Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002297-TA|BGIBMGA002297-PA|undefined
(186 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 37 0.012
SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_5728| Best HMM Match : Band_41 (HMM E-Value=1e-26) 31 0.58
SB_7638| Best HMM Match : TFIID_30kDa (HMM E-Value=3) 31 0.77
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 29 3.1
SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_41749| Best HMM Match : Homeobox (HMM E-Value=4.1e-29) 28 5.4
SB_59295| Best HMM Match : SET (HMM E-Value=0) 27 7.1
SB_49533| Best HMM Match : Ldh_2 (HMM E-Value=0) 27 7.1
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 27 7.1
SB_56887| Best HMM Match : TolA (HMM E-Value=0.66) 27 7.1
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_5197| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6) 27 9.4
SB_43027| Best HMM Match : U79_P34 (HMM E-Value=0.066) 27 9.4
SB_41994| Best HMM Match : F-box (HMM E-Value=1.4e-06) 27 9.4
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_25949| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_11327| Best HMM Match : Upf2 (HMM E-Value=5.9) 27 9.4
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 36.7 bits (81), Expect = 0.012
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 10 QEEINVD--SDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDHMTETQPRVNL------ 61
QEE+ V+ D LS H D++ ASED D+ + +DS ++H +E +P V +
Sbjct: 2824 QEEVEVEHVDDKILSDHDDKTPASEDIDNYDEHETHQKDSEDEH-SEDEPGVIITGVFLE 2882
Query: 62 PFSISRLLGKQFEDIDKRRNSGESDDRSDQD 92
+ RLL + ED E D S+++
Sbjct: 2883 EVEVKRLLEGEREDGPSCEEVDEEKDISEEE 2913
>SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 31.1 bits (67), Expect = 0.58
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 5 HSDDDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDHMTETQPRVNLPFS 64
HSD D EE V + GH D ++ +D H+ D +D + + R ++ S
Sbjct: 389 HSDSDNEETMVITFEADGGHPDEQDDNQHQDEVDGGHD---DDEDDDDDDARHRPHMDES 445
Query: 65 ISRLLGKQFEDIDKRRNSGESDDRSDQD 92
++ E+ D + E DD D+D
Sbjct: 446 QGDVVVMD-EEADDDDDDDEDDDDDDED 472
>SB_5728| Best HMM Match : Band_41 (HMM E-Value=1e-26)
Length = 906
Score = 31.1 bits (67), Expect = 0.58
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 12 EINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDHMTETQPRVNLPFSISRLLGK 71
EIN D+ S ++GH S D D E S HE + SP ++ Q L ++ G+
Sbjct: 814 EINADNSSVVTGHTSGYSTSADSDEEPSAHE--QSSPEIPLSREQQLAELEKMLAE--GQ 869
Query: 72 QFEDIDKRRNSGE 84
+ + K E
Sbjct: 870 VYTEYQKTSRKSE 882
>SB_7638| Best HMM Match : TFIID_30kDa (HMM E-Value=3)
Length = 314
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 19 SRLSGHC--DRSIASEDRDSEHSYHERFRDSPNDHM 52
S + HC + ++ASE R+SEH+Y + +D H+
Sbjct: 40 SLAASHCMGEETLASETRESEHNYKDNAKDEGKVHI 75
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/86 (20%), Positives = 39/86 (45%)
Query: 6 SDDDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDHMTETQPRVNLPFSI 65
SD+D++E + ++ + + + ED+DS+ + D +D T R P ++
Sbjct: 858 SDEDEDEGEEEEEAAVPVLKEEILELEDQDSDSDDDDDDDDDDDDCKKSTLERDMTPRTM 917
Query: 66 SRLLGKQFEDIDKRRNSGESDDRSDQ 91
+ L K + +R+ E + +Q
Sbjct: 918 RKSLSKSTRERMERKRREEEERAKEQ 943
>SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 5 HSDDDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDH 51
H DD + E + D D + H D+ +D+D H E +DH
Sbjct: 378 HQDDKEAEHHDDKDEQ---HDDKDEHRDDKDDHHDEDEHDEKKGDDH 421
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 5 HSDDDQEEINVDSDSRLSGHCDRSIAS--EDRDSEHSYHERFRDSPNDHMTETQ 56
HS+D+ ++ + ++ H D A +D+D +H + RD +DH E +
Sbjct: 361 HSEDEYDKEHEEASK--DDHQDDKEAEHHDDKDEQHDDKDEHRDDKDDHHDEDE 412
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 2 SSVHSDDDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDHMTETQPRVNL 61
SSV D D+E+ D D G +D++ + +++ + +E + N
Sbjct: 153 SSVAKDSDEEKRKSDDDENKEGGVRSKRVDQDQEKAKEEGKAEKEAERNDSSEDE---NK 209
Query: 62 PFSISRLLGKQFEDIDKRRNSGESDDRSDQ 91
K+ E+ + R N G D++S +
Sbjct: 210 DSDAKAAQTKEVEEEEVRSNRGNLDEQSTE 239
>SB_41749| Best HMM Match : Homeobox (HMM E-Value=4.1e-29)
Length = 269
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 47 SPNDHMTETQPRVNLPFSISRLLGKQFEDIDKRRNSGESDDRSDQDT 93
S N T T PR FSIS LLG + E+++K + E D++T
