GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002299-TA|BGIBMGA002299-PA|undefined
         (98 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4076|AAF56673.2|  980|Drosophila melanogaster CG6051-PA...    67   3e-12
AY069257-1|AAL39402.1|  173|Drosophila melanogaster GM03763p pro...    29   1.2  
AL031024-3|CAA19832.1|  308|Drosophila melanogaster EG:196F3.2 p...    29   1.2  
AE014298-230|AAF45642.1|  211|Drosophila melanogaster CG32810-PB...    29   1.2  
BT003237-1|AAO24993.1|  254|Drosophila melanogaster LP05301p pro...    27   5.0  
AE014297-3425|AAS65202.1|  909|Drosophila melanogaster CG31140-P...    27   5.0  
AE014297-3424|AAS65201.1| 1055|Drosophila melanogaster CG31140-P...    27   5.0  
AE014297-3423|AAF56214.2| 1564|Drosophila melanogaster CG31140-P...    27   5.0  

>AE014297-4076|AAF56673.2|  980|Drosophila melanogaster CG6051-PA
          protein.
          Length = 980

 Score = 67.3 bits (157), Expect = 3e-12
 Identities = 31/49 (63%), Positives = 39/49 (79%)

Query: 35 ESRDDHSLLAQFFFADDALNMVAAELDSFDGRKDPDRCSTLVNQLRHAQ 83
          +S DD SLLA+FF AD +L  VA+ELDSFDGR +PDRC+ LV++LR  Q
Sbjct: 2  QSADDKSLLARFFHADRSLTAVASELDSFDGRAEPDRCTRLVSRLRQNQ 50


>AY069257-1|AAL39402.1|  173|Drosophila melanogaster GM03763p
          protein.
          Length = 173

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 26 VGGAKYCTTE---SRDDHSLLAQFFFADDALNMVAAELDSFDGRKDPDRCSTLVNQLRHA 82
          VGG  + TT+   SRD +S L++    D  L     E  ++   +DP   + ++N LRH 
Sbjct: 28 VGGTYFLTTKTTLSRDPNSFLSRLIQEDCDLISDRDETGAYLIDRDPKYFAPVLNYLRHG 87

Query: 83 QV 84
          ++
Sbjct: 88 KL 89


>AL031024-3|CAA19832.1|  308|Drosophila melanogaster EG:196F3.2
          protein.
          Length = 308

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 26 VGGAKYCTTE---SRDDHSLLAQFFFADDALNMVAAELDSFDGRKDPDRCSTLVNQLRHA 82
          VGG  + TT+   SRD +S L++    D  L     E  ++   +DP   + ++N LRH 
Sbjct: 28 VGGTYFLTTKTTLSRDPNSFLSRLIQEDCDLISDRDETGAYLIDRDPKYFAPVLNYLRHG 87

Query: 83 QV 84
          ++
Sbjct: 88 KL 89


>AE014298-230|AAF45642.1|  211|Drosophila melanogaster CG32810-PB
          protein.
          Length = 211

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 26 VGGAKYCTTE---SRDDHSLLAQFFFADDALNMVAAELDSFDGRKDPDRCSTLVNQLRHA 82
          VGG  + TT+   SRD +S L++    D  L     E  ++   +DP   + ++N LRH 
Sbjct: 28 VGGTYFLTTKTTLSRDPNSFLSRLIQEDCDLISDRDETGAYLIDRDPKYFAPVLNYLRHG 87

Query: 83 QV 84
          ++
Sbjct: 88 KL 89


>BT003237-1|AAO24993.1|  254|Drosophila melanogaster LP05301p
           protein.
          Length = 254

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 3   KQTCSTHECLADVRIELTTLGTTVGGAKYCTTE 35
           K+TC + ECL   R E   + T  G   Y  TE
Sbjct: 152 KKTCWSSECLTGYRCEWCGMTTHAGCRMYLPTE 184


>AE014297-3425|AAS65202.1|  909|Drosophila melanogaster CG31140-PC,
           isoform C protein.
          Length = 909

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 3   KQTCSTHECLADVRIELTTLGTTVGGAKYCTTE 35
           K+TC + ECL   R E   + T  G   Y  TE
Sbjct: 152 KKTCWSSECLTGYRCEWCGMTTHAGCRMYLPTE 184


>AE014297-3424|AAS65201.1| 1055|Drosophila melanogaster CG31140-PB,
           isoform B protein.
          Length = 1055

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 3   KQTCSTHECLADVRIELTTLGTTVGGAKYCTTE 35
           K+TC + ECL   R E   + T  G   Y  TE
Sbjct: 152 KKTCWSSECLTGYRCEWCGMTTHAGCRMYLPTE 184


>AE014297-3423|AAF56214.2| 1564|Drosophila melanogaster CG31140-PA,
           isoform A protein.
          Length = 1564

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 3   KQTCSTHECLADVRIELTTLGTTVGGAKYCTTE 35
           K+TC + ECL   R E   + T  G   Y  TE
Sbjct: 152 KKTCWSSECLTGYRCEWCGMTTHAGCRMYLPTE 184


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.136    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,666,881
Number of Sequences: 52641
Number of extensions: 153911
Number of successful extensions: 348
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 340
Number of HSP's gapped (non-prelim): 8
length of query: 98
length of database: 24,830,863
effective HSP length: 73
effective length of query: 25
effective length of database: 20,988,070
effective search space: 524701750
effective search space used: 524701750
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 54 (25.8 bits)