Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002300-TA|BGIBMGA002300-PA|IPR000306|Zinc finger,
FYVE-type, IPR011011|Zinc finger, FYVE/PHD-type
(1015 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33079| Best HMM Match : FYVE (HMM E-Value=1.1e-29) 78 3e-14
SB_6595| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 7e-14
SB_4021| Best HMM Match : FYVE (HMM E-Value=2.3e-32) 77 7e-14
SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-13
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 73 9e-13
SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18) 71 6e-12
SB_27781| Best HMM Match : Ank (HMM E-Value=0) 70 1e-11
SB_18590| Best HMM Match : FYVE (HMM E-Value=8.8e-29) 67 8e-11
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-09
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 58 3e-08
SB_24791| Best HMM Match : FYVE (HMM E-Value=7.2e-14) 58 3e-08
SB_9385| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-07
SB_22337| Best HMM Match : FYVE (HMM E-Value=1.3e-05) 53 1e-06
SB_32577| Best HMM Match : PH (HMM E-Value=7e-17) 52 3e-06
SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08) 52 3e-06
SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17) 52 3e-06
SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-04
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 43 0.001
SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.004
SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004) 41 0.006
SB_13532| Best HMM Match : FYVE (HMM E-Value=0.15) 37 0.072
SB_42436| Best HMM Match : Calx-beta (HMM E-Value=0) 36 0.13
SB_6122| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-26) 35 0.29
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.50
SB_21688| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.88
SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.2
SB_34086| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.5
SB_45939| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00051) 32 2.0
SB_34322| Best HMM Match : FeS (HMM E-Value=3.4) 32 2.0
SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23) 32 2.7
SB_14469| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.6
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.6
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 31 4.7
SB_38437| Best HMM Match : VWA (HMM E-Value=0) 31 4.7
SB_56940| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.7
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.7
SB_29507| Best HMM Match : E-MAP-115 (HMM E-Value=5.1) 31 6.2
SB_45987| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.2
SB_45123| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 6.2
SB_25316| Best HMM Match : HycH (HMM E-Value=9.1) 31 6.2
SB_24812| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.2
SB_13363| Best HMM Match : COG2 (HMM E-Value=0.081) 30 8.2
>SB_33079| Best HMM Match : FYVE (HMM E-Value=1.1e-29)
Length = 212
Score = 78.2 bits (184), Expect = 3e-14
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 938 WVPDIAAPACMRC-DAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEEC 996
