Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002298-TA|BGIBMGA002298-PA|undefined
(80 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC033499-1|AAH33499.1| 613|Homo sapiens coiled-coil domain cont... 29 1.8
AK093365-1|BAC04145.1| 515|Homo sapiens ACT) mRNA. protein. 29 1.8
BC006356-1|AAH06356.1| 284|Homo sapiens T-cell leukemia homeobo... 29 3.1
AJ002607-1|CAA05636.1| 275|Homo sapiens HOX11L1 protein. 29 3.1
AB008501-1|BAA83463.1| 284|Homo sapiens NCX protein. 29 3.1
U96136-1|AAC63103.1| 1225|Homo sapiens delta-catenin protein. 28 5.5
AB013805-1|BAA36163.1| 1225|Homo sapiens neural plakophilin-rela... 28 5.5
U81004-1|AAD00453.1| 1040|Homo sapiens GT24 protein. 27 7.2
S38742-1|AAB19293.1| 330|Homo sapiens HOX11 protein. 27 7.2
M75952-1|AAA58662.1| 330|Homo sapiens homeobox protein protein. 27 7.2
M62626-1|AAA36719.1| 330|Homo sapiens homeobox protein protein. 27 7.2
BC031303-1|AAH31303.1| 183|Homo sapiens ankyrin repeat domain 3... 27 7.2
AL357395-1|CAH72448.1| 330|Homo sapiens T-cell leukemia, homeob... 27 7.2
AJ009794-2|CAA08834.1| 330|Homo sapiens HOX11 protein protein. 27 7.2
AC092636-4|AAY14966.1| 183|Homo sapiens unknown protein. 27 7.2
AB209367-1|BAD92604.1| 192|Homo sapiens hypothetical protein MG... 27 7.2
BC017291-1|AAH17291.1| 291|Homo sapiens T-cell leukemia homeobo... 27 9.5
AJ223798-1|CAA11550.1| 291|Homo sapiens HOX11L2 protein. 27 9.5
>BC033499-1|AAH33499.1| 613|Homo sapiens coiled-coil domain
containing 116 protein.
Length = 613
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 8 ALSKGYIPEPPPSAGLSALHYQTQNNAASQPNNTALSALQNLQ 50
A G +P PP + G SAL Q +N QP L L Q
Sbjct: 39 ACKPGRVPHPPSTCGSSALQGQRRNKRHPQPFGHFLDFLTESQ 81
>AK093365-1|BAC04145.1| 515|Homo sapiens ACT) mRNA. protein.
Length = 515
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 8 ALSKGYIPEPPPSAGLSALHYQTQNNAASQPNNTALSALQNLQ 50
A G +P PP + G SAL Q +N QP L L Q
Sbjct: 39 ACKPGRVPHPPSTCGSSALQGQRRNKRHPQPFGHFLDFLTESQ 81
>BC006356-1|AAH06356.1| 284|Homo sapiens T-cell leukemia homeobox 2
protein.
Length = 284
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 39 NNTALSALQNLQPWA 53
+N++L ALQNLQPWA
Sbjct: 255 HNSSLFALQNLQPWA 269
>AJ002607-1|CAA05636.1| 275|Homo sapiens HOX11L1 protein.
Length = 275
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 39 NNTALSALQNLQPWA 53
+N++L ALQNLQPWA
Sbjct: 246 HNSSLFALQNLQPWA 260
>AB008501-1|BAA83463.1| 284|Homo sapiens NCX protein.
Length = 284
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 39 NNTALSALQNLQPWA 53
+N++L ALQNLQPWA
Sbjct: 255 HNSSLFALQNLQPWA 269
>U96136-1|AAC63103.1| 1225|Homo sapiens delta-catenin protein.
Length = 1225
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 13 YIPEPPPSAGLSALHYQTQNNAASQPNNTALSALQNLQP 51
++P+ PP+A +AL+Y + A + L+A Q P
Sbjct: 239 HLPDAPPAAAAAALYYSSSTLPAPPRGGSPLAAPQGGSP 277
>AB013805-1|BAA36163.1| 1225|Homo sapiens neural plakophilin-related
arm-repeat protein (NPRAP) protein.