Sbjct: 4 SENSASTNT-PRAG--FSISNLLGLESENMEKFQKLDEYSTSKDEET 47
>SB_59295| Best HMM Match : SET (HMM E-Value=0)
Length = 1230
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 29 IASEDRDSEHSYHERFRDSP-NDHMTETQPRVNLPFSISRLLGKQFEDIDKRRNSGESD 86
+AS+ E S E+ +S N +T T+ + P + L GK +DIDK SD
Sbjct: 721 LASDPYGKEISAPEQGDESDVNVEITATEKKPVTPENTKDLKGKSRDDIDKEARGAASD 779
>SB_49533| Best HMM Match : Ldh_2 (HMM E-Value=0)
Length = 883
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 3 SVHSDDDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDS 47
S H DDD +E N D D + D +D ++ H+R + S
Sbjct: 830 SDHPDDDDDENNDDDDDEIP--TDDEADDDDDSDDNGIHDRRKKS 872
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 30 ASEDRDSEHSYHERFRDSPNDHMTETQPRVNLPFSISRLLGKQFED 75
A ED+ +E + ++ + D ++T P+V P +LG + D
Sbjct: 169 AKEDKPAEKAKEDKAGPAKEDKPSKTSPKVGKPHPKGEILGGESSD 214
>SB_56887| Best HMM Match : TolA (HMM E-Value=0.66)
Length = 404
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 8 DDQEEINVDSDSRLSGHCDRSIASEDRDSEH 38
+D++E +SDS S S +S+D DS+H
Sbjct: 220 EDKDESGNESDSSSSSSSSSSSSSDDDDSDH 250
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 27.5 bits (58), Expect = 7.1
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Query: 3 SVHSDDDQEEINVDSDSRLS-GHCDRSIASEDRDSEHSYHERFRDSPNDHMTETQPRVNL 61
S DDD+EE +S+S S + SE+ DSE S E D + E N
Sbjct: 688 SEQEDDDKEESESESESEESEEESEEEEESEESDSEESEEEEEEIKEKD-IAEQLEEENK 746
Query: 62 PFSISRLLGKQFEDIDKRRNSGESDDRS 89
S +L ++ +I + +D S
Sbjct: 747 ISEASEVLVERASEIGSAKPKDVADKSS 774
>SB_5197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 2 SSVHSDDDQEEINVDSDSRLSGHCDRSI 29
+S+ +QEEIN+D+DS+ S SI
Sbjct: 733 ASISDGGEQEEINLDTDSKQSRQIANSI 760
>SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6)
Length = 192
Score = 27.1 bits (57), Expect = 9.4
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 15/93 (16%)
Query: 5 HSD-DDQEEINVDSD----SRLSGHCDRSIASEDRDSEHSYHERFRDSPNDHMTETQPRV 59
H D D+E N D D R + H DR + D E H+ R+ + + R
Sbjct: 107 HEDRHDEERNNEDEDRHDEERNNEHEDRHDKGRNDDEEEDRHDGERNDDEEEDRHDEERN 166
Query: 60 NLPFSISRLLGKQFEDIDKRRNSGESDDRSDQD 92
+ + + D++RN E +DR D+D
Sbjct: 167 D----------DEEDRHDEKRNEDEEEDRHDED 189
>SB_43027| Best HMM Match : U79_P34 (HMM E-Value=0.066)
Length = 443
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 7 DDDQEEINVDSDSRLSGHCDRSIASE--DRDSEHSYHE 42
DDD + V+ S + H D + ++E D++SEH ++
Sbjct: 404 DDDDDTFVVEDPSTMQNHVDSTPSNESLDQESEHGKND 441
>SB_41994| Best HMM Match : F-box (HMM E-Value=1.4e-06)
Length = 1020
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 6 SDDDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDHMTETQPRVNLPFSI 65
S++D E I + + ED D+E + P++++++T+ P
Sbjct: 444 SEEDNENIEPNESDSQRKTSEEHAQEEDNDNEEG-----EEDPDENLSQTKQGEGRPLDQ 498
Query: 66 SR-LLGKQFEDIDK--RRNSGESDDRSDQD 92
R +G+ F DK +R + +D+ ++D
Sbjct: 499 PRPNVGRSFGQSDKKIKRPNAAADNGDEED 528
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 9 DQEEINVDSDSRLSGHC---DRSIASEDRDSEHSYHERFRDSPNDHMTETQPR 58
++E +V SD L+G D ASE+ + + S + D+P + T +P+
Sbjct: 173 EEENPDVPSDEPLTGGTEEDDEKEASEEEEGKPSLEDGTEDTPEANKTPEEPK 225
>SB_25949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 5 HSDDDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDH 51
H D D + D D H D ++D D + H+ D +DH
Sbjct: 398 HEDSDDTVYHDDIDDDTYDHDDIDDDTDDIDDDTDEHDDIDDDTDDH 444
>SB_11327| Best HMM Match : Upf2 (HMM E-Value=5.9)
Length = 564
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 7 DDDQEEINVDSDSRLSGHCDRSIASEDRD 35
DDD E+N D D+ ++ D + + D D
Sbjct: 27 DDDDNEVNADDDNEVNAADDNVVNAADDD 55
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.129 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,022,211
Number of Sequences: 59808
Number of extensions: 190375
Number of successful extensions: 615
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 586
Number of HSP's gapped (non-prelim): 37
length of query: 186
length of database: 16,821,457
effective HSP length: 78
effective length of query: 108
effective length of database: 12,156,433
effective search space: 1312894764
effective search space used: 1312894764
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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