WVPD A CM C FTA RRHHCR CG V C +CS+ LP KP+RVC C
Sbjct: 81 WVPDSEASTCMSCMKTKFTAINRRHHCRKCGAVVCGACSTKKFLLPAQSS-KPLRVCNSC 139
Query: 997 FRSIATTCRRA 1007
+ +++ T RA
Sbjct: 140 YNTLSNTKPRA 150
>SB_6595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 77.0 bits (181), Expect = 7e-14
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYG-QLKPVRVCEEC 996
WVP+ AC CD F+A ++HHCR CG FC +CS+N P+P G ++PVRVC+ C
Sbjct: 488 WVPNAQILACQSCDHVFSADEKKHHCRACGGGFCDNCSANKKPVPERGWGMEPVRVCDSC 547
Query: 997 FRSIATT 1003
F A+T
Sbjct: 548 FSKRAST 554
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/59 (44%), Positives = 32/59 (54%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEEC 996
WVPD C C F R+HHCR+CG+ FC CS +P G PVRVC++C
Sbjct: 628 WVPDALITNCHHCKQEFKGSDRKHHCRSCGQGFCDECSKQRRTVPSRGWDHPVRVCDKC 686
>SB_4021| Best HMM Match : FYVE (HMM E-Value=2.3e-32)
Length = 255
Score = 77.0 bits (181), Expect = 7e-14
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYG-QLKPVRVCEEC 996
WVP+ AC CD F+A ++HHCR CG FC +CS+N P+P G ++PVRVC+ C
Sbjct: 50 WVPNAQILACQSCDHVFSADEKKHHCRACGGGFCDNCSANKKPVPERGWGMEPVRVCDSC 109
Query: 997 FRSIATT 1003
F A+T
Sbjct: 110 FSKRAST 116
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/59 (44%), Positives = 32/59 (54%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEEC 996
WVPD C C F R+HHCR+CG+ FC CS +P G PVRVC++C
Sbjct: 190 WVPDALITNCHHCKQEFKGSDRKHHCRSCGQGFCDECSKQRRTVPSRGWDHPVRVCDKC 248
>SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1511
Score = 74.5 bits (175), Expect = 4e-13
Identities = 34/81 (41%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 916 EERRPTXXXXXXXXXXXXXXPEWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCS 975
EE+ T P W+ D + CM CDA FT RRRHHCR CG ++C +CS
Sbjct: 1272 EEKDSTVRDSLRDNELGTKAPAWIRDESVTMCMLCDALFTLTRRRHHCRACGGIYCNACS 1331
Query: 976 SNSIPLPRYGQLKPVRVCEEC 996
N PL Y K RVC C
Sbjct: 1332 HNKAPL-EYRDGKLCRVCRSC 1351
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 73.3 bits (172), Expect = 9e-13
Identities = 30/63 (47%), Positives = 38/63 (60%)
Query: 947 CMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEECFRSIATTCRR 1006
C C F F R+HHCRNCG+VFC CSS +P++G K VRVC+ C+ I +
Sbjct: 233 CHMCRVKFGTFIRQHHCRNCGQVFCKKCSSKESIIPQFGIEKEVRVCDPCYLKINPNSKT 292
Query: 1007 AQT 1009
AQT
Sbjct: 293 AQT 295
>SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18)
Length = 447
Score = 70.5 bits (165), Expect = 6e-12
Identities = 29/61 (47%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRV-CEEC 996
WVPD CM C FT RRRHHCR CG VFC +CSS +P+ G P + EC
Sbjct: 378 WVPDQEVKTCMACKTRFTTVRRRHHCRKCGGVFCGACSSKRVPILSLGYSAPNSIEFGEC 437
Query: 997 F 997
+
Sbjct: 438 Y 438
>SB_27781| Best HMM Match : Ank (HMM E-Value=0)
Length = 485
Score = 69.7 bits (163), Expect = 1e-11
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 946 ACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEECFRSIAT 1002
+C C F+ R+HHCR+CG++ CA CS IP+ +Y KPVRVC+ CF + +
Sbjct: 428 SCHECGMKFSIKNRKHHCRHCGRLLCAKCSCKQIPIIKYELAKPVRVCDVCFEMLTS 484
