Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002296-TA|BGIBMGA002296-PA|undefined
(199 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 33 0.18
Z49968-12|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 33 0.18
AC024753-10|AAF60454.1| 71|Caenorhabditis elegans Nematode spe... 31 0.42
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 31 0.74
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 31 0.74
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 31 0.74
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z11126-7|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 2.2
U27312-7|AAA68251.1| 71|Caenorhabditis elegans Hypothetical pr... 29 2.2
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 29 3.0
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 29 3.0
AF098504-2|AAN84807.1| 73|Caenorhabditis elegans Nematode spec... 29 3.0
Z81531-4|CAB04318.1| 285|Caenorhabditis elegans Hypothetical pr... 28 3.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 5.2
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 28 5.2
U80451-3|AAB37838.1| 71|Caenorhabditis elegans Hypothetical pr... 27 6.9
U50192-2|AAA91245.1| 71|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 27 6.9
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 27 9.1
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 27 9.1
AF036688-6|AAB88312.1| 71|Caenorhabditis elegans Hypothetical ... 27 9.1
AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical... 27 9.1
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 27 9.1
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 27 9.1
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 32.7 bits (71), Expect = 0.18
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 11 HAEGGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGN--TTEGEDGKPGKPXXXXXX 68
+ G G G S KG A ++ + G G NGN T +G+D K GK
Sbjct: 658 NGSGNGKEGDGNKSGGSGKGGAGNGKSGDGS-GDGKNNGNGGTGDGKD-KNGKGSGSGDN 715
Query: 69 XXXXTKSAGKEPREGDAK 86
T++AGK EG+ K
Sbjct: 716 DKSGTRAAGKGNAEGNGK 733
>Z49968-12|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 32.7 bits (71), Expect = 0.18
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 11 HAEGGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGN--TTEGEDGKPGKPXXXXXX 68
+ G G G S KG A ++ + G G NGN T +G+D K GK
Sbjct: 658 NGSGNGKEGDGNKSGGSGKGGAGNGKSGDGS-GDGKNNGNGGTGDGKD-KNGKGSGSGDN 715
Query: 69 XXXXTKSAGKEPREGDAK 86
T++AGK EG+ K
Sbjct: 716 DKSGTRAAGKGNAEGNGK 733
>AC024753-10|AAF60454.1| 71|Caenorhabditis elegans Nematode
specific peptide family,group d protein 8 protein.
Length = 71
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 15 GGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDG 57
GGYG G AS G YAR + +Q G G N N +G G
Sbjct: 11 GGYGSGYMGSNASSSG---YAREDYAQGGNGGSNNNQQQGSGG 50
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 5 QSRSRLHAEGGGYGCGGTHRAASEKGAATYARTEESQRGG 44
QS S+ HA GY G +A G A+ T E +RGG
Sbjct: 3061 QSMSQ-HATSAGYSSSGMESSAHNSGYASIRHTGERERGG 3099
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 5 QSRSRLHAEGGGYGCGGTHRAASEKGAATYARTEESQRGG 44
QS S+ HA GY G +A G A+ T E +RGG
Sbjct: 3645 QSMSQ-HATSAGYSSSGMESSAHNSGYASIRHTGERERGG 3683
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 5 QSRSRLHAEGGGYGCGGTHRAASEKGAATYARTEESQRGG 44
QS S+ HA GY G +A G A+ T E +RGG
Sbjct: 3061 QSMSQ-HATSAGYSSSGMESSAHNSGYASIRHTGERERGG 3099
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 5 QSRSRLHAEGGGYGCGGTHRAASEKGAATYARTEESQRGG 44
QS S+ HA GY G +A G A+ T E +RGG
Sbjct: 3645 QSMSQ-HATSAGYSSSGMESSAHNSGYASIRHTGERERGG 3683
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 5 QSRSRLHAEGGGYGCGGTHRAASEKGAATYARTEESQRGG 44
QS S+ HA GY G +A G A+ T E +RGG
Sbjct: 3645 QSMSQ-HATSAGYSSSGMESSAHNSGYASIRHTGERERGG 3683
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/74 (21%), Positives = 26/74 (35%)
Query: 12 AEGGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDGKPGKPXXXXXXXXX 71
+ GGGY GG ++ ++ + S GG G+++ G
Sbjct: 345 SSGGGYSGGGESSSSGGSSYSSGGDSSSSSGGGYSSGGDSSSSSSSSGGYSGGSDSSSSS 404
Query: 72 XTKSAGKEPREGDA 85
+ S G GDA
Sbjct: 405 SSSSGGYSSGGGDA 418
>Z11126-7|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/74 (21%), Positives = 26/74 (35%)
Query: 12 AEGGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDGKPGKPXXXXXXXXX 71
+ GGGY GG ++ ++ + S GG G+++ G
Sbjct: 345 SSGGGYSGGGESSSSGGSSYSSGGDSSSSSGGGYSSGGDSSSSSSSSGGYSGGSDSSSSS 404
Query: 72 XTKSAGKEPREGDA 85
+ S G GDA
Sbjct: 405 SSSSGGYSSGGGDA 418
>U27312-7|AAA68251.1| 71|Caenorhabditis elegans Hypothetical
protein F26A1.10 protein.
Length = 71
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 11 HAEGGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDGKPGKP 62
+ GGYG G AS G YAR + +Q G G +GN +G G P
Sbjct: 7 YMSAGGYGSGYMGANASSSG---YAREDYAQGGAG-GSGNQNQGGSGGNTNP 54
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 135 GDSGVSAVSMEGVLSALAQMSLGGSG----DGDAEDKPRLLAVEPAPPR 179
G+ SA SM S+ +QMS+G S D++ PR A P+ PR
Sbjct: 1775 GEESDSAASMRSAASSNSQMSMGSSSQQQQQQDSDMTPRDSAGTPSTPR 1823
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 28.7 bits (61), Expect = 3.0
Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 2/147 (1%)
Query: 14 GGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDGKPGKPXXXXXXXXXXT 73
GGG G HR + + Y + S G +G G G+ KP
Sbjct: 608 GGGGGHQKNHRKYDQSSSQRYQQQRRSSMSAGSESGGRGGGGGGQ--KPSSSRGSARGMR 665
Query: 74 KSAGKEPREGDAKPRRPKRQRPVIDFSVKISNISPNTRVRDLKQALSERGVKPQIMVWKG 133
G GD ++ + Q + + S+ S + ++++ + K +
Sbjct: 666 GGGGHRKSGGDDDRQQQQHQNSIAEKPEGSSSGSATEKSKEIEAKSKKDDTKKPLEPSAA 725
Query: 134 EGDSGVSAVSMEGVLSALAQMSLGGSG 160
D S+ + + S SG
Sbjct: 726 SSDPSSSSTTTTTITKEPPTQSASASG 752
>AF098504-2|AAN84807.1| 73|Caenorhabditis elegans Nematode
specific peptide family,group d protein 10 protein.
Length = 73
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 15 GGYGCGGTHRAASEKGAATYARTEESQ-RGGGILNGNTTEGEDGKPGKP 62
GGYG G AS G YAR + +Q +GG N N +G G P
Sbjct: 11 GGYGSGYMGSNASSSG---YAREDYAQGQGGQSNNNNNNQGGSGGNTNP 56
>Z81531-4|CAB04318.1| 285|Caenorhabditis elegans Hypothetical
protein F36D3.4 protein.
Length = 285
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 24 RAASEKGAATYAR--TEESQRGGGILNGNTTEGEDGKPGKPXXXXXXXXXXTKSAGKEPR 81
R S+KG+A+ + + +S+R G G+ GK GKP + + K+
Sbjct: 30 RKKSKKGSASKSSRASSKSRRSSKSNKGPGMFGKSGKSGKPSHGKSSKSKKSSKSEKKKL 89
Query: 82 EGDAKPRRPKRQR 94
++K + K +R
Sbjct: 90 RRESKDKSSKSKR 102
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 14 GGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDGKPGK 61
GGG G GG H AA G + G G G+DG+PG+
Sbjct: 117 GGGGGGGGCHCAAQASGCPAGPPGPPGEAGTDGEPGQA--GQDGQPGQ 162
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 41 QRGGGILNGNTTEGEDGKPGKP 62
++G L+G T +GEDG PG P
Sbjct: 257 EQGPPGLDGETIDGEDGSPGLP 278
>U80451-3|AAB37838.1| 71|Caenorhabditis elegans Hypothetical
protein F11G11.8 protein.
