GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002297-TA|BGIBMGA002297-PA|undefined
         (186 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025203-1|ABF17894.1|  339|Drosophila melanogaster FI01111p pro...    43   3e-04
BT022127-1|AAY51522.1|  339|Drosophila melanogaster IP08859p pro...    43   3e-04
AE014297-3013|AAF55898.2|  339|Drosophila melanogaster CG7937-PA...    43   3e-04
Z22959-1|CAA80535.1|  307|Drosophila melanogaster homeodomain-co...    33   0.31 
AY089552-1|AAL90290.1| 1253|Drosophila melanogaster LD30834p pro...    33   0.31 
AE014297-2213|AAF55319.2| 1298|Drosophila melanogaster CG14896-P...    33   0.31 
AY094814-1|AAM11167.1|  357|Drosophila melanogaster LD30817p pro...    29   2.9  
AE014297-2012|AAF55171.2|  357|Drosophila melanogaster CG6226-PA...    29   2.9  
Z46894-1|CAA86996.1|  357|Drosophila melanogaster FKBP39 protein.      28   6.7  
X56232-1|CAA39689.1|  568|Drosophila melanogaster disco gene pro...    28   8.9  
BT003295-1|AAO25055.1|  568|Drosophila melanogaster GH27656p pro...    28   8.9  
AE014298-2336|ABC67185.1|  568|Drosophila melanogaster CG9908-PB...    28   8.9  
AE014298-2335|AAF48568.1|  568|Drosophila melanogaster CG9908-PA...    28   8.9  
AE014296-3079|AAF49213.2|  366|Drosophila melanogaster CG6843-PA...    28   8.9  

>BT025203-1|ABF17894.1|  339|Drosophila melanogaster FI01111p
          protein.
          Length = 339

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 7/79 (8%)

Query: 8  DDQE-EINVDSDSRLSGHCDRSIASEDRDSEHSYHER---FRDSPNDHMTETQPRVNLPF 63
          ++QE  ++VDSDSR+S  C  S +  D D    Y E      +S     T +    NLPF
Sbjct: 20 EEQEIHVDVDSDSRMS--CG-SGSDVDMDGGSCYDESETPLSESLQSEQTRSSSSENLPF 76

Query: 64 SISRLLGKQFEDIDKRRNS 82
          SISRLL K FE      N+
Sbjct: 77 SISRLLSKPFETSHHHHNN 95


>BT022127-1|AAY51522.1|  339|Drosophila melanogaster IP08859p
          protein.
          Length = 339

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 7/79 (8%)

Query: 8  DDQE-EINVDSDSRLSGHCDRSIASEDRDSEHSYHER---FRDSPNDHMTETQPRVNLPF 63
          ++QE  ++VDSDSR+S  C  S +  D D    Y E      +S     T +    NLPF
Sbjct: 20 EEQEIHVDVDSDSRMS--CG-SGSDVDMDGGSCYDESETPLSESLQSEQTRSSSSENLPF 76

Query: 64 SISRLLGKQFEDIDKRRNS 82
          SISRLL K FE      N+
Sbjct: 77 SISRLLSKPFETSHHHHNN 95


>AE014297-3013|AAF55898.2|  339|Drosophila melanogaster CG7937-PA
          protein.
          Length = 339

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 7/79 (8%)

Query: 8  DDQE-EINVDSDSRLSGHCDRSIASEDRDSEHSYHER---FRDSPNDHMTETQPRVNLPF 63
          ++QE  ++VDSDSR+S  C  S +  D D    Y E      +S     T +    NLPF
Sbjct: 20 EEQEIHVDVDSDSRMS--CG-SGSDVDMDGGSCYDESETPLSESLQSEQTRSSSSENLPF 76

Query: 64 SISRLLGKQFEDIDKRRNS 82
          SISRLL K FE      N+
Sbjct: 77 SISRLLSKPFETSHHHHNN 95


>Z22959-1|CAA80535.1|  307|Drosophila melanogaster
          homeodomain-containing protein protein.
          Length = 307

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 33 DRDSEHSYHER---FRDSPNDHMTETQPRVNLPFSISRLLGKQFEDIDKRRNS 82
          D D    Y E      +S     T +    NLPFSISRLL K FE      N+
Sbjct: 10 DMDGGSCYDESETPLSESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNN 62


>AY089552-1|AAL90290.1| 1253|Drosophila melanogaster LD30834p
           protein.
          Length = 1253

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 15  VDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDHMTE--TQPRVNLPFS--ISRLLG 70
           VDSD  L    D + +S+D+ SE S H    DS +   T+  T  R   P S  +S L+ 
Sbjct: 149 VDSDQNLLSVKDEAGSSQDKPSEKSIHSTSTDSKSKERTDITTSKRTIFPESTEMSGLIS 208

Query: 71  KQFEDIDKRRNSGES 85
           K     +K  +  ES
Sbjct: 209 KPSNSEEKLTHEEES 223


>AE014297-2213|AAF55319.2| 1298|Drosophila melanogaster CG14896-PA
           protein.
          Length = 1298