>SB_18590| Best HMM Match : FYVE (HMM E-Value=8.8e-29)
Length = 551
Score = 66.9 bits (156), Expect = 8e-11
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEECF 997
W D C CD F+ R+HHCRNCG +FC+ C+S + L KP RVCE C+
Sbjct: 352 WEEDSDVTNCNSCDKVFSITLRKHHCRNCGLIFCSDCTSKTATLA--ASKKPARVCETCY 409
Query: 998 RSIAT 1002
+ T
Sbjct: 410 HEVTT 414
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 63.3 bits (147), Expect = 1e-09
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEECF 997
W+ D C C A F+ R+HHCR CG++FC SCS+N + P ++K RVC+ C
Sbjct: 938 WISDDEVNKCTSCKAEFSFLLRKHHCRMCGRIFCHSCSNNWVRTPHSRKMK--RVCQCCL 995
Query: 998 RS 999
+
Sbjct: 996 EN 997
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 58.4 bits (135), Expect = 3e-08
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIP 980
W+PD C C F FRRRHHCR CG++FC C + +P
Sbjct: 127 WMPDETCKECYECGEKFNTFRRRHHCRLCGQIFCYRCCNVEVP 169
>SB_24791| Best HMM Match : FYVE (HMM E-Value=7.2e-14)
Length = 64
Score = 58.4 bits (135), Expect = 3e-08
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIP 980
W+PD C C F FRRRHHCR CG++FC C + +P
Sbjct: 14 WMPDETCKECYECGEKFNTFRRRHHCRLCGQIFCYRCCNVEVP 56
>SB_9385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 53.6 bits (123), Expect = 8e-07
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 936 PEWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASC 974
P W+ D A C C FT RR+HHCR CG+V C C
Sbjct: 37 PRWMSDDEAHVCPLCSQKFTQIRRKHHCRQCGRVLCNKC 75
>SB_22337| Best HMM Match : FYVE (HMM E-Value=1.3e-05)
Length = 47
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 957 FRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEECFRSI 1000
F RRHHCR CG+V C+ CS +S + YG+ VRVC C+ I
Sbjct: 1 FNRRHHCRRCGRVVCSVCSPHSCVVHGYGKAL-VRVCSTCYERI 43
>SB_32577| Best HMM Match : PH (HMM E-Value=7e-17)
Length = 1248
Score = 51.6 bits (118), Expect = 3e-06
Identities = 19/34 (55%), Positives = 20/34 (58%)
Query: 936 PEWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKV 969
P W+PD CM C FT RRHHCR CGKV
Sbjct: 1133 PVWIPDARVTMCMLCTDDFTVTNRRHHCRGCGKV 1166
>SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08)
Length = 910
Score = 51.6 bits (118), Expect = 3e-06
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 936 PEWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKV 969
P WVPD A CM C F+ RR+HHCR CGKV
Sbjct: 524 PIWVPDEVALFCMNCGLKFSLIRRKHHCRACGKV 557
>SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17)
Length = 289
Score = 51.6 bits (118), Expect = 3e-06
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 959 RRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEECFRSI 1000
R+HHCR CG+ C SCS LP G +R+C EC+ +I
Sbjct: 198 RQHHCRKCGRAVCQSCSEKQSTLPIMGFEYSIRICNECYGTI 239
>SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 44.8 bits (101), Expect = 4e-04
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEECF 997
W A C C + ++HC +CGK+FC C S + +P +VC+ C+
Sbjct: 278 WEHKDDARECRNCQKPLNTNKDKYHCHHCGKIFCEGCRSKT--FSNSSTRRPHQVCDACY 335
Query: 998 RSI 1000
++
Sbjct: 336 ATL 338
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 42.7 bits (96), Expect = 0.001
