GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002293-TA|BGIBMGA002293-PA|undefined
         (504 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    27   0.89 
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    27   0.89 
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    27   0.89 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   8.3  

>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 27.5 bits (58), Expect = 0.89
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 25  YVFVSYLFLEIRYTRENKNLTRPILRYVVVHLDLKGSPPSLNYLEDLLPVLKKHGANG 82
           YVF   L   + YT + K+ +R I+RY       K   P+ N      P   KH A+G
Sbjct: 606 YVFGEPLNPTLGYTEDEKDFSRKIMRYWSNF--AKTGNPNPNTASSEFPEWPKHTAHG 661


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 27.5 bits (58), Expect = 0.89
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 25  YVFVSYLFLEIRYTRENKNLTRPILRYVVVHLDLKGSPPSLNYLEDLLPVLKKHGANG 82
           YVF   L   + YT + K+ +R I+RY       K   P+ N      P   KH A+G
Sbjct: 606 YVFGEPLNPTLGYTEDEKDFSRKIMRYWSNF--AKTGNPNPNTASSEFPEWPKHTAHG 661


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 27.5 bits (58), Expect = 0.89
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 25  YVFVSYLFLEIRYTRENKNLTRPILRYVVVHLDLKGSPPSLNYLEDLLPVLKKHGANG 82
           YVF   L   + YT + K+ +R I+RY       K   P+ N      P   KH A+G
Sbjct: 492 YVFGEPLNPTLGYTEDEKDFSRKIMRYWSNF--AKTGNPNPNTASSEFPEWPKHTAHG 547


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 438  DVERKLLVVMSQYYGNDTIEEYINAKMLHLKRKLEGSMKIFKDLMGIRAFETSLKHLK 495
            ++E   L +   + G+ +I++ I A     KR+ EG MK  +    ++  ET L+  K
Sbjct: 971  ELEEMKLAIEKAHEGSSSIKKEIVALQ---KREAEGKMKRLEFEQILQTIETKLQETK 1025


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.141    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,889
Number of Sequences: 2123
Number of extensions: 22302
Number of successful extensions: 69
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 66
Number of HSP's gapped (non-prelim): 5
length of query: 504
length of database: 516,269
effective HSP length: 67
effective length of query: 437
effective length of database: 374,028
effective search space: 163450236
effective search space used: 163450236
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 50 (24.2 bits)