Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002292-TA|BGIBMGA002292-PA|IPR006578|MADF
(230 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36653| Best HMM Match : ACBP (HMM E-Value=3.6) 42 4e-04
SB_25596| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_15897| Best HMM Match : DUF134 (HMM E-Value=7.5) 36 0.037
SB_6476| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_48325| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_29240| Best HMM Match : IncA (HMM E-Value=0.17) 29 2.4
SB_52503| Best HMM Match : zf-CCHC (HMM E-Value=2.6) 29 3.2
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 29 3.2
SB_22280| Best HMM Match : CagA (HMM E-Value=3.3) 29 4.3
SB_9532| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_58863| Best HMM Match : Fibrinogen_BP (HMM E-Value=2) 29 4.3
SB_45772| Best HMM Match : DUF1261 (HMM E-Value=5.1) 29 4.3
SB_41898| Best HMM Match : EGF_CA (HMM E-Value=3.9e-14) 29 4.3
SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_31663| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_19118| Best HMM Match : MutS_II (HMM E-Value=4) 29 4.3
SB_10203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_55887| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_51990| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 28 7.4
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 28 7.4
SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4) 28 7.4
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 28 7.4
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 27 9.8
SB_27347| Best HMM Match : TPR_1 (HMM E-Value=0) 27 9.8
SB_25279| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_5627| Best HMM Match : 7tm_1 (HMM E-Value=8.4e-16) 27 9.8
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_50860| Best HMM Match : TPR_1 (HMM E-Value=0) 27 9.8
>SB_36653| Best HMM Match : ACBP (HMM E-Value=3.6)
Length = 206
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 6 LIECVKDHVYLYDIKHKDYKNIALKTAVWEAIAKELHQTCDTVKLKWKTIRDGYIKYKKQ 65
L E V+ LYD KD+K+ K W+ +A++ + D K K+ +R+ Y K K +
Sbjct: 21 LAEAVRAFPVLYDKSIKDFKDKNKKENAWKQVAEQAGCSVDEAKRKFLNLRNRYSKDKNK 80
Query: 66 VKDSAFNGKKINDYI 80
+K + +G D +
Sbjct: 81 IKSKSKSGGATADVL 95
>SB_25596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 6 LIECVKDHVYLYDIKHKDYKNIALKTAVWEAIAKELHQTCDTVKLKWKTIRDGYIKYKKQ 65
+ E V+ LYD KD+K+ K W+ +A++ + D K K+ +R+ Y K K +
Sbjct: 21 IAEAVRAFPVLYDKSIKDFKDKNKKENAWKQVAEQAGCSVDEAKRKFLNLRNRYSKDKNK 80
Query: 66 VKDSAFNGK 74
+K + +G+
Sbjct: 81 IKSKSKSGE 89
>SB_15897| Best HMM Match : DUF134 (HMM E-Value=7.5)
Length = 311
Score = 35.5 bits (78), Expect = 0.037
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 2 DVGRLIECVKDHVYLYDIKHKDYKNIALKTAVWEAIAKELHQTCDTVKLKWKTIRDGYIK 61
++ LI ++H LYD++H DY + ++ I+++L T +K K +R Y K
Sbjct: 24 EIEHLITLWREHEELYDLRHVDYPKRDRRRLAFKHISEQLGITVPEIKKKMTNLRTYYTK 83
>SB_6476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 293
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/55 (29%), Positives = 32/55 (58%)
Query: 2 DVGRLIECVKDHVYLYDIKHKDYKNIALKTAVWEAIAKELHQTCDTVKLKWKTIR 56
+V +LI+ ++ L+D+ +K+Y + E IA+++ T + VK K K++R
Sbjct: 36 EVEQLIDLFEERPCLWDVSNKEYYQKGNRQRAEEEIAEQMGITLNDVKSKIKSLR 90
>SB_48325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 872
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 43 QTCDTVKLKWKTIRDGYIKYKKQVKDSAFNGKKINDYIWRSQLVFLDSHNVTRNSKANQN 102
Q C+T+ ++ KY K D + K+N R +L +L+ HN R K+N +
Sbjct: 33 QKCNTLVAGLDNLKPFEFKYHKLNLDKLNHRVKLNH---RDKLKYLNKHNQDRRDKSNND 89
Query: 103 NQK 105
K
Sbjct: 90 RTK 92
>SB_29240| Best HMM Match : IncA (HMM E-Value=0.17)
Length = 555
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 122 HSPKPEAHTSQESQSPSDMNYQNESRLTKRKTFSS 156
H PKPEA T+ + + +N Q+E+ L F++
Sbjct: 513 HKPKPEAKTNPKPEVTKPLNTQHENNLVMITVFTA 547
>SB_52503| Best HMM Match : zf-CCHC (HMM E-Value=2.6)
Length = 517
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 2 DVGRLIECVKDHVYLYDIKHKDYKNIALKTAVWEAIAKELHQ------TCDTVKLKWKTI 55
+ +LI+ ++ LY+ +HKD+ ++A + I + L + T + + K + +
Sbjct: 274 ETAKLIKLWEEENVLYNGRHKDHