Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002298-TA|BGIBMGA002298-PA|undefined
(80 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 0.39
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 0.39
L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical pr... 28 0.68
Z81055-7|CAB02897.2| 445|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 2.1
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 2.1
U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical pr... 26 2.7
U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical pr... 26 2.7
U39646-4|AAA80370.1| 215|Caenorhabditis elegans Hypothetical pr... 25 4.8
AF016431-1|AAC24248.2| 311|Caenorhabditis elegans Hypothetical ... 25 4.8
U40942-9|AAC47074.6| 703|Caenorhabditis elegans Synaptogenesis ... 25 6.3
U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical pr... 25 8.4
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 25 8.4
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 25 8.4
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 25 8.4
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 25 8.4
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 29.1 bits (62), Expect = 0.39
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 13 YIPEPPPSAGLSALHYQTQNNAASQPNNTALSALQNLQPWAGNQGSFMNAQT 64
YIPEP ++ ++++ + +S P N LS +N Q A G ++ Q+
Sbjct: 84 YIPEPTQNSSMASMSSTPSSGQSSSPRNAELSPQRN-QMEARRGGPHLSVQS 134
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 29.1 bits (62), Expect = 0.39
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 13 YIPEPPPSAGLSALHYQTQNNAASQPNNTALSALQNLQPWAGNQGSFMNAQT 64
YIPEP ++ ++++ + +S P N LS +N Q A G ++ Q+
Sbjct: 84 YIPEPTQNSSMASMSSTPSSGQSSSPRNAELSPQRN-QMEARRGGPHLSVQS 134
>L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical
protein ZC21.3 protein.
Length = 321
Score = 28.3 bits (60), Expect = 0.68
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 18 PPSAGLSALHYQTQNNAASQPNNTALSALQNLQPWAGNQGSFMNAQTTN 66
P S+ + + NN NN + Q Q + NQGS+ N N
Sbjct: 164 PQSSNQNQVLRDQSNNQGYMNNNQGMYNTQTTQGYGNNQGSYQNQMMYN 212
>Z81055-7|CAB02897.2| 445|Caenorhabditis elegans Hypothetical
protein F01G10.9 protein.
Length = 445
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 15 PEPPPSAGLSALHYQTQNNAASQPNNTALSALQNLQPWAGNQ 56
P PPS+ + ++ ++S +N+A+ N Q GNQ
Sbjct: 167 PLSPPSSSANVSKQRSYTTSSSSSSNSAIERYNNQQNKIGNQ 208
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 26.6 bits (56), Expect = 2.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 13 YIPEPPPSAGLSALHYQTQNNAASQPNNTALS 44
YIPEP ++ ++++ + +S P N LS
Sbjct: 84 YIPEPTQNSSMASMSSTPSSGQSSSPRNAELS 115
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 26.6 bits (56), Expect = 2.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 13 YIPEPPPSAGLSALHYQTQNNAASQPNNTALS 44
YIPEP ++ ++++ + +S P N LS
Sbjct: 84 YIPEPTQNSSMASMSSTPSSGQSSSPRNAELS 115
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 26.6 bits (56), Expect = 2.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 13 YIPEPPPSAGLSALHYQTQNNAASQPNNTALS 44
YIPEP ++ ++++ + +S P N LS
Sbjct: 84 YIPEPTQNSSMASMSSTPSSGQSSSPRNAELS 115
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 26.6 bits (56), Expect = 2.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 13 YIPEPPPSAGLSALHYQTQNNAASQPNNTALS 44
YIPEP ++ ++++ + +S P N LS
Sbjct: 84 YIPEPTQNSSMASMSSTPSSGQSSSPRNAELS 115
>U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical
protein C18B2.5b protein.
Length = 699
Score = 26.2 bits (55), Expect = 2.7
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 21 AGLSALHYQTQNNAASQPNNTALSALQNLQPWAGNQGSFMN 61
A +S L Y NN+ P T +S LQ+ W S N
Sbjct: 623 ANISFLEYYKVNNSGFAPLPTGISKLQHNLYWTHGTASLEN 663
>U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical
protein C18B2.5a protein.
Length = 673
Score = 26.2 bits (55), Expect = 2.7
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 21 AGLSALHYQTQNNAASQPNNTALSALQNLQPWAGNQGSFMN 61
A +S L Y NN+ P T +S LQ+ W S N
Sbjct: 597 ANISFLEYYKVNNSGFAPLPTGISKLQHNLYWTHGTASLEN 637
>U39646-4|AAA80370.1| 215|Caenorhabditis elegans Hypothetical
protein F47B7.6 protein.
Length = 215
Score = 25.4 bits (53), Expect = 4.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 15 PEPPPSAGLSALHYQTQNNAASQPNNTALSALQNLQP 51
P PPP A HY + P+ + L+A ++ P
Sbjct: 101 PPPPPERSYHADHYAVDTYDSRLPSTSQLAASRDHMP 137
>AF016431-1|AAC24248.2| 311|Caenorhabditis elegans Hypothetical
protein C10B5.1 protein.
Length = 311
Score = 25.4 bits (53), Expect = 4.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 9 LSKGYIPEPPPSAGLSALHY 28
LSK IP PP +AG SA+ +
Sbjct: 225 LSKQEIPYPPDAAGCSAISF 244
>U40942-9|AAC47074.6| 703|Caenorhabditis elegans Synaptogenesis
abnormal protein 1 protein.
Length = 703
Score = 25.0 bits (52), Expect = 6.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 2 LSLQAEALSKGYIPEPPPSAGLSALHYQTQNNAASQPNNTALSAL 46
++++ EAL Y PE S+ + +H T++ + NN L L
Sbjct: 592 VTVKCEALDGQYFPEMYSSSPVDNVHLSTKDYISIPQNNPDLDFL 636
>U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical
protein C13B9.3 protein.
Length = 515
Score = 24.6 bits (51), Expect = 8.4
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 5 QAEALSKGYIPEPPPSAGLSALHYQTQNNAA-SQPNNTALSALQNLQPWAGNQGSFMNAQ 63
Q EALS+G P S G+S+ T N AA S+P SA + P G + + +
Sbjct: 176 QKEALSRGLKPSYQSSTGISS--SSTPNAAAVSEPAAPRPSAPKG--PIGGGKALKLGGK 231
Query: 64 TTN 66
T N
Sbjct: 232 TNN 234
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 31 QNNAASQPNNTALSALQNLQPWAGNQGS 58
QN AAS+P A A +N QP N G+
Sbjct: 358 QNKAASRPAVPAGGAARNRQPLRVNPGT 385
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 31 QNNAASQPNNTALSALQNLQPWAGNQGS 58
QN AAS+P A A +N QP N G+
Sbjct: 358 QNKAASRPAVPAGGAARNRQPLRVNPGT 385
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 31 QNNAASQPNNTALSALQNLQPWAGNQGS 58
QN AAS+P A A +N QP N G+
Sbjct: 358 QNKAASRPAVPAGGAARNRQPLRVNPGT 385
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 31 QNNAASQPNNTALSALQNLQPWAGNQGS 58
QN AAS+P A A +N QP N G+
Sbjct: 358 QNKAASRPAVPAGGAARNRQPLRVNPGT 385
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.308 0.120 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,722,903
Number of Sequences: 27539
Number of extensions: 54854
Number of successful extensions: 159
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 142
Number of HSP's gapped (non-prelim): 18
length of query: 80
length of database: 12,573,161
effective HSP length: 60
effective length of query: 20
effective length of database: 10,920,821
effective search space: 218416420
effective search space used: 218416420
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 51 (24.6 bits)
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