Identities = 64/290 (22%), Positives = 113/290 (38%), Gaps = 18/290 (6%)
Query: 309 THDES-SDHEKPRHS-IDTASTDTFQTDYIDRSRKTSKTENSDLSSLRNLSTNGLMMFDP 366
T D S SD+ +S D ++TD +D +S NSD S+ N ++N +
Sbjct: 64 TSDNSTSDNSNSDNSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNPENS 123
Query: 367 LVINAAASTSNDVNR----QLPDHDLVTSLNEQVTEIADRLSSIAASDVDIVDQMHSFST 422
N+ ++ SN N PD+ + N + + S + SD D + S ++
Sbjct: 124 TSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSNPDNLTSDNS 183
Query: 423 N-DVTGLISVDEQAYGYSGPRNEQLSCMPSTSHGYLIPNAISHEPAVMSSLSHN----NS 477
N D +G + + ++ + S S N+ S +S + N NS
Sbjct: 184 NTDNSGSDNSSSGNFNSDNSTSDNSTSDNSNSDNSTSDNSTSDNSNSDNSYTDNSTSDNS 243
Query: 478 AVFNDETSEANDPLNTDLPLIIPENIDADIVNTNICKANANLSMLLTEEFRQDES-ADDS 536
N + +N ++ P+N ++D NT+ N+N ++ D S D+S
Sbjct: 244 KKDNSNPNNSNTDNSSSADNSNPDNSNSDNSNTD----NSNSDNSSSDNSNSDNSNTDNS 299
Query: 537 TSFHS--AKMTLDTEDDRVKFMLGYESEHESPVDSGVSTENTSLDRSPDS 584
TS +S T D + S+ P +S + N+ S +S
Sbjct: 300 TSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNSDNS 349
Score = 33.1 bits (72), Expect = 1.2
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 5/172 (2%)
Query: 460 NAISHEPAVMSSLSHN-NSAVFNDETSEAND--PLNTDLPLIIPENIDADIVNT-NICKA 515
N+ S+ +S S N NS N + S ++D P N++ +N + D N+ N
Sbjct: 112 NSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSD 171
Query: 516 NANLSMLLTEEFRQDESADDSTSFHSAKMTLDTEDDRVKFMLGYESEHESPVDSGVSTEN 575
N+N L ++ D S D++S + T D+ ++ S S +
Sbjct: 172 NSNPDNLTSDNSNTDNSGSDNSSSGNFNSDNSTSDNSTSDNSNSDNSTSDNSTSDNSNSD 231
Query: 576 TSLDRSPDSDQSKEIKGSLQNRVLIPEESSFDTVNINYAEEEGQKNEACSSN 627
S + SD SK+ S N SS D N + + + + +S+
Sbjct: 232 NSYTDNSTSDNSKK-DNSNPNNSNTDNSSSADNSNPDNSNSDNSNTDNSNSD 282
>SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 41.1 bits (92), Expect = 0.004
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 528 RQDESADDSTSFH----SAKMTLDTEDDRVKFMLGYESEHESPVDSGVSTENTSLDRSPD 583
R+D + DD T S + +L T +D K G +S E+P GV NT+ + D
Sbjct: 139 RKDTNDDDETKHEDFNASEEHSLKTNNDDSKDKTGRKSNQEAPASQGVLKNNTTANEG-D 197
Query: 584 SDQSKEI--KGSLQNRVLIPEESSFDTVNINYAEEEGQKNEACSSNIDVR 631
+ S ++ +G++ L ++ S T+ N + N + N DV+
Sbjct: 198 INASGDLNGEGNINKANLTEQDESTSTIKANEENTQTNSNPTSADNNDVQ 247
>SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004)
Length = 610
Score = 40.7 bits (91), Expect = 0.006
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 940 PDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSI 979
P+ C C +FT F+R+ CR C K C++C + +
Sbjct: 59 PEFTEMVCYLCSVNFTLFKRKSTCRGCKKTLCSNCFTQGL 98
>SB_13532| Best HMM Match : FYVE (HMM E-Value=0.15)
Length = 65
Score = 37.1 bits (82), Expect = 0.072
Identities = 14/27 (51%), Positives = 15/27 (55%)
Query: 938 WVPDIAAPACMRCDAHFTAFRRRHHCR 964
WVPD AA C C F R+HHCR
Sbjct: 39 WVPDHAATNCANCHTGFWIANRKHHCR 65
>SB_42436| Best HMM Match : Calx-beta (HMM E-Value=0)
Length = 439
Score = 36.3 bits (80), Expect = 0.13
Identities = 54/264 (20%), Positives = 115/264 (43%), Gaps = 16/264 (6%)
Query: 343 SKTENSDLSSLRNLSTNGLMMFDPLVINAAASTSND--VNRQLPDHDLVTSLNEQVTEIA 400
