Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002294-TA|BGIBMGA002294-PA|IPR000210|BTB, IPR003131|K+
channel tetramerisation, IPR001646|Pentapeptide repeat
(397 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0394 + 3073903-3073954,3074052-3074161,3074234-3074368,307... 144 1e-34
10_08_0144 - 15176059-15176112,15176375-15176455,15176711-151767... 114 1e-25
02_04_0590 - 24154366-24155742 50 2e-06
01_01_0290 - 2382821-2382872,2382993-2383053,2383340-2383400,238... 42 9e-04
04_04_0410 - 25010455-25011819 40 0.003
02_05_0105 + 25874155-25874495,25874586-25874615,25875327-258754... 39 0.006
10_08_0539 - 18631670-18631893,18632008-18632254,18633775-18634014 36 0.075
07_03_0093 + 13330867-13332312 36 0.075
05_04_0393 - 20895485-20895645,20895750-20896358,20896541-208966... 33 0.30
06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,641... 33 0.40
03_02_0750 + 10909130-10909616,10912257-10912916,10913139-109135... 33 0.40
01_05_0624 + 23772613-23774671,23774737-23775596 33 0.40
03_03_0274 - 16089322-16089365,16089604-16089616,16090367-160907... 32 0.70
06_01_1005 - 7810210-7810907,7811005-7811080,7811180-7811368,781... 32 0.92
02_01_0407 - 2963907-2964063,2965158-2965311,2965427-2968527,296... 31 1.2
12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551 31 2.1
12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660 31 2.1
10_07_0091 - 12774590-12774664,12774971-12775134,12775249-127753... 30 3.7
02_01_0423 - 3092863-3094959 30 3.7
01_01_0055 - 415666-415767,416510-416602,416776-416850,416920-41... 30 3.7
11_06_0132 - 20431122-20431477,20431739-20433758 29 6.5
02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657 29 6.5
12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 29 8.6
07_03_0833 - 21844123-21844929 29 8.6
06_03_1294 - 29080347-29081447 29 8.6
06_01_0725 + 5305839-5306279,5306816-5307028,5307229-5307675,530... 29 8.6
04_03_1040 - 21920659-21920856,21920943-21921110,21921173-21922012 29 8.6
>03_01_0394 +
3073903-3073954,3074052-3074161,3074234-3074368,
3074461-3074616,3074793-3074876,3075069-3075115,
3075305-3075378,3075634-3075692,3076149-3076208,
3076826-3076906,3077033-3077086
Length = 303
Score = 144 bits (348), Expect = 1e-34
Identities = 104/304 (34%), Positives = 155/304 (50%), Gaps = 25/304 (8%)
Query: 89 SEVSDWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDR 148
S S + LN+GG+ + T+ TL +EP SMLA MF+ + + P D+ G +DR
Sbjct: 7 SSSSSPVLLNIGGKRYATTVETLTQREPSSMLAAMFSGRHTL----PRHPDT-GMVFVDR 61
Query: 149 SPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGIDSMIPHIQKIIEDSKSYDSNHA- 207
++F +LN+LR G V + +L EA +Y + + I + + + A
Sbjct: 62 DGKHFRHVLNWLRDGAVPDMSESEYQQLLREAEYYQLLGLADCINDRLGWKNDENFSEAE 121