Length = 1225
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 13 YIPEPPPSAGLSALHYQTQNNAASQPNNTALSALQNLQP 51
++P+ PP+A +AL+Y + A + L+A Q P
Sbjct: 239 HLPDAPPAAAAAALYYSSSTLPAPPRGGSPLAAPQGGSP 277
>U81004-1|AAD00453.1| 1040|Homo sapiens GT24 protein.
Length = 1040
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 13 YIPEPPPSAGLSALHYQTQNNAASQPNNTALSALQNLQP 51
++P+ PP+A +AL+Y A + L+A Q P
Sbjct: 54 HLPDAPPAAAAAALYYSXSTLPAPPRGGSPLAAPQGGSP 92
>S38742-1|AAB19293.1| 330|Homo sapiens HOX11 protein.
Length = 330
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/15 (66%), Positives = 14/15 (93%)
Query: 39 NNTALSALQNLQPWA 53
+N++L ALQNLQPW+
Sbjct: 299 HNSSLFALQNLQPWS 313
>M75952-1|AAA58662.1| 330|Homo sapiens homeobox protein protein.
Length = 330
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/15 (66%), Positives = 14/15 (93%)
Query: 39 NNTALSALQNLQPWA 53
+N++L ALQNLQPW+
Sbjct: 299 HNSSLFALQNLQPWS 313
>M62626-1|AAA36719.1| 330|Homo sapiens homeobox protein protein.
Length = 330
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/15 (66%), Positives = 14/15 (93%)
Query: 39 NNTALSALQNLQPWA 53
+N++L ALQNLQPW+
Sbjct: 299 HNSSLFALQNLQPWS 313
>BC031303-1|AAH31303.1| 183|Homo sapiens ankyrin repeat domain 39
protein.
Length = 183
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 9 LSKGYIPEPPPSAGLSALHYQTQN 32
+ K P P SAG +ALHY ++N
Sbjct: 51 IQKAEDPSQPDSAGYTALHYASRN 74
>AL357395-1|CAH72448.1| 330|Homo sapiens T-cell leukemia, homeobox
1 protein.
Length = 330
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/15 (66%), Positives = 14/15 (93%)
Query: 39 NNTALSALQNLQPWA 53
+N++L ALQNLQPW+
Sbjct: 299 HNSSLFALQNLQPWS 313
>AJ009794-2|CAA08834.1| 330|Homo sapiens HOX11 protein protein.
Length = 330
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/15 (66%), Positives = 14/15 (93%)
Query: 39 NNTALSALQNLQPWA 53
+N++L ALQNLQPW+
Sbjct: 299 HNSSLFALQNLQPWS 313
>AC092636-4|AAY14966.1| 183|Homo sapiens unknown protein.
Length = 183
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 9 LSKGYIPEPPPSAGLSALHYQTQN 32
+ K P P SAG +ALHY ++N
Sbjct: 51 IQKAEDPSQPDSAGYTALHYASRN 74
>AB209367-1|BAD92604.1| 192|Homo sapiens hypothetical protein
MGC41816 variant protein.
Length = 192
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 9 LSKGYIPEPPPSAGLSALHYQTQN 32
+ K P P SAG +ALHY ++N
Sbjct: 60 IQKAEDPSQPDSAGYTALHYASRN 83
>BC017291-1|AAH17291.1| 291|Homo sapiens T-cell leukemia homeobox 3
protein.
Length = 291
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 39 NNTALSALQNLQPW 52
+N++L ALQNLQPW
Sbjct: 264 HNSSLFALQNLQPW 277
>AJ223798-1|CAA11550.1| 291|Homo sapiens HOX11L2 protein.
Length = 291
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 39 NNTALSALQNLQPW 52
+N++L ALQNLQPW
Sbjct: 264 HNSSLFALQNLQPW 277
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.308 0.120 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,138,530
Number of Sequences: 224733
Number of extensions: 357990
Number of successful extensions: 1004
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 986
Number of HSP's gapped (non-prelim): 18
length of query: 80
length of database: 73,234,838
effective HSP length: 58
effective length of query: 22
effective length of database: 60,200,324
effective search space: 1324407128
effective search space used: 1324407128
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 57 (27.1 bits)
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