Length = 71
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 15 GGYGCGGTHRAASEKGAATYARTEESQ--RGGGILNGNTTEGEDGKPG 60
GGYG G AS G YAR + +Q GGG N G + PG
Sbjct: 11 GGYGSGYMGSNASSSG---YAREDYAQGGNGGGQQQQNQGSGGNTNPG 55
>U50192-2|AAA91245.1| 71|Caenorhabditis elegans Hypothetical
protein T23B7.1 protein.
Length = 71
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 15 GGYGCGGTHRAASEKGAATYARTEESQ--RGGGILNGNTTEGEDGKPG 60
GGYG G AS G YAR + +Q GGG N G + PG
Sbjct: 11 GGYGSGYMGSNASSSG---YAREDYAQGGNGGGQQQQNQGSGGNTNPG 55
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 3/112 (2%)
Query: 14 GGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDGKPGKPXXXXXXXXXXT 73
GGG G HR + + Y + S G +G G G+ KP
Sbjct: 104 GGGGGHQKNHRKYDQSSSQRYQQQRRSSMSAGSESGGRGGGGGGQ--KPSSSRGSARGMR 161
Query: 74 KSAGKEPREGDAKPRRPKRQRPVIDFSVKISNISPNTRVRDLKQALSERGVK 125
G GD ++ + Q + + S+ S + +++ +A S++ +K
Sbjct: 162 GGGGHRKSGGDDDRQQQQHQNSIAEKPEGSSSGSATEKSKEI-EAKSKKVLK 212
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 5 QSRSRLHAEGGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDGKPGKP 62
+SR R GGG G + E+ R E +RGG + E E KP +P
Sbjct: 76 RSRDRGERRGGGGGGDRDRSRSRERRRGGGGRDEPRRRGGDDEARSRREPEPQKPREP 133
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 14 GGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDGK 58
GGG G GG + ++ +R++ S RGGG + G + + K
Sbjct: 141 GGGGGGGGQNGGSTWNLKEKESRSKSSDRGGGGIYGTMRKKNEQK 185
>AF036688-6|AAB88312.1| 71|Caenorhabditis elegans Hypothetical
protein C24D10.7 protein.
Length = 71
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 15 GGYGCGGTHRAASEKGAATYARTEESQ--RGGGILNGNTTEGEDGKPG 60
GGYG G AS G YAR + +Q GGG N G + PG
Sbjct: 11 GGYGSGYMGSNASSSG---YAREDYAQGGNGGGGQQQNQGSGGNTNPG 55
>AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical
protein Y71G12B.11b protein.
Length = 996
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 14 GGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDGK 58
GGG G GG + ++ +R++ S RGGG + G + + K
Sbjct: 141 GGGGGGGGQNGGSTWNLKEKESRSKSSDRGGGGIYGTMRKKNEQK 185
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 14 GGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDGK 58
GGG G GG + ++ +R++ S RGGG + G + + K
Sbjct: 141 GGGGGGGGQNGGSTWNLKEKESRSKSSDRGGGGIYGTMRKKNEQK 185
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 5 QSRSRLHAEGGGYGCGGTHRAASEKGAATYARTEESQRGGGILNGNTTEGEDGKPGKP 62
+SR R GGG G + E+ R E +RGG + E E KP +P
Sbjct: 76 RSRDRGERRGGGGGGDRDRSRSRERRRGGGGRDEPRRRGGDDEARSRREPEPQKPREP 133
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.308 0.129 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,440,884
Number of Sequences: 27539
Number of extensions: 177561
Number of successful extensions: 677
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 617
Number of HSP's gapped (non-prelim): 71
length of query: 199
length of database: 12,573,161
effective HSP length: 78
effective length of query: 121
effective length of database: 10,425,119
effective search space: 1261439399
effective search space used: 1261439399
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -