GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002296-TA|BGIBMGA002296-PA|undefined
         (199 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    29   0.072
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            28   0.22 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.38 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.2  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   2.7  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   2.7  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   2.7  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   2.7  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   2.7  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 0.072
 Identities = 22/81 (27%), Positives = 27/81 (33%), Gaps = 2/81 (2%)

Query: 4   YQSRSRLHAEGG--GYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDGKPGK 61
           YQS       GG  GYG GG        G     R    + GGG   G      +G  G+
Sbjct: 49  YQSNDNGGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNGDGGR 108

Query: 62  PXXXXXXXXXXTKSAGKEPRE 82
           P           +    +PRE
Sbjct: 109 PAYSGNSDPSMDQVKTDKPRE 129


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 27.9 bits (59), Expect = 0.22
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 154 MSLGGSGDGDAEDKPRLLAVEPAPPRQP 181
           + LGGSG G     P ++   P PP+ P
Sbjct: 734 IGLGGSGAGGPSSSPPVMESIPPPPKPP 761


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.38
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 14  GGGYGCGGTHRAASEKGAATYARTEESQ--RGGGILNGNTTEGEDGKPGKP 62
           GGG G G    AA+ +  A  A  +E +   GGG   G    G  G  G P
Sbjct: 172 GGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGP 222


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)

Query: 152 AQMSLGGSGDGDAEDKP 168
           A M++GGS +GD  +KP
Sbjct: 75  ASMAMGGSFEGDCNEKP 91


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 121 ERGVKPQIMVWK-GEGDSGVSAVSMEGVLSALAQMSLGGSGDGDAEDKPRLLAVEPAP 177
           ++  + Q   W  G G S  + V+  G   A    + GG   G+   + RLL+ +PAP
Sbjct: 469 QQASQQQSQYWPHGSGGSSSAVVAPSG---ASVGNATGGQLAGELPGQQRLLSRQPAP 523


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 14/46 (30%), Positives = 18/46 (39%)

Query: 12  AEGGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDG 57
           A GGG   G     +SE  A   + T  +   GG     T+ G  G
Sbjct: 220 ASGGGGSGGSAGNFSSESNAQMDSTTNTTSNTGGTGGTGTSSGGGG 265


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 14/46 (30%), Positives = 18/46 (39%)

Query: 12  AEGGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDG 57
           A GGG   G     +SE  A   + T  +   GG     T+ G  G
Sbjct: 220 ASGGGGSGGSAGNFSSESNAQMDSTTNTTSNTGGTGGTGTSSGGGG 265


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 14/46 (30%), Positives = 18/46 (39%)

Query: 12  AEGGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDG 57
           A GGG   G     +SE  A   + T  +   GG     T+ G  G
Sbjct: 220 ASGGGGSGGSAGNFSSESNAQMDSTTNTTSNTGGTGGTGTSSGGGG 265


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 14/46 (30%), Positives = 18/46 (39%)

Query: 12  AEGGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDG 57
           A GGG   G     +SE  A   + T  +   GG     T+ G  G
Sbjct: 220 ASGGGGSGGSAGNFSSESNAQMDSTTNTTSNTGGTGGTGTSSGGGG 265


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.308    0.129    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,502
Number of Sequences: 2123
Number of extensions: 7225
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 11
length of query: 199
length of database: 516,269
effective HSP length: 61
effective length of query: 138
effective length of database: 386,766
effective search space: 53373708
effective search space used: 53373708
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 46 (22.6 bits)