+KT SD+S LSTN F P+ A + S N Q ++ ++++ V
Sbjct: 138 TKTGTSDISLDVKLSTNNGTAFSPVDYTAMSDNSVTFLANEQSKLVNITINVDQTVENDE 197
Query: 401 DRLSSIAASDVDIVDQMHSFSTNDVTGLISVDEQAYGYSGPRNEQLSCMPSTSHGYLIPN 460
D + ++ ++ D V + +T +T + + D+ AY + C+ +++ N
Sbjct: 198 DFKALLSHTNADQV-ALGLLNTTTIT-IGNDDQVAYCMVFNNHSFALCLRLSTN-----N 250
Query: 461 AISHEPAVMSSLSHNN-SAVFNDETSEANDPLNTDLPLIIPENIDADIVNTNICKANANL 519
+ P +++S N+ + + N+++ N +N D + E+ A + +TN + L
Sbjct: 251 GTAFSPVDYTAMSDNSVTFLANEQSKLVNITINVDQTVENDEDFKALLSHTNADQVALGL 310
Query: 520 SMLLTEEFRQDESADDSTSFHSAKMTLDTEDDRVKFMLGYESEHESPVDSGVSTEN---- 575
T D+ A + SF S+ +++ + V + + +D +ST N
Sbjct: 311 LNTTTITIGNDDQA--TFSFASSSYSVEEDTGYVTVNITKTGTSDISLDVKLSTNNGTAF 368
Query: 576 TSLDRSPDSDQSKEIKGSLQNRVL 599
+ +D + SD S + Q++++
Sbjct: 369 SPVDYTAMSDNSVTFLANEQSKLV 392
Score = 30.3 bits (65), Expect = 8.2
Identities = 40/186 (21%), Positives = 82/186 (44%), Gaps = 16/186 (8%)
Query: 419 SFSTNDVTGLISVDEQAYGYSGPRNEQLSCMPSTSHGYLIPNAISHEPAVMSSLSHNN-S 477
S+S + TG ++V+ G S N L ST++G + P +++S N+ +
Sbjct: 9 SYSVEEDTGYVTVNITKTGTS---NIHLDVKLSTNNG------TAFSPVDYTAMSDNSVT 59
Query: 478 AVFNDETSEANDPLNTDLPLIIPENIDADIVNTNICKANANLSMLLTEEFRQDESADDST 537
+ N+++ N +N D + E+ A + +TN + L T D+ A +
Sbjct: 60 FLANEQSKLVNITINVDQTVENDEDFKALLSHTNADQVALGLLNTTTITIGNDDQA--TF 117
Query: 538 SFHSAKMTLDTEDDRVKFMLGYESEHESPVDSGVSTEN----TSLDRSPDSDQSKEIKGS 593
SF S+ +++ + V + + +D +ST N + +D + SD S +
Sbjct: 118 SFASSSYSVEEDTGYVTVNITKTGTSDISLDVKLSTNNGTAFSPVDYTAMSDNSVTFLAN 177
Query: 594 LQNRVL 599
Q++++
Sbjct: 178 EQSKLV 183
>SB_6122| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-26)
Length = 363
Score = 35.1 bits (77), Expect = 0.29
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 106 ELCYVSAMVNVKTPQEFEAQQLICVLFSESLRRALKQNL 144
E Y+ V V T F LIC +F+E LR+ALKQ L
Sbjct: 288 EYVYIHNTVVVMTYASFVINPLICFMFTEGLRKALKQML 326
>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1888
Score = 34.3 bits (75), Expect = 0.50
Identities = 49/240 (20%), Positives = 91/240 (37%), Gaps = 10/240 (4%)
Query: 274 SSSEPTITDADYLPDNIEVMTPIIDGLRRLTEFAD-THDESSDHEKPRHSIDTASTDTFQ 332
+S T +D D DN + T D T D + + S + ++D
Sbjct: 144 TSDNDTTSDNDTTSDNETTSDNDTNSDNDTTSDNDKTTDNDTTTDNDTTSDNDTTSDNNT 203
Query: 333 TDYIDRSRKTSKTENSDLSSLRNLSTNGLMMFD-PLVINAAASTSNDVNRQLPDHDLVTS 391
T Y D + +KT N++ +S + +++ FD + +T ND D+D T
Sbjct: 204 TSYNDTTSDNNKTSNNNTTSDNDTTSDNDTTFDNDTTTDNNKTTDNDTT---SDNDTTTD 260
Query: 392 LNEQVTEIADRLSSIAASDVDIVDQMHSFSTNDVTGLISVDEQAYGYSGPRNEQLSCMPS 451
N+ ++ ++ SD D + S ND T D + N+ S +
Sbjct: 261 -NDTTSDNDTTTNNDTNSDNDTTTSNDTTSDNDTTS--DNDTTTNNDTTSDNDATSDNDT 317
Query: 452 TSHGYLIPNAISHEPAVMSSLSHNNSAVFNDETSEANDPLNTDLPLIIPENIDADIVNTN 511
T++ + + + + S N++ ND TS+ + + D N D + + N
Sbjct: 318 TTNNDTTSD--NDATSDNDTTSDNDTTTNNDATSDNDTTTDNDTTTDNETNTDNESASDN 375
>SB_21688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1078
Score = 33.5 bits (73), Expect = 0.88
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 558 GYESEHESPVDSGVSTENTSLDRSPDSDQSKEIKGSLQNRVLIPEESSFDTVNINYAEEE 617
G S+H + +D GV+ T L + KE+ SL ++I E++F V + + +E+
