Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002293-TA|BGIBMGA002293-PA|undefined
(504 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074405-1|BAB85072.1| 478|Homo sapiens protein ( Homo sapiens ... 134 5e-31
BC018205-1|AAH18205.2| 394|Homo sapiens HEXDC protein protein. 91 6e-18
BC035561-1|AAH35561.1| 493|Homo sapiens hexosaminidase (glycosy... 91 8e-18
AL731551-1|CAI40246.1| 3623|Homo sapiens cubilin (intrinsic fact... 32 5.4
AL596445-1|CAH72450.1| 3623|Homo sapiens cubilin (intrinsic fact... 32 5.4
AL365215-1|CAH73630.1| 3623|Homo sapiens cubilin (intrinsic fact... 32 5.4
AF243129-1|AAK61830.1| 3494|Homo sapiens intrinsic factor-vitami... 32 5.4
AF034611-1|AAC82612.1| 3623|Homo sapiens intrinsic factor-B12 re... 32 5.4
AB209880-1|BAD93117.1| 1327|Homo sapiens cubilin variant protein. 32 5.4
>AK074405-1|BAB85072.1| 478|Homo sapiens protein ( Homo sapiens
cDNA FLJ23825 fis, clone HUV00659. ).
Length = 478
Score = 134 bits (325), Expect = 5e-31
Identities = 64/126 (50%), Positives = 87/126 (69%)
Query: 53 VVHLDLKGSPPSLNYLEDLLPVLKKHGANGLLVEYEDMFPYEGRLVNLRAKNCYDKIELQ 112
+VHLDLKG+PP ++YL ++ P+ + GANGLL+EYEDMFPYEG L LRAK Y E++
Sbjct: 3 LVHLDLKGAPPKVSYLSEIFPLFRALGANGLLIEYEDMFPYEGPLRLLRAKYAYSPSEIK 62
Query: 113 RFLRGAIELGFEIIPLIQTFGHMEFVLKQKEFYHLREDPTYPDSICPTKIESQMLIKEML 172
L A E+IPL+QTFGHMEFVLK F HLRE ++P ++ P + ES L+ M+
Sbjct: 63 EILHLAGLNELEVIPLVQTFGHMEFVLKHTAFAHLREVGSFPCTLNPHEAESLALVGAMI 122
Query: 173 IQIKQI 178
Q+ ++
Sbjct: 123 DQVLEL 128
Score = 91.5 bits (217), Expect = 6e-18
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 184 PETTVLIWDDMFRSIKLKSWNEIGYFNKIQTVYWDYGANSSVSHVNLL--KYHR-KFDNI 240
P T L+WDDM R + G ++ V WDY A+ V LL KY R F +
Sbjct: 182 PSVTPLVWDDMLRDLPEDQLAASGVPQLVEPVLWDYTADLDVHGKVLLMQKYRRCGFPQL 241
Query: 241 WIATAFKGADGRLSTIPNLKNRFLNHLSWLKLIANYKFGGETNFHSFVGIILTGWSRYSH 300
W A+AFKGA G +P +++ NH+ WL++ + G T+ S GIILTGW RY H
Sbjct: 242 WAASAFKGATGPSQAVPPVEHHLRNHVQWLQVAGS----GPTD--SLQGIILTGWQRYDH 295
Query: 301 FDPLCE 306
+ LCE
Sbjct: 296 YSVLCE 301
>BC018205-1|AAH18205.2| 394|Homo sapiens HEXDC protein protein.
Length = 394
Score = 91.5 bits (217), Expect = 6e-18
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 184 PETTVLIWDDMFRSIKLKSWNEIGYFNKIQTVYWDYGANSSVSHVNLL--KYHR-KFDNI 240
P T L+WDDM R + G ++ V WDY A+ V LL KY R F +
Sbjct: 98 PSVTPLVWDDMLRDLPEDQLAASGVPQLVEPVLWDYTADLDVHGKVLLMQKYRRCGFPQL 157
Query: 241 WIATAFKGADGRLSTIPNLKNRFLNHLSWLKLIANYKFGGETNFHSFVGIILTGWSRYSH 300
W A+AFKGA G +P +++ NH+ WL++ + G T+ S GIILTGW RY H
Sbjct: 158 WAASAFKGATGPSQAVPPVEHHLRNHVQWLQVAGS----GPTD--SLQGIILTGWQRYDH 211
Query: 301 FDPLCE 306
+ LCE
Sbjct: 212 YSVLCE 217
Score = 38.3 bits (85), Expect = 0.063
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 135 MEFVLKQKEFYHLREDPTYPDSICPTKIESQMLIKEMLIQIKQI 178
MEFVLK F HLRE ++P ++ P + ES L+ M+ Q+ ++
Sbjct: 1 MEFVLKHTAFAHLREVGSFPCTLNPHEAESLALVGAMIDQVLEL 44
>BC035561-1|AAH35561.1| 493|Homo sapiens hexosaminidase (glycosyl
hydrolase family 20, catalytic domain) containing
protein.