Query: 208 LTRMDVVRALIKTSTSIELRFQGVNLAGADLNRLDLRFINFKYAFLSRCNLSGANL---- 263
LTR DV++ + + +RF+GVNL+G DL++LDL ++F YA + N S A L
Sbjct: 122 LTRKDVIKCI----QAPRVRFRGVNLSGLDLSKLDLSEVDFSYACIKNANFSSAYLRKAK 177
Query: 264 -----SYCC------LERADLSHANLEGAQLLGVKALCANMEGANLKGCNMDDPHGNKAL 312
+ C L +L ANLEG+ L AN++ A LK C + A
Sbjct: 178 FRLTEATCSSFQSANLHECELIGANLEGSVLDKANLQSANLQDACLKQCCFIETDLRSAH 237
Query: 313 MEGVNLKGANLEGSNMSGVNLRVATLKNANLQNCDLRTAVLAGADLECCDLSGSDLHEAN 372
++G NL GANL G+N+ G NL+ A L NL+ +L+ A L DL L+G+ L AN
Sbjct: 238 LQGANLMGANLSGANLEGANLKGAKLAGTNLECANLQRAYLREVDLRETHLTGAKLGGAN 297
Query: 373 LRGA 376
L GA
Sbjct: 298 LLGA 301
>10_08_0144 -
15176059-15176112,15176375-15176455,15176711-15176770,
15177220-15177278,15177412-15177485,15177595-15177641,
15177852-15177935,15178051-15178212,15178264-15178467,
15178541-15178647,15178746-15178773
Length = 319
Score = 114 bits (274), Expect = 1e-25
Identities = 101/321 (31%), Positives = 152/321 (47%), Gaps = 47/321 (14%)
Query: 95 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPEYFE 154
I LN+GG + T+ TL ++P S+LA + L P+ D GA +DR E F
Sbjct: 5 ILLNIGGSRYETTADTLTQRDPGSLLAAALSGAAAHGL--PTTED--GAVFVDRDGELFR 60
Query: 155 PILNYLRHGEVIIDKYVNPRGVLEEAVFYGID---------------------SMIPHIQ 193
+LN+LR G V R +L EA +Y + +I I
Sbjct: 61 HVLNWLRDGAVPALADAEYRQLLREAEYYRLPVYEQCLLPPWLCVWGDFDPNAGLIDCIS 120
Query: 194 KIIED--SKSYDSNHA-LTRMDVVRALIKTSTSIELRFQGVNLAGADLNRLDLRFINFKY 250
+ IED K S+ A LTR DV++ + + ++RF+GVNL+G DL++LDL ++F
Sbjct: 121 ERIEDWDDKIGRSSEAELTRKDVIKCI----QADKVRFRGVNLSGLDLSKLDLSEVDFSC 176
Query: 251 AFLSRCNLSGANLSYCCL-----ERADLSHANLEGAQLLGVKALCANMEGANLKGCNMDD 305
+ S ANL R+ ++ANL + +G + ++ ANL+ N+ D
Sbjct: 177 GCIEETKFSLANLYKAKFREVQASRSSFNYANLRECEFVGANLQESTLDRANLQSANLQD 236
Query: 306 ----------PHGNKALMEGVNLKGANLEGSNMSGVNLRVATLKNANLQNCDLRTAVLAG 355
A ++ +L GANL G+N+ G NL+ A L +NLQ +L+ A L
Sbjct: 237 ACLVKCSFIETDLRSAHLQRADLTGANLTGANLEGANLKGAKLSGSNLQGANLQRAYLRE 296
Query: 356 ADLECCDLSGSDLHEANLRGA 376
DL L+G+ L ANL GA
Sbjct: 297 VDLRETQLTGAKLGGANLLGA 317
>02_04_0590 - 24154366-24155742
Length = 458
Score = 50.4 bits (115), Expect = 2e-06
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 95 ITLNVGGRYFTTSRSTLQSKEPLSMLARMF-ADDNNMYLMNPSATDSRGAYLIDRSPEYF 153
+ LNVGGR F T STL S +ML M A N+ + Y IDR PE F
Sbjct: 8 VRLNVGGRVFETMASTLASAGRDTMLGAMIDASWNHGGGGDGDGEGGADEYFIDRDPECF 67
Query: 154 EPILNYLRHGEVIIDKYVNPRGVLEEAVFYGI 185
+L+ LR G + + +V + EA++YG+
Sbjct: 68 AVLLDLLRTGGLHVPPHVADGVLCREALYYGL 99
>01_01_0290 -
2382821-2382872,2382993-2383053,2383340-2383400,
2383492-2383551,2383784-2383845,2383997-2384069,
2384261-2384527
Length = 211
Score = 41.9 bits (94), Expect = 9e-04