Sbjct: 450 GDRSDHANQIDFGVAMTLTQLGQDGSPLVRKELVVSLHG-LVIQFETNFGVVALQFLDED 508
Query: 618 GQKNEA 623
QK A
Sbjct: 509 RQKENA 514
>SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 33.1 bits (72), Expect = 1.2
Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 509 NTNICKANANLSMLLTEEFRQDESADDSTSFHSAKMTLDTEDDRVKFMLGYESEHESPVD 568
N N+ +A+ + + +T ++ + K T+D + D L E E E +D
Sbjct: 3 NDNLSEADCGVQISITNASASEDELESDRPRADEKRTIDPDSDE---ELEREIEKELDID 59
Query: 569 SGVSTENTSLDRSPDSDQSKEIKGSLQNRVLIPE--------ESSFDTVNINYAEEEGQK 620
+N + + + +EI S N V + E E++ ++ N N E++G
Sbjct: 60 EN-GDDNVDQETAAQQKEDEEIATSFSNGVSLEEQGGTENGAENNIESSNANDGEQDGGD 118
Query: 621 NEA 623
N +
Sbjct: 119 NNS 121
>SB_34086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 890
Score = 32.7 bits (71), Expect = 1.5
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 268 RDLYAQSSSEPTITDADYLPDNIEVMTPIIDGLRRLTEFADTHDESSDHEKPRHSIDTAS 327
RD Y+ + P++ DY+ D+ EV + LTE D +E + E+ +
Sbjct: 721 RDDYSATPVVPSLGQGDYIDDSPEVQCRV----PALTELEDVAEEEDEEEEEEEEEVAGA 776
Query: 328 TDTFQTDYIDRSRKTSK 344
DY D + SK
Sbjct: 777 RSLSPPDYYDENSSESK 793
>SB_45939| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00051)
Length = 575
Score = 32.3 bits (70), Expect = 2.0
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 433 EQAYGYSGPRNEQLSCMPSTSHGYLIPNAISH--EPAVMSSLSHNNSA---VFNDETSEA 487
++A Y G + + P + P + H E +VM + ++A D T++A
Sbjct: 477 DEALSYIGSSSRECVLFPDQALNEPAPAPVGHSMESSVMEHVLTQHTAEHSYIRDNTTDA 536
Query: 488 NDPLNTDLPLIIPENIDADIVNTN 511
+ L+TD+PLI+ D ++ +
Sbjct: 537 REQLHTDVPLILFSKGDIQVLRAH 560
>SB_34322| Best HMM Match : FeS (HMM E-Value=3.4)
Length = 554
Score = 32.3 bits (70), Expect = 2.0
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 6/116 (5%)
Query: 298 DGLRRLTEFADTHDESSDHEKPRHSIDTASTDTFQTDYIDR-SRKTSKTENSDLSSLRNL 356
D ++ E D H K S + STD + D ID S + T+ + N+
Sbjct: 343 DSVKNAMELFDNHSFCRIARKESFSHNNGSTDNDKNDKIDTDSGEDDLTDKDSNLDVINI 402
Query: 357 STNGLMMFDPLVIN-AAASTSNDVNRQLPDHDLVTSLNEQVTEIADRLSSIAASDV 411
++ DP N A + +D N + D + ++ +E VT I AA D+
Sbjct: 403 GSHS----DPQEANTATCACGHDNNDVMDDTNSHSNHDEDVTNIVTNTKPSAAGDI 454
>SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23)
Length = 553
Score = 31.9 bits (69), Expect = 2.7
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 17/232 (7%)
Query: 308 DTHDESSDHEKPRHSIDTASTDTFQTDYIDRSRKTSKTENSDLSSLRNLSTNGLMMFD-P 366
D + +D++ + D + D + Y + + +NS + +++ N + D
Sbjct: 307 DNDNSINDNDNSINDNDNSINDNDNSIYDNDNSSIYDNDNSIYDNDNSINDNDNSINDND 366
Query: 367 LVINAAASTSNDVNRQLPDHDLVTSLNEQVTEIADRLSSIAASDVDIVDQMHSFSTNDVT 426
IN ++ ND + + D+D S+N+ I D +SI +D I D +S + ND
Sbjct: 367 NSINDNDNSINDNDNSINDND--NSINDNDNSINDNDNSINDNDNSINDNDNSINDND-N 423
Query: 427 GLISVDEQAYGYSGPRNEQLSCMPSTSHGYLIPNAISHEPAVMSSLSHNNSAVFNDETSE 486
+ D Y S N+ S + N+I+ +S++ N++++ ND +
Sbjct: 424 SINDNDNSIYDSSIYDNDNSIYDNSINDN---DNSINDND---NSINDNDNSI-NDNDNS 476
Query: 487 ANDPLNTDLPLIIPENIDADIVNTNICKANANLSMLLTEEFRQDESADDSTS 538
ND N+ I +N ++ N N N N S+ + D S +D+ S
Sbjct: 477 INDNDNS-----INDNDNSINDNDNSINDNDN-SINDNDNSINDSSINDNDS 522
