Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002299-TA|BGIBMGA002299-PA|undefined
(98 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 68 1e-12
AF000196-3|AAL11097.1| 199|Caenorhabditis elegans Hypothetical ... 29 0.40
AF047651-5|AAC02722.2| 702|Caenorhabditis elegans Germline-enha... 27 1.6
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 25 6.5
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 25 6.5
AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying de... 25 6.5
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 25 6.5
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 25 6.5
U41276-4|AAA82468.1| 272|Caenorhabditis elegans Temporarily ass... 25 8.6
AC199172-11|ABO33270.1| 311|Caenorhabditis elegans F-box a prot... 25 8.6
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 67.7 bits (158), Expect = 1e-12
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 38 DDHSLLAQFFFADDALNMVAAELDSFDGRKDPDRCSTLVNQLRHAQ 83
DD LA+F++AD ALN +A+ELDSFDGR+DPDRC+ LV +LR AQ
Sbjct: 14 DDWMPLARFYYADSALNDIASELDSFDGRRDPDRCNALVTRLRVAQ 59
>AF000196-3|AAL11097.1| 199|Caenorhabditis elegans Hypothetical
protein B0041.8 protein.
Length = 199
Score = 29.5 bits (63), Expect = 0.40
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 6 CSTHECLADVRIELTTLGTTVGGAKYCTTESRDDHSLLAQFFFADDALNMVAAELDSFD 64
C CLA V++ +GT +G K + + ++ LA+++ N ELDSFD
Sbjct: 111 CMRSNCLASVKLTDLPVGTVIG--KEISLTPKSAYNTLARYY----PKNRYTPELDSFD 163
>AF047651-5|AAC02722.2| 702|Caenorhabditis elegans
Germline-enhanced at-hook proteinprotein 1 protein.
Length = 702
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 16 RIELTTLGTTVGGAKYCTTESRDDHSLLAQFFFADDA 52
R ELT+L ++ G K+C R H +L QF+ + A
Sbjct: 482 RNELTSLKSSFGSEKFCGQTMRAPH-VLTQFYSVNQA 517
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase
C beta protein.
Length = 1418
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 63 FDGRKDPDRCSTLVNQLRHAQVGFYFCIFIQGKD 96
FD D C L Q+R + GF+ I+GKD
Sbjct: 23 FDRYDDESTCLELNAQVRIDENGFFLRWLIEGKD 56
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase
C beta homolog EGL-8 protein.
Length = 1431
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 63 FDGRKDPDRCSTLVNQLRHAQVGFYFCIFIQGKD 96
FD D C L Q+R + GF+ I+GKD
Sbjct: 23 FDRYDDESTCLELNAQVRIDENGFFLRWLIEGKD 56
>AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying
defective protein 8,isoform c protein.
Length = 592
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 63 FDGRKDPDRCSTLVNQLRHAQVGFYFCIFIQGKD 96
FD D C L Q+R + GF+ I+GKD
Sbjct: 23 FDRYDDESTCLELNAQVRIDENGFFLRWLIEGKD 56
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 63 FDGRKDPDRCSTLVNQLRHAQVGFYFCIFIQGKD 96
FD D C L Q+R + GF+ I+GKD
Sbjct: 23 FDRYDDESTCLELNAQVRIDENGFFLRWLIEGKD 56
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 63 FDGRKDPDRCSTLVNQLRHAQVGFYFCIFIQGKD 96
FD D C L Q+R + GF+ I+GKD
Sbjct: 23 FDRYDDESTCLELNAQVRIDENGFFLRWLIEGKD 56
>U41276-4|AAA82468.1| 272|Caenorhabditis elegans Temporarily
assigned gene nameprotein 303 protein.
Length = 272
Score = 25.0 bits (52), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 26 VGGAKYCTTES---RDDHSLLAQFFFADDALNMVAAELDSFDGRKDPDRCSTLVNQLRHA 82
VGG + TT S R+ S L + + L E ++ +DPD S ++N LRH
Sbjct: 88 VGGKVFQTTRSTLMREPCSFLYRLCQDEMGLPTDRDETGAYLIDRDPDFFSPILNYLRHG 147
Query: 83 QV 84
++
Sbjct: 148 KL 149
>AC199172-11|ABO33270.1| 311|Caenorhabditis elegans F-box a protein
protein 50, isoforma protein.
Length = 311
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 32 CTTESRDDHSLLAQFFFADDALNMVAAELDSF 63
CT RD + +FF ++ +++ ELD F
Sbjct: 126 CTKNIRDTVTTFVEFFKSEKCIHVKRIELDKF 157
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.136 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,434,120
Number of Sequences: 27539
Number of extensions: 81361
Number of successful extensions: 195
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 188
Number of HSP's gapped (non-prelim): 10
length of query: 98
length of database: 12,573,161
effective HSP length: 70
effective length of query: 28
effective length of database: 10,645,431
effective search space: 298072068
effective search space used: 298072068
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 52 (25.0 bits)
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