCMPST 452
E+V +AD + IA +V +V D M ++ ++ V++ +SG +++
Sbjct: 141 EEVVMVADSMDDIAGEEVVVVADSMD----DEAAEVVEVEQNKKVHSGHEFDEIKI---E 193
Query: 453 SHGYLIPNAISHEPAVMSSLSHNNSAVFNDETSEANDPLNTD 494
L+P + E V + NN V +E N +++D
Sbjct: 194 MWKLLLPRYFAKEECVTTGAGDNNDEVIEEERDLHNQKVHSD 235
>08_02_0678 - 19971416-19971930,19971970-19973347,19974122-19974518,
19974533-19974645,19977436-19977903,19977935-19978059,
19978192-19978452,19984254-19984647
Length = 1216
Score = 31.1 bits (67), Expect = 4.7
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 515 ANANLSMLLTEEFRQDESADDSTSFHSAKMTLDTEDDRVKFMLGYESEHESP 566
A+ N+ +L EFR D++ D SAK+ L E + G E+ H P
Sbjct: 1164 ASVNMVFILPAEFRVDQADVDEIEEESAKLVLSPEQAVFEKPEGTENRHLKP 1215
>06_03_0099 +
16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 31.1 bits (67), Expect = 4.7
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 321 HSIDTAS---TDTFQTDYIDRSRKTSKTENSDLSSLRNLSTNG--LMMFDPLVINAAAST 375
H +DT S + T T+ +DR+R+T + ++ N+ N F ++ S
Sbjct: 835 HGLDTRSGQVSRTSATNLVDRTRETRDKSDQQITQASNIDRNDHVTSKFYESSQDSRQSL 894
Query: 376 S--NDVNRQLPDHDLVTSLNEQVTEIADRLSSIAASDVDIVDQMHSFSTNDVTGLISVDE 433
+ D R L +H++ LN Q E S ++D+DI + ST D + ++ VDE
Sbjct: 895 ARLKDAGR-LMEHNV--GLNWQQEE-----SRRVSNDMDIA-TLEMQSTEDGSSMVPVDE 945
Query: 434 QAYGYSGPRNEQLSCMPSTSHGYLIPNAISHEPAVMSSL 472
+ +EQ T+ G IP+ S V SL
Sbjct: 946 EKRPMITGSSEQ-EVRSETTAGSSIPSGSSARQPVNESL 983
>05_07_0353 + 29497953-29499110
Length = 385
Score = 31.1 bits (67), Expect = 4.7
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 251 PDIEEFVSRFYTDYAHCRDLYAQSSSEPTITDADYLPDNIEVMTPIIDGLRRLTEFADTH 310
PD++ + R A + +++ +S I L ++E M ++ + + +T
Sbjct: 226 PDLDRYKHRIVVSDAVFKSRWSEINSSDLIALDTELLRSMETMEVEME----MELYKETE 281
Query: 311 DESSDHEKPRHSIDTASTDTFQTDYIDRSRKTSKTENSDLSSLRNLS 357
+E +DH+ R ++ AS D R+R S + +S S+R++S
Sbjct: 282 EEETDHDHQRKTLLAASGGRSSVDAAARARMISSSSSS--GSVRSMS 326
>01_07_0384 + 43209423-43210241
Length = 272
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 947 CMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEEC 996
C C+++ FR H C CG+V+C C + G + R C +C
Sbjct: 107 CALCNSYIYLFR--HRCLVCGRVYCRRCVGAGM-----GDMTEGRKCIDC 149
>05_01_0603 -
5399295-5399748,5403745-5403909,5404007-5404069,
5404320-5404720,5404861-5404930,5405151-5405266
Length = 422
Score = 30.7 bits (66), Expect = 6.2
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 342 TSKTENSDLSSLRNLSTNGLMMFDPLVINAAASTSNDVNRQLPDHDLVTSLNEQVTEIAD 401
T +TEN ++RNLS G ++ LV+ S + + H LV+ V I D
Sbjct: 314 TVRTENQRAVTIRNLSQQGYSGWEKLVLQPTGGLSIEAFKSGERHKLVSDGYAIVGNIGD 373
Query: 402 RLSSI 406
+ S +
Sbjct: 374 QWSDL 378
>11_01_0374 -
2843405-2843508,2844134-2844239,2844327-2844409,
2844886-2845078,2845527-2845662,2846185-2846264,
2846348-2846932,2847058-2847126,2847203-2847347,
2847442-2847542,2848208-2849066,2849397-2849536,
2849606-2849783,2849885-2850287,2850770-2850833,
2851223-2851278,2851470-2851572
Length = 1134
Score = 30.3 bits (65), Expect = 8.2
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 17/133 (12%)
Query: 264 YAHCRDLYAQSSSEPTITDADYLPDNIEVMTPIIDGLRRLTEFADTHDESSDHEKPRHSI 323
+ H R L+A + PT+ D + D + + DGL+R + T SS H
Sbjct: 743 FPHSRYLFALA---PTVNVDDAMDDIVRQFKGVSDGLKRAVGTSPTSAPSS------HLA 793
Query: 324 DTASTDTFQTDYIDRSRKTSKTENSDLSSLRNLSTNGLMMFDP-LVINAAASTSNDVNR- 381
+ + ++ + ID N +LS +LS DP +N+A+ + N++N
Sbjct: 794 ENQMSLSWNQEEID----NHNLHNRNLSGAHSLSDGDSNYEDPSSSVNSASHSDNELNNS 849
Query: 382 QLPDHDLVTSLNE 394
Q +D+ LNE
Sbjct: 850 QYGSNDI--KLNE 860
>06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176
Length = 427
Score = 30.3 bits (65), Expect = 8.2
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 962 HCRNCGKVFCASCSSNSIPLPRYGQL-KPVRVCEECFRSIATTCRRAQTA 1010
+CR CASC + R + VRVCE C R+ A RA A
Sbjct: 78 YCRADAAYLCASCDARVHAANRVASRHERVRVCEACERAPAALACRADAA 127
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.129 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,243,804
Number of Sequences: 37544
Number of extensions: 958891
Number of successful extensions: 2551
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2516
Number of HSP's gapped (non-prelim): 29
length of query: 1015
length of database: 14,793,348
effective HSP length: 89
effective length of query: 926
effective length of database: 11,451,932
effective search space: 10604489032
effective search space used: 10604489032
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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