Length = 493
Score = 91.1 bits (216), Expect = 8e-18
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 184 PETTVLIWDDMFRSIKLKSWNEIGYFNKIQTVYWDYGANSSVSHVNLL--KYHR-KFDNI 240
P T L+WDDM R + G ++ V WDY A+ V LL KY R F +
Sbjct: 98 PSVTPLVWDDMLRDLPEDQLAASGVPQLVEPVLWDYTADLDVYGKVLLMQKYRRCGFPQL 157
Query: 241 WIATAFKGADGRLSTIPNLKNRFLNHLSWLKLIANYKFGGETNFHSFVGIILTGWSRYSH 300
W A+AFKGA G +P +++ NH+ WL++ + G T+ S GIILTGW RY H
Sbjct: 158 WAASAFKGATGPSQAVPPVEHHLRNHVQWLQVAGS----GPTD--SLQGIILTGWQRYDH 211
Query: 301 FDPLCE 306
+ LCE
Sbjct: 212 YSVLCE 217
Score = 38.3 bits (85), Expect = 0.063
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 135 MEFVLKQKEFYHLREDPTYPDSICPTKIESQMLIKEMLIQIKQI 178
MEFVLK F HLRE ++P ++ P + ES L+ M+ Q+ ++
Sbjct: 1 MEFVLKHTAFAHLREVGSFPCTLNPHEAESLALVGAMIDQVLEL 44
>AL731551-1|CAI40246.1| 3623|Homo sapiens cubilin (intrinsic
factor-cobalamin receptor) protein.
Length = 3623
Score = 31.9 bits (69), Expect = 5.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 348 YLQTDFSDSLHCVIHDIEKTNYSPCIFDGCELY 380
Y++TD S+ IHD + +S C FD E+Y
Sbjct: 1420 YIRTDPGSSIQLTIHDFDVEYHSRCNFDVLEIY 1452
>AL596445-1|CAH72450.1| 3623|Homo sapiens cubilin (intrinsic
factor-cobalamin receptor) protein.
Length = 3623
Score = 31.9 bits (69), Expect = 5.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 348 YLQTDFSDSLHCVIHDIEKTNYSPCIFDGCELY 380
Y++TD S+ IHD + +S C FD E+Y
Sbjct: 1420 YIRTDPGSSIQLTIHDFDVEYHSRCNFDVLEIY 1452
>AL365215-1|CAH73630.1| 3623|Homo sapiens cubilin (intrinsic
factor-cobalamin receptor) protein.
Length = 3623
Score = 31.9 bits (69), Expect = 5.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 348 YLQTDFSDSLHCVIHDIEKTNYSPCIFDGCELY 380
Y++TD S+ IHD + +S C FD E+Y
Sbjct: 1420 YIRTDPGSSIQLTIHDFDVEYHSRCNFDVLEIY 1452
>AF243129-1|AAK61830.1| 3494|Homo sapiens intrinsic factor-vitamin B12
receptor protein.
Length = 3494
Score = 31.9 bits (69), Expect = 5.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 348 YLQTDFSDSLHCVIHDIEKTNYSPCIFDGCELY 380
Y++TD S+ IHD + +S C FD E+Y
Sbjct: 1291 YIRTDPGSSIQLTIHDFDVEYHSRCNFDVLEIY 1323
>AF034611-1|AAC82612.1| 3623|Homo sapiens intrinsic factor-B12
receptor precursor protein.
Length = 3623
Score = 31.9 bits (69), Expect = 5.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 348 YLQTDFSDSLHCVIHDIEKTNYSPCIFDGCELY 380
Y++TD S+ IHD + +S C FD E+Y
Sbjct: 1420 YIRTDPGSSIQLTIHDFDVEYHSRCNFDVLEIY 1452
>AB209880-1|BAD93117.1| 1327|Homo sapiens cubilin variant protein.
Length = 1327
Score = 31.9 bits (69), Expect = 5.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 348 YLQTDFSDSLHCVIHDIEKTNYSPCIFDGCELY 380
Y++TD S+ IHD + +S C FD E+Y
Sbjct: 126 YIRTDPGSSIQLTIHDFDVEYHSRCNFDVLEIY 158
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.324 0.141 0.428
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,844,415
Number of Sequences: 224733
Number of extensions: 3078149
Number of successful extensions: 5004
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4986
Number of HSP's gapped (non-prelim): 12
length of query: 504
length of database: 73,234,838
effective HSP length: 93
effective length of query: 411
effective length of database: 52,334,669
effective search space: 21509548959
effective search space used: 21509548959
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 67 (31.1 bits)
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