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 319 KGANLEGSNMSGVNLRVATLKNANLQNCDLRTAVLAGADLECCDLSGSDLHEANLRGAN 377
+G +L G + SG L K + L+ + + A L GA DL+G+DL +A+LRGA+
Sbjct: 68 RGQDLTGKDFSGQTLIRQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGAD 126
Score = 40.7 bits (91), Expect = 0.002
Identities = 32/102 (31%), Positives = 47/102 (46%)
Query: 229 QGVNLAGADLNRLDLRFINFKYAFLSRCNLSGANLSYCCLERADLSHANLEGAQLLGVKA 288
+G +L G D + L +FK + L + N GA L ADL+ A+L A L G
Sbjct: 68 RGQDLTGKDFSGQTLIRQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADF 127
Query: 289 LCANMEGANLKGCNMDDPHGNKALMEGVNLKGANLEGSNMSG 330
AN+ + + +A + VNL ANLEG+ +G
Sbjct: 128 SLANVSKKVIDHFLIKLLPVCQAWISQVNLTNANLEGALATG 169
Score = 39.1 bits (87), Expect = 0.006
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Query: 276 ANLEGAQLLGVKALCANMEGANLKGCNMDDPHGNKALMEGVNLKGANLEGSNMSGVNLRV 335
AN A L+ L A+ A KG P+G + + G +L G + G + + +
Sbjct: 35 ANAGAAALVAASLLVADPALA-FKG---GGPYGQQ-VTRGQDLTGKDFSGQTLIRQDFKT 89
Query: 336 ATLKNANLQNCDLRTAVLAGADLECCDLSGSDLHEANLRGANLKDAAFELMLTPL 390
+ L+ AN + L A ADL DLS +DL A+ AN+ + L L
Sbjct: 90 SILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVSKKVIDHFLIKL 144
Score = 29.9 bits (64), Expect = 3.7
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 213 VVRALIKTSTSIELRFQGVNLAGADLNRLDLRFINFKYAFLSRCNLSGANLSYCCLERAD 272
++R KTS + F+G L GA DL + A L + S AN+S ++
Sbjct: 82 LIRQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVSKKVIDHFL 141
Query: 273 LSHANLEGAQLLGVKALCANMEGANLKG 300
+ + A + V AN+EGA G
Sbjct: 142 IKLLPVCQAWISQVNLTNANLEGALATG 169
Score = 28.7 bits (61), Expect = 8.6
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 257 NLSGANLSYCCLERADLSHANLEGAQLLGVKALCANMEGA-----NLKGCNMDDPHGNKA 311
+ SG L + + L AN +GA+LLG A++ GA +L+G + + +K
Sbjct: 76 DFSGQTLIRQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVSKK 135
Query: 312 LMEGVNLKGANLEGSNMSGVNLRVATLKNA 341
+++ +K + + +S VNL A L+ A
Sbjct: 136 VIDHFLIKLLPVCQAWISQVNLTNANLEGA 165
>04_04_0410 - 25010455-25011819
Length = 454
Score = 39.9 bits (89), Expect = 0.003
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 95 ITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGA--------YLI 146
+ NVGG+ F T+ +TL + SML + N+ G Y I
Sbjct: 6 VRFNVGGQVFETTTTTLANAGRESMLGALLDSSWNLAPTAGGGGGGGGGGGGGGVAEYFI 65
Query: 147 DRSPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGI 185
DR+P F +L+ LR G + + + + + EA++YG+
Sbjct: 66 DRNPACFAVLLDLLRTGSLHVPPQLPEKLLYREALYYGL 104
>02_05_0105 +
25874155-25874495,25874586-25874615,25875327-25875433,
25875884-25875918,25876310-25876438,25877103-25877294
Length = 277
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 218 IKTSTSIELRFQGVNLAGADLNRLDLRFINFKYAFLS-----RCNLSGANLSYCCLERAD 272