>SB_14469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 943 AAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEECFRSIA 1001
A P+ ++ + ++ H C CGK F A SS L + + KP + C+EC + A
Sbjct: 179 ALPSNLKAHLKIHSGQKPHKCDECGKCF-AQSSSLKTHLITHSEQKPHK-CDECGKCFA 235
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 514 KANANLSMLLTEEFRQDESADDSTSFHSAKMTLDTE-DDRVKFMLGYESEHESPVDSGVS 572
+ANA + EE R + D S + DT DD K E ++ D
Sbjct: 239 EANAQTKEVEEEEVRSNRGNLDEQSTEANGNNTDTHSDDSEKDSDDDEKSADTKNDEISD 298
Query: 573 TENTSLDRSPDSDQSKEIKGSLQNRVLIPEESSFD 607
++ + ++ DSD + G+ ++ L EES D
Sbjct: 299 SDKSDTEKDADSDSENDGSGTSESEYLSSEESDED 333
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 559 YESEHESPVDSGVSTENTSLDRSPDSDQSKEIKGSLQNRVLIPEESSFDTVNINYAEEEG 618
+ S ESP D G + + L+ S D+ S+ L+N + SF T + A
Sbjct: 372 FSSPKESPADKGGADDKAVLETSQDTRLSRFSPNPLENSESSKDSESFKTSDEGSAHPSK 431
Query: 619 QKNEACSSN 627
+ E S +
Sbjct: 432 ESKETASED 440
>SB_38437| Best HMM Match : VWA (HMM E-Value=0)
Length = 3445
Score = 31.1 bits (67), Expect = 4.7
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 308 DTHDESSDHEKPRHSIDTASTDTFQTDYIDRSRKTSKTENS-DLSSLRNLSTNGLMMFDP 366
D +D +H+ P H I +++ + D +D + T +S + N NG+ + D
Sbjct: 319 DINDIPPEHKIPSHGIHVNASEESENDLVDSEMLSEPTHSSFHHETPINEEVNGIPLNDE 378
Query: 367 LVINAAASTSND 378
+ N A ST++D
Sbjct: 379 M--NPATSTTDD 388
>SB_56940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1981
Score = 31.1 bits (67), Expect = 4.7
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
Query: 488 NDPLNTDLPLIIPENIDADIVNTNICKANANLSMLLTEEFRQDESADDSTSFHSAKMTLD 547
ND N D P+ P + +DI ++ + N + LT++ D+S DD+T+ S + +
Sbjct: 572 NDLDNQDSPVCNPHHA-SDIQDSRV---NEQRNATLTDQSGDDQSDDDTTTCISMSLDVP 627
Query: 548 TEDDRVKFMLGYESEHESPVDSGVSTENTSLDRSPDSDQSKE-IKGSLQNRVLIPEESSF 606
ED + ++ E + G + S +D S IK +L
Sbjct: 628 LEDVVRARGVCNDNPGEKKISIGKTRTTMQESHSDVTDISLSLIKADYMETLLGANTVMN 687
Query: 607 DTVNINY--AEEEGQKNEACSSNIDVR 631
T NY +EE G+ +E + D+R
Sbjct: 688 RTPTSNYSNSEETGKLHEKGLESNDIR 714
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 31.1 bits (67), Expect = 4.7
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 274 SSSEPTITDADYLPDNIEVMTPIIDGLRRLTEFADTHDESSDH-----EKPRHSIDTAST 328
++ EP D L + EV+ I + R DT +E S E + +++ +
Sbjct: 3323 AAMEPITPDTMALDNRAEVLEDIRKDIDRQKATRDTTEEKSKALIGVTEADKDVVESEAC 3382
Query: 329 DTFQT-DYIDRSRKTSKTENSDLSSLRNLSTNGLMMFDPL------VINAAASTSNDVNR 381
D + D ++ + + SD+ +GL L V+ + S DVN+
Sbjct: 3383 DAVERYDKLNAKCALEEQQTSDVKEAFAKYADGLEPLRALLDKAEPVLGSLEPVSGDVNK 3442
Query: 382 QLPDHDLVTSLNEQVTEIADRLSSIAASDVDIVDQMHSFSTNDVT 426
+ + V L E++ D+L+S+ ++ + D + S S + T
Sbjct: 3443 NKEELENVKKLKEELEGAKDKLNSLNDAERVLEDALTSVSGDPST 3487
>SB_29507| Best HMM Match : E-MAP-115 (HMM E-Value=5.1)
Length = 198
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 308 DTHDESSDHEKPRHSIDTASTDTFQTDYID-RSRKTSKTENSDLSSLRNLSTNGLMMFDP 366
DTHD S ++ H ID D + D+ D RSR +S+ + S R+ G +
Sbjct: 64 DTHDRDSTRDEDTHEIDI--PDGRERDHEDNRSRASSRASSRASSRERDARNRGRYKIER 121
Query: 367 LVINAAASTSND 378
A+S S D
Sbjct: 122 DARKRASSDSED 133
>SB_45987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 30.7 bits (66), Expect = 6.2
Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 3/122 (2%)
Query: 377 NDVNRQLPDHDLVTSLNEQVTEIADRLSSIAASDVDIVDQMHSFSTNDVTGLISVDEQAY 436
ND +++ + D E I + + + M + D+ L D++
Sbjct: 995 NDDDKEKEEEDRAEECEETEAHIISMQEEVNDDETEEEADMKGYD-EDIVDLQPQDKEED 1053
Query: 437 GYSGPRNEQLSCMPSTSHGYLIPNAISHEPAVMSSLSHNNSAVFNDETSEANDPLNTDLP 496
G E+L + + H + H+P +SHN S V +DET E D D
Sbjct: 1054 GEV--IEEKLDDLQTQCHINTGSHEAIHQPPPEQPVSHNQSEVNDDETEEEADMKGYDED 1111
Query: 497 LI 498
++
Sbjct: 1112 IV 1113
>SB_45123| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 336
Score = 30.7 bits (66), Expect = 6.2
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 961 HHCRNCGKVFCASCS-SNSIPLPRYGQLKP--VRVCEECFRSIATTCR 1005
H C CGK+F + S + +P + + +P +C + FR +T CR
Sbjct: 166 HRCDQCGKIFKTKYTLSIHLKMPDHTESRPFVCNICGKGFRLSSTLCR 213
>SB_25316| Best HMM Match : HycH (HMM E-Value=9.1)
Length = 228
Score = 30.7 bits (66), Expect = 6.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 399 IADRLSSIAASDVDIVDQMHSFSTNDVTGLISVDEQAY 436
I DR+ S+ SD ++D+MHS + +D + VD + Y
Sbjct: 153 IIDRVHSLTDSDNAMIDRMHSHTDSDNAIINLVDSEVY 190
>SB_24812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 30.3 bits (65), Expect = 8.2
Identities = 40/181 (22%), Positives = 69/181 (38%), Gaps = 8/181 (4%)
Query: 418 HSFSTNDVTGLISVDEQAYGYSGPRNEQLSCMPSTSHGYLIPNAISHEPAVMSSLSHNNS 477
H ST V G S+ + Y S N+ L S S GY + + +
Sbjct: 191 HRESTESVHG--SIKDSGYADS---NQDLLSQDSGSEGYSEVCRVFFGEKSGILRARKLT 245
Query: 478 AVFNDETSEANDPLNTDLPLIIPE-NIDADIVNTNICKANANLSMLLTEEFRQDESADDS 536
FNDE +E + I + D + + K + + EEF+ A+ S
Sbjct: 246 RTFNDERAELEAYYKEQIKSIRSQYEKDQKDWDERLVKERVEIRGRVEEEFQAKMRAELS 305
Query: 537 TSFHSAKMTL-DTEDDRVKFMLGYESEHESPVDS-GVSTENTSLDRSPDSDQSKEIKGSL 594
S H AK T+ D E+ + E +H ++ + + + + + + +E KG +
Sbjct: 306 DSKHHAKRTISDMEEKHTRERSEIEKKHRVELEEIDIRMQKLTSEVQTLTREKEEWKGQV 365
Query: 595 Q 595
Q
Sbjct: 366 Q 366
>SB_13363| Best HMM Match : COG2 (HMM E-Value=0.081)
Length = 411
Score = 30.3 bits (65), Expect = 8.2
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Query: 308 DTHDESSDHEKPRHSIDTASTDTFQTDYIDRSRKTSKTENSDLSSLRNLSTNGLMMFDPL 367
DT D + R S DT +DT +D D + S T +SD + L L++ +
Sbjct: 170 DTRDSDTRDSDTRDS-DTRDSDTRDSDTRDSDTRDSDTRDSDTRDM-TLVIVTLVIVTLM 227
Query: 368 VINAAASTSNDVNRQLPDHDLVTSLNEQVTEIADRLSSI 406
++ V R++P H + N +I R++SI
Sbjct: 228 IVTLMRKFEKKV-RKIPAHQKLLPKNTSEAKIT-RIASI 264
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.129 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,703,599
Number of Sequences: 59808
Number of extensions: 1146527
Number of successful extensions: 3518
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3445
Number of HSP's gapped (non-prelim): 77
length of query: 1015
length of database: 16,821,457
effective HSP length: 89
effective length of query: 926
effective length of database: 11,498,545
effective search space: 10647652670
effective search space used: 10647652670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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