GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002298-TA|BGIBMGA002298-PA|undefined
         (80 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4V729 Cluster: IP08859p; n=39; Metazoa|Rep: IP08859p -...    37   0.067
UniRef50_UPI0000E45E22 Cluster: PREDICTED: similar to HOX11L2; n...    34   0.63 
UniRef50_P34217 Cluster: RNA-binding protein PIN4; n=2; Saccharo...    33   1.5  
UniRef50_Q4D128 Cluster: Mucin-associated surface protein (MASP)...    31   3.4  
UniRef50_A5HKM7 Cluster: Homeodomain protein Tlx; n=3; Coelomata...    31   4.4  
UniRef50_Q4P5W8 Cluster: Putative uncharacterized protein; n=1; ...    31   4.4  
UniRef50_A5DZ92 Cluster: Putative uncharacterized protein; n=1; ...    31   5.9  
UniRef50_Q16QZ5 Cluster: Esophageal cancer associated protein; n...    30   7.7  
UniRef50_Q1E343 Cluster: Putative uncharacterized protein; n=1; ...    30   7.7  

>UniRef50_Q4V729 Cluster: IP08859p; n=39; Metazoa|Rep: IP08859p -
           Drosophila melanogaster (Fruit fly)
          Length = 339

 Score = 37.1 bits (82), Expect = 0.067
 Identities = 26/53 (49%), Positives = 30/53 (56%), Gaps = 12/53 (22%)

Query: 1   MLSLQAEALSKGYIPEPPPSAGLSALHYQTQNNAASQPNNTALSALQNLQPWA 53
           MLSLQAEA+SKG+    PPSA L      +Q       N   L+AL  LQPWA
Sbjct: 291 MLSLQAEAISKGF---APPSAPLG-----SQGGV----NGAPLAALHGLQPWA 331


>UniRef50_UPI0000E45E22 Cluster: PREDICTED: similar to HOX11L2; n=1;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           HOX11L2 - Strongylocentrotus purpuratus
          Length = 440

 Score = 33.9 bits (74), Expect = 0.63
 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 15/79 (18%)

Query: 1   MLSLQAEALSKGYIPEPPPSAGLSALHYQTQNNAASQPNNTALSALQNLQPWAGN-QGSF 59
           M SLQ E + K  + +PPP   L               +N +L+ALQNLQPWA +  G  
Sbjct: 267 MFSLQHEMMMKN-MQDPPPPDPLCV-------------HNASLNALQNLQPWAADMHGGN 312

Query: 60  MNAQTTNXXXXXXXXVASP 78
           + + +TN          +P
Sbjct: 313 IASSSTNTSQTSASASGAP 331


>UniRef50_P34217 Cluster: RNA-binding protein PIN4; n=2;
           Saccharomyces cerevisiae|Rep: RNA-binding protein PIN4 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 668

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 26  LHYQTQNNAASQPNNTALSALQNLQPWAGNQGSFMNAQTT 65
           +H+ +Q N+A QP        QN+Q  A  Q SF+  Q T
Sbjct: 471 IHHSSQYNSADQPQQPQPQTQQNVQSAAQQQQSFLRQQAT 510


>UniRef50_Q4D128 Cluster: Mucin-associated surface protein (MASP),
           putative; n=1; Trypanosoma cruzi|Rep: Mucin-associated
           surface protein (MASP), putative - Trypanosoma cruzi
          Length = 425

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 3   SLQAEALSKGYIPEPPPSAGLSALHYQTQNNAASQPNNT 41
           S+   A  +G    P P A + A  Y+T+NNAAS  +N+
Sbjct: 296 SVNFSATLRGTTDRPIPPAQVEATTYETRNNAASHDSNS 334


>UniRef50_A5HKM7 Cluster: Homeodomain protein Tlx; n=3;
           Coelomata|Rep: Homeodomain protein Tlx - Platynereis
           dumerilii (Dumeril's clam worm)
          Length = 325

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 12/20 (60%), Positives = 15/20 (75%)

Query: 39  NNTALSALQNLQPWAGNQGS 58
           NN +L ALQ LQPWA  +G+
Sbjct: 285 NNASLHALQRLQPWADEKGN 304


>UniRef50_Q4P5W8 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 369

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 17  PPPSAGLSA-LHYQTQNNAASQPNNTA-LSALQNLQPWAGNQGS 58
           P PS  +SA L+       A QP ++A LSALQ L PWA   GS
Sbjct: 250 PKPSQLISAALNRSPAPETAHQPPSSADLSALQTLIPWAMQVGS 293


>UniRef50_A5DZ92 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 429

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 7   EALSKGYIPEPPPSAGLSALHYQTQNNAASQPNNTALSALQ 47
           EAL K  + +PPPS+  S+L   +Q +A+S P+   LS L+
Sbjct: 61  EALEKEQLLQPPPSSSSSSLPSSSQ-SASSAPSPKKLSKLE 100


>UniRef50_Q16QZ5 Cluster: Esophageal cancer associated protein; n=4;
           Endopterygota|Rep: Esophageal cancer associated protein
           - Aedes aegypti (Yellowfever mosquito)
          Length = 981

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 41  TALSALQNLQPWAGNQGSFMNAQTTN 66
           T L  L  ++PWAG +G  +N  TTN
Sbjct: 114 TNLLELDLIEPWAGRRGPILNKYTTN 139


>UniRef50_Q1E343 Cluster: Putative uncharacterized protein; n=1;
          Coccidioides immitis|Rep: Putative uncharacterized
          protein - Coccidioides immitis
          Length = 968

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 15 PEPPPSAGLSALHYQTQNNAASQP--NNTALSALQNLQ 50
          P+PPPS   SA    T N AAS P  N+  ++ + N Q
Sbjct: 34 PQPPPSPIASASRPGTTNQAASSPSMNSVTINGVSNRQ 71


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.308    0.120    0.351 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,021,608
Number of Sequences: 1657284
Number of extensions: 2628593
Number of successful extensions: 7239
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 7232
Number of HSP's gapped (non-prelim): 9
length of query: 80
length of database: 575,637,011
effective HSP length: 59
effective length of query: 21
effective length of database: 477,857,255
effective search space: 10035002355
effective search space used: 10035002355
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 65 (30.3 bits)