+K + + F+ N AD+ + F A+L R N +GA+LS ++R
Sbjct: 113 LKKAVHVNENFRRANFTAADMRESNFSGSTFNGAYLEKAVAYRANFTGADLSDTLMDRMV 172
Query: 273 LSHANLEGAQLLGVKALCANMEGANLKGCNMDD 305
L+ ANL A L+ +++ GA ++G + D
Sbjct: 173 LNEANLTNAVLVRSVLTRSDLGGAIIEGADFSD 205
Score = 38.3 bits (85), Expect = 0.011
Identities = 28/101 (27%), Positives = 44/101 (43%)
Query: 271 ADLSHANLEGAQLLGVKALCANMEGANLKGCNMDDPHGNKALMEGVNLKGANLEGSNMSG 330
A A+L+ A + AN A+++ N N A +E AN G+++S
Sbjct: 106 AQFGSADLKKAVHVNENFRRANFTAADMRESNFSGSTFNGAYLEKAVAYRANFTGADLSD 165
Query: 331 VNLRVATLKNANLQNCDLRTAVLAGADLECCDLSGSDLHEA 371
+ L ANL N L +VL +DL + G+D +A
Sbjct: 166 TLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIEGADFSDA 206
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/69 (31%), Positives = 30/69 (43%)
Query: 310 KALMEGVNLKGANLEGSNMSGVNLRVATLKNANLQNCDLRTAVLAGADLECCDLSGSDLH 369
KA+ N + AN ++M N +T A L+ A GADL + L+
Sbjct: 115 KAVHVNENFRRANFTAADMRESNFSGSTFNGAYLEKAVAYRANFTGADLSDTLMDRMVLN 174
Query: 370 EANLRGANL 378
EANL A L
Sbjct: 175 EANLTNAVL 183
Score = 29.5 bits (63), Expect = 4.9
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 257 NLSGANLSYCCLERADLSHANLEGAQLLGVKALCANMEGANLKGCNMDDPHGNKALMEGV 316
N AN + + ++ S + GA L A AN GA+L MD N+A +
Sbjct: 122 NFRRANFTAADMRESNFSGSTFNGAYLEKAVAYRANFTGADLSDTLMDRMVLNEANLTNA 181
Query: 317 NLKGANLEGSNMSGVNLRVATLKNA 341
L + L S++ G + A +A
Sbjct: 182 VLVRSVLTRSDLGGAIIEGADFSDA 206
>10_08_0539 - 18631670-18631893,18632008-18632254,18633775-18634014
Length = 236
Score = 35.5 bits (78), Expect = 0.075
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 241 LDLRFINFKYAFLSRCNLSGANLSYCCLERADLSHANLEGAQLLGVKALCANMEGANLKG 300
LDLRF ++ + NL G +L+ A +S + +GA + V A GA+ KG
Sbjct: 112 LDLRFCDYTN---EKTNLKGKSLA-----AALMSDSKFDGADMSEVVMSKAYAVGASFKG 163
Query: 301 CNMDDPHGNKALMEGVNLKGANLEGSNMSGVNLRVATLKNANLQNCDLRTAVLAGADLE 359
+ A+++ VN + A+L+G+ L +T +A +Q+ ++ DL+
Sbjct: 164 TDF-----TNAVIDRVNFEKADLQGAIFRNTVLSGSTFDDAKMQDVVFEDTIIGYIDLQ 217
Score = 30.3 bits (65), Expect = 2.8
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 314 EGVNLKGANL----------EGSNMSGVNLRVATLKNANLQNCDLRTAVLAGADLECCDL 363
E NLKG +L +G++MS V + A A+ + D AV+ + E DL
Sbjct: 122 EKTNLKGKSLAAALMSDSKFDGADMSEVVMSKAYAVGASFKGTDFTNAVIDRVNFEKADL 181
Query: 364 SGSDLHEANLRGANLKDAAFE 384
G+ L G+ DA +
Sbjct: 182 QGAIFRNTVLSGSTFDDAKMQ 202
Score = 29.5 bits (63), Expect = 4.9
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Query: 292 NMEGANLKGCNMDDPHGNKALMEGVNLKGANLEGSNMSGVNLRVATLKNANLQNCDLRTA 351
N++G +L M D + A M V + A G++ G + A + N + DL+ A
Sbjct: 125 NLKGKSLAAALMSDSKFDGADMSEVVMSKAYAVGASFKGTDFTNAVIDRVNFEKADLQGA 184
Query: 352 VLAGADLECCDLSGSDLHEANLRGANLKDAAFE 384
+ L SGS +A ++ D FE
Sbjct: 185 IFRNTVL-----SGSTFDDAKMQ-----DVVFE 207
>07_03_0093 + 13330867-13332312
Length = 481
Score = 35.5 bits (78), Expect = 0.075
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 92 SDWITLNVGGRYFTTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGAYLIDRSPE 151
S +TLNVGG F T+ +TL S LA + + T + + +DR P
Sbjct: 3 SSVVTLNVGGEVFQTTVATLSRAGASSPLASL------------APTPASAPHFLDRDPR 50
Query: 152 YFEPILNYLRHGEVI---IDKYVNPRGVLEEAVFYGIDSMI 189
F +L++LR G + D +L EA +G++ +
Sbjct: 51 LFATLLSFLRRGRLAPTSPDSDPPSPALLAEARHFGVEGAL 91
>05_04_0393 -
20895485-20895645,20895750-20896358,20896541-20896616,
20896729-20896920,20897118-20897438,20897880-20898119,
20898205-20898522,20898621-20898678,20898778-20898936,
20900090-20900308,20900400-20900614
Length = 855
Score = 33.5 bits (73), Expect = 0.30
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 9 SHKKQNGKVLVVEDTLEAFKLEISNVFEIGGDFRLF-TENGCEIVDVRVIRDDEKLYV 65
+ + GK++ + T+E F++ I ++ L + G EI + VIRD++KL++
Sbjct: 780 NRSSEAGKLINLPGTMEEFRIIIEEKLKVDARKTLIMNDEGAEIDSIDVIRDNDKLFI 837
>06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,
6412568-6412695,6412855-6412971,6414936-6415475,
6415554-6417344,6418359-6421407,6421765-6421823,
6422738-6422791
Length = 1978
Score = 33.1 bits (72), Expect = 0.40
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 307 HGNKALMEGVNLKGANLEGSNMSGVNLRVATLKNANLQNCDLRTAVLAGADLECCDLSGS 366
H +++ NL N G N+S + + + +N N RTAV++G + L+
Sbjct: 963 HSLVSMIHMTNLPSENGSGENISDIKISRHSKENNNSDETVCRTAVISGNMIPLWLLAVF 1022
Query: 367 DLHEANLRGANLKDAAFELML 387
H++ R L+ A E+++
Sbjct: 1023 ARHDSKTRAEILEAGAVEMLM 1043
>03_02_0750 +
10909130-10909616,10912257-10912916,10913139-10913544,
10914376-10914757,10914918-10915679,10916106-10916165,
10916695-10917105
Length = 1055
Score = 33.1 bits (72), Expect = 0.40
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 307 HGNKALMEGVNLKGANLEGSNMSGVNLRVATLKNANLQNCDLRTAVLAGADLECCDLSGS 366
H +++ NL N G N+S + + + +N N RTAV++G + L+
Sbjct: 808 HSLVSMIHMTNLPSENGSGENISDIKISRHSKENNNSDETVCRTAVISGNMIPLWLLAVF 867
Query: 367 DLHEANLRGANLKDAAFELML 387
H++ R L+ A E+++
Sbjct: 868 ARHDSKTRAEILEAGAVEMLM 888
>01_05_0624 + 23772613-23774671,23774737-23775596
Length = 972
Score = 33.1 bits (72), Expect = 0.40
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 268 LERADLSHANLEGAQLLGVKALCANMEGANLKGCNMD----DPHGNKALMEGVNLKGANL 323
LE DLS L G + ++ NL C + D GN L+EG+NL G +
Sbjct: 262 LETLDLSENTLFGTVIPNWVWSMKTVKMLNLASCQLSGSFPDGLGNLTLLEGLNLGGDSY 321
Query: 324 EGSNMSGVNLRVATLKNANLQNCDLRTAVL 353
GSN S +TL N C+LR L
Sbjct: 322 HGSN-SFEGTLPSTLNN----TCNLRVLYL 346
>03_03_0274 -
16089322-16089365,16089604-16089616,16090367-16090714,
16090771-16090974,16091403-16091504,16091710-16091741,
16092668-16093655,16094461-16094711,16095786-16097795,
16097903-16097954
Length = 1347
Score = 32.3 bits (70), Expect = 0.70
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 8/136 (5%)
Query: 239 NRLDLRFINFKYAFLSRCNLSGANLSYCCLERADLSHANLEGAQLLGVKALCANMEGANL 298
N L L+++N Y +S L ++L+ L+ D+S EG A+C N+ NL
Sbjct: 116 NCLHLQYLNLSYNLISGI-LDVSSLAN--LQTLDVSQNRFEGGISANFPAICRNLSAINL 172
Query: 299 KGCNMDDP----HGNKALMEGVNLKGANLEGSNMSGV-NLRVATLKNANLQNCDLRTAVL 353
N+ N ++ V+L + G+ +G+ LR N
Sbjct: 173 SSNNLTGSISGLFNNCLKLQDVDLSWNSFTGNVWNGIARLRQFKAGKNNFAGSISSRIFS 232
Query: 354 AGADLECCDLSGSDLH 369
G L+ DLS + +
Sbjct: 233 TGCKLQLLDLSSNHFY 248
>06_01_1005 -
7810210-7810907,7811005-7811080,7811180-7811368,
7811507-7811728,7811906-7812004,7812112-7812192,
7812384-7812679,7812777-7813116,7813221-7813284,
7813511-7813735,7816958-7817244
Length = 858
Score = 31.9 bits (69), Expect = 0.92
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 11 KKQNGKVLVVEDTLEAFKLEISNVFEIGGD---FRLFTENGCEIVDVRVIRDDEKLYVNC 67
+++ G V+ + T+E + G RL E+G ++DV ++ D +KLY+
Sbjct: 786 RRREGVVVWIPHTIEGLVSSAQEKLGLAGSGEGLRLLGEDGARVLDVDMVHDGQKLYLVV 845
Query: 68 G 68
G
Sbjct: 846 G 846
>02_01_0407 -
2963907-2964063,2965158-2965311,2965427-2968527,
2968684-2968697
Length = 1141
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 204 SNHALTRMDVVRALIKTSTSIELRFQGVNLAGADLNRLDL--RFINFKYAFLSRCNLSGA 261
SN++LT + ++K S S+ GVN G + + F N ++ + C+L G
Sbjct: 403 SNNSLTNITDTLQILKNSRSLSTLLMGVNFNGELMPEDETIDGFENLQFVSIDDCSLIG- 461
Query: 262 NLSYCCLERADLSHANLEGAQLLG 285
N+ + + +L +L QL G
Sbjct: 462 NIPFWLSKLTNLQMLDLSNNQLTG 485
>12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551
Length = 475
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 247 NFKYAFLSRCNLSGANLSYCCLERADLSHANLEGAQLLGVKALCANMEGANLKGCNMDDP 306
N+ Y R NL GA +++C + + +ANL G + A +M GC +
Sbjct: 102 NYTYMDAVRANLGGAKVTFCGV----IQYANLVGVAIGYTIASSISMRAIRRAGCFHHNG 157
Query: 307 HGN 309
HG+
Sbjct: 158 HGD 160
>12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660
Length = 475
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 247 NFKYAFLSRCNLSGANLSYCCLERADLSHANLEGAQLLGVKALCANMEGANLKGCNMDDP 306
N+ Y R NL GA +++C + + +ANL G + A +M GC +
Sbjct: 102 NYTYMDAVRANLGGAKVTFCGV----IQYANLVGVAIGYTIASSISMRAIRRAGCFHHNG 157
Query: 307 HGN 309
HG+
Sbjct: 158 HGD 160
>10_07_0091 -
12774590-12774664,12774971-12775134,12775249-12775382,
12775463-12775556,12775650-12775758,12776055-12776103,
12778336-12778376,12779539-12779571,12779665-12779754,
12780474-12780507,12781218-12781510,12781859-12782057,
12782129-12782289,12783130-12783282,12783545-12783715,
12783822-12783921,12784023-12784111,12784192-12784290,
