GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002296-TA|BGIBMGA002296-PA|undefined
         (199 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   0.72 
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    24   0.95 
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    24   0.95 
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    24   0.95 
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   1.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   1.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   2.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.8  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   3.8  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   3.8  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   6.7  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   8.8  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 0.72
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query: 106 ISPNTRVRDLKQALSERGVKPQ 127
           ++PN RV+D+    S+R V+P+
Sbjct: 659 LTPNMRVQDVTIKFSDRTVRPK 680


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 9/34 (26%), Positives = 19/34 (55%)

Query: 88  RRPKRQRPVIDFSVKISNISPNTRVRDLKQALSE 121
           +RPK  +P+ DF + + N     R  D+ + +++
Sbjct: 327 QRPKPFKPITDFELAVPNFLKLQRGSDISKLVAK 360


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 9/34 (26%), Positives = 19/34 (55%)

Query: 88  RRPKRQRPVIDFSVKISNISPNTRVRDLKQALSE 121
           +RPK  +P+ DF + + N     R  D+ + +++
Sbjct: 327 QRPKPFKPITDFELAVPNFLKLQRGSDISKLVAK 360


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 9/34 (26%), Positives = 19/34 (55%)

Query: 88  RRPKRQRPVIDFSVKISNISPNTRVRDLKQALSE 121
           +RPK  +P+ DF + + N     R  D+ + +++
Sbjct: 326 QRPKPFKPITDFELAVPNFLKLQRGSDISKLVAK 359


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 152 AQMSLGGSGDGDAEDKPRLLAVEPAPPRQPH 182
           ++MS  G+G G+   + +     P P R P+
Sbjct: 94  SEMSSPGAGSGNLSPQIQTQVARPPPARSPY 124


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 152 AQMSLGGSGDGDAEDKPRLLAVEPAPPRQPH 182
           ++MS  G+G G+   + +     P P R P+
Sbjct: 94  SEMSSPGAGSGNLSPQIQTQVARPPPARSPY 124


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/46 (23%), Positives = 16/46 (34%)

Query: 58  KPGKPXXXXXXXXXXTKSAGKEPREGDAKPRRPKRQRPVIDFSVKI 103
           KPG P            S     R  D    +P  ++P  DF  ++
Sbjct: 228 KPGTPPSGEPGNGPLDLSVSSRKRSNDDSVSQPPNRKPRTDFKPQV 273


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 106 ISPNTRVRDLKQALSERGVKPQ 127
           ++PN RV+++    S R VKP+
Sbjct: 658 LTPNMRVQEVVIQFSNRIVKPR 679


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/34 (23%), Positives = 19/34 (55%)

Query: 88  RRPKRQRPVIDFSVKISNISPNTRVRDLKQALSE 121
           +RPK  +P+ DF + + +     R  D+ + +++
Sbjct: 327 QRPKPFKPITDFELAVPSFLKLQRGSDISKLVAK 360


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/34 (23%), Positives = 19/34 (55%)

Query: 88  RRPKRQRPVIDFSVKISNISPNTRVRDLKQALSE 121
           +RPK  +P+ DF + + +     R  D+ + +++
Sbjct: 327 QRPKPFKPITDFELAVPSFLKLQRGSDISKLVAK 360


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 13/46 (28%), Positives = 16/46 (34%)

Query: 10  LHAEGGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGE 55
           +  +  GYG G       E G+            G  LN  TTE E
Sbjct: 603 VQTDSSGYGLGAELYQIQEDGSRGVIAFASRSLRGPELNYTTTEKE 648


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 90  PKRQRPVIDFSVKISNISPNT 110
           PKR  P++   V +S  +P T
Sbjct: 80  PKRSSPILAEKVSVSPTTPPT 100


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 157 GGSGDGDAEDKPRLLAVEP 175
           G  GDG  E+K R   + P
Sbjct: 101 GDRGDGGGEEKKREFYIPP 119


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.308    0.129    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,432
Number of Sequences: 317
Number of extensions: 1384
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of query: 199
length of database: 114,650
effective HSP length: 54
effective length of query: 145
effective length of database: 97,532
effective search space: 14142140
effective search space used: 14142140
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.2 bits)
S2: 41 (20.6 bits)