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 15  VDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDHMTE--TQPRVNLPFS--ISRLLG 70
           VDSD  L    D + +S+D+ SE S H    DS +   T+  T  R   P S  +S L+ 
Sbjct: 194 VDSDQNLLSVKDEAGSSQDKPSEKSIHSTSTDSKSKERTDITTSKRTIFPESTEMSGLIS 253

Query: 71  KQFEDIDKRRNSGES 85
           K     +K  +  ES
Sbjct: 254 KPSNSEEKLTHEEES 268


>AY094814-1|AAM11167.1|  357|Drosophila melanogaster LD30817p
           protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 8   DDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDHMTETQPRVNL----PF 63
           DD  +I  + +S L    +      D D+E S  E  +DS +    E QP+  +    P 
Sbjct: 136 DDDSQIIEEYESFLENGEEEDDDDVDEDNEESGEEDEQDSDDSEAEEEQPKAKVAKLSPG 195

Query: 64  SISRLLGKQFEDIDKRRNSGESDDRSDQ 91
           + ++  GK+   + K+  + +   + ++
Sbjct: 196 ASAKKSGKEQNGVAKKEEAKQQQKKKEK 223


>AE014297-2012|AAF55171.2|  357|Drosophila melanogaster CG6226-PA
           protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 8   DDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDHMTETQPRVNL----PF 63
           DD  +I  + +S L    +      D D+E S  E  +DS +    E QP+  +    P 
Sbjct: 136 DDDSQIIEEYESFLENGEEEDDDDVDEDNEESGEEDEQDSDDSEAEEEQPKAKVAKLSPG 195

Query: 64  SISRLLGKQFEDIDKRRNSGESDDRSDQ 91
           + ++  GK+   + K+  + +   + ++
Sbjct: 196 ASAKKSGKEQNGVAKKEEAKQQQKKKEK 223


>Z46894-1|CAA86996.1|  357|Drosophila melanogaster FKBP39 protein.
          Length = 357

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 8   DDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPNDHMTETQPRVNL----PF 63
           DD  +I  + +S L    +      D D+E S  E  +DS +    E QP+  +    P 
Sbjct: 136 DDDSQIIEEYESFLENGEEEDDDDVDEDNEESGEEDEQDSDDSEAEEEQPKRKVAKLSPG 195

Query: 64  SISRLLGKQFEDIDKRRNSGESDDRSDQ 91
           + ++  GK+   + K+  + +   + ++
Sbjct: 196 ASAKKSGKEQNGVAKKEEAKQQQKKKEK 223


>X56232-1|CAA39689.1|  568|Drosophila melanogaster disco gene
           protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 2   SSVHSDDDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPND 50
           S   S +DQEE   D++     HC  S+AS    S  +  ER  D P D
Sbjct: 258 SPAASSEDQEEHERDNEQDEEMHCSLSLASS--SSIAADEERAADQPLD 304


>BT003295-1|AAO25055.1|  568|Drosophila melanogaster GH27656p
           protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 2   SSVHSDDDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPND 50
           S   S +DQEE   D++     HC  S+AS    S  +  ER  D P D
Sbjct: 258 SPAASSEDQEEHERDNEQDEEMHCSLSLASS--SSIAADEERAADQPLD 304


>AE014298-2336|ABC67185.1|  568|Drosophila melanogaster CG9908-PB,
           isoform B protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 2   SSVHSDDDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPND 50
           S   S +DQEE   D++     HC  S+AS    S  +  ER  D P D
Sbjct: 258 SPAASSEDQEEHERDNEQDEEMHCSLSLASS--SSIAADEERAADQPLD 304


>AE014298-2335|AAF48568.1|  568|Drosophila melanogaster CG9908-PA,
           isoform A protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 2   SSVHSDDDQEEINVDSDSRLSGHCDRSIASEDRDSEHSYHERFRDSPND 50
           S   S +DQEE   D++     HC  S+AS    S  +  ER  D P D
Sbjct: 258 SPAASSEDQEEHERDNEQDEEMHCSLSLASS--SSIAADEERAADQPLD 304


>AE014296-3079|AAF49213.2|  366|Drosophila melanogaster CG6843-PA
           protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 6   SDDDQEEINVDS-DSRLSGHCD--RSIASEDRDSEHSYHERFRDSPNDHMTETQPRVNLP 62
           SD      + DS D+  S H D  R+     RDS+HSY    R + N H  +     +  
Sbjct: 290 SDSSSSSDSSDSEDNHKSNHRDDKRNGHQRTRDSDHSYQR--RSNENRHRRDRSRSRDRS 347

Query: 63  FSISRLLGKQFEDIDKRR 80
            S+SR   ++ E  D+ R
Sbjct: 348 RSLSRDRRRERERRDRSR 365


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.313    0.129    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,321,298
Number of Sequences: 52641
Number of extensions: 264238
Number of successful extensions: 992
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 983
Number of HSP's gapped (non-prelim): 19
length of query: 186
length of database: 24,830,863
effective HSP length: 81
effective length of query: 105
effective length of database: 20,566,942
effective search space: 2159528910
effective search space used: 2159528910
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)