12784406-12784676,12784764-12784961,12785041-12785140,
12785799-12785931,12786016-12786277,12787106-12787155
Length = 1033
Score = 29.9 bits (64), Expect = 3.7
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query: 262 NLSYCCLERADLSHANLEGAQLLGV-KALCANMEGANLKGCNMDDPHGNKALMEGVNLKG 320
+LS L + + + +L G + + + K C N++ NL GC+ H +A V L+
Sbjct: 492 SLSTVELNSSSMVNLSLAGCRSMTLLKLSCPNLQNVNLDGCD----HLERASFCPVGLES 547
Query: 321 ANLE-GSNMSGVNLRVATLKNANLQNCDLRTAVLAGADLECCDLSGSD 367
NL +S +++ + L+ C VL+ A + C L+ D
Sbjct: 548 LNLGICPKLSDLHIEAPKMSLLELKGC----GVLSQASINCPRLTSLD 591
>02_01_0423 - 3092863-3094959
Length = 698
Score = 29.9 bits (64), Expect = 3.7
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 268 LERADLSHANLEGAQLLGVKALCANMEGANLKGCNMDDPHGNKALMEGVNLKGANLEGSN 327
LE+ L++ ++ G +L C N++ NL G N GN NL+ +L +N
Sbjct: 287 LEKLHLAYNSMSG-ELPSTVGNCRNLKNMNLGGNNFSGDLGNVNFSTLRNLQSLDLMSNN 345
Query: 328 MSG 330
+G
Sbjct: 346 FTG 348
>01_01_0055 -
415666-415767,416510-416602,416776-416850,416920-417071,
417147-417267,417567-418289,418408-418489,418575-418681,
418757-418822,418941-419057,419157-419402
Length = 627
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 139 DSRGAYLIDRSPEYFEPILNYLRHGEVIIDKYVNPRGVLEEAVFYGIDSMIPHI 192
++RGAY PE F I +Y G + + NPR V E + S IPH+
Sbjct: 552 ENRGAY-----PEEFGVIASYKGQGRIAQPGFKNPRWVDGELLVLNGKSTIPHL 600
>11_06_0132 - 20431122-20431477,20431739-20433758
Length = 791
Score = 29.1 bits (62), Expect = 6.5
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 311 ALMEGVNLKGANLEGSNMSGVNLRVATLKNANLQNCDLRTAVLAG 355
+L EG+NL NLEGS + ++ LK NL N D R+ L+G
Sbjct: 275 SLSEGLNLSNNNLEGS----IPQQIGNLK--NLVNLDARSNKLSG 313
>02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657
Length = 1136
Score = 29.1 bits (62), Expect = 6.5
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 261 ANLSYCCLERADLSHANLEG---AQLLGVKALCANM-EGANLKGCNMDDPHGNKALMEGV 316
+NLS C LE DLS+ +L G QL + L +NM G N + GN +
Sbjct: 585 SNLSSCPLELLDLSYNSLTGLIPKQLFLISTLSSNMFLGHNFLSGALPAEMGNLKNLGEF 644
Query: 317 NLKGANLEGSNMSGVNLRVATLKNANLQNCDLRTAVLAGADLECCDLSGSDLHEANLRG 375
+ N+ G + + +L+ N+ L+ ++ + + L DL + NL G
Sbjct: 645 DFSSNNISGEIPTSIG-ECKSLQQLNISGNSLQ-GIIPSSLGQLKGLLVLDLSDNNLSG 701
>12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653,
24963146-24963943,24964140-24964422,24964500-24964951,
24965744-24965870,24965950-24966074,24966188-24966858,
24966976-24967093,24967177-24967293,24967564-24967658,
24968152-24968303,24968858-24968913,24969001-24969218,
24969842-24970239,24970345-24970628,24970730-24970836,
24970882-24970968,24971729-24971990,24972228-24972503,
24973197-24973254,24973437-24973756,24973889-24973999,
24974183-24974350,24974494-24974622,24974731-24974820,
24974934-24975040,24975133-24975281,24975584-24975666,
24975749-24975844,24975957-24976079,24976180-24976263,
24976371-24976511,24976652-24976951,24977386-24977453,
24977540-24977642,24979363-24979524,24979613-24981230,
24981270-24981661,24981689-24981991,24982078-24982161,
24982296-24982448,24982678-24982841,24982915-24983062,
24983209-24983331,24983409-24983496,24983686-24983867
Length = 4177
Score = 28.7 bits (61), Expect = 8.6
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 309 NKALMEGVNLKGANLEGSNMSGVNLRVATLKNANLQNCDLRTAVLAGADLECCDLSGSDL 368
N+A ++ +GA + + + V T AN +C G+ +E DL GS L
Sbjct: 3630 NRAGLKSYCARGARMSSDELDALESSVPTSVPANDHSCSFLNECSIGSRIENSDL-GSQL 3688
Query: 369 HEANL 373
+ NL
Sbjct: 3689 DKLNL 3693
>07_03_0833 - 21844123-21844929
Length = 268
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 156 ILNYLRHGEVIIDKYVNPRGVLEEAVFYGIDSMIP 190
+ NYLR G+ +I +V P VL A + +D +P
Sbjct: 76 VANYLRPGDAVILLHVRPTSVLYGADWGSVDLSLP 110
>06_03_1294 - 29080347-29081447
Length = 366
Score = 28.7 bits (61), Expect = 8.6
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 105 TTSRSTLQSKEPLSMLARMFADDNNMYLMNPSATDSRGA 143
+T+ + QSK PL++L + + N +L +PS +RGA
Sbjct: 9 STTSCSKQSKLPLALLT-LECNSNKCFLFDPSTKQTRGA 46
>06_01_0725 +
5305839-5306279,5306816-5307028,5307229-5307675,
5307768-5307917,5308185-5308486,5309718-5309758,
5311294-5311968,5312343-5312386
Length = 770
Score = 28.7 bits (61), Expect = 8.6
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 268 LERADLSHANLEGAQLLGVKALCANMEGANLKGCNMDDPH--GNKALMEGVNLKGANLEG 325
L++ L + L G+ + C+N+E ++ CN++D + AL + L+ AN E
Sbjct: 239 LKKLSLHLVQVIAKDLQGLLSSCSNLEWLSIVRCNLNDDELKVDCALSRLLYLRIANCE- 297
Query: 326 SNMSGVNLRVATLKNANLQNCDLRTAVLAGADLECCDL 363
+S + + LK + L + +LE D+
Sbjct: 298 --ISKIEMYALKLKTFIYEGAQLPVDPIQAQELEVADI 333
>04_03_1040 - 21920659-21920856,21920943-21921110,21921173-21922012
Length = 401
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 260 GANLSYCCLERADLSHANLEGAQLLGVKALCANMEGANLKGC 301
G + S L+R LS+ ++ + ++C ++E NLKGC
Sbjct: 138 GLSCSSWSLKRLHLSNICVDDLFAKHISSMCCSLEDLNLKGC 179
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.135 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,709,752
Number of Sequences: 37544
Number of extensions: 440187
Number of successful extensions: 1175
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1033
Number of HSP's gapped (non-prelim): 67
length of query: 397
length of database: 14,793,348
effective HSP length: 84
effective length of query: 313
effective length of database: 11,639,652
effective search space: 3643211076
effective search space used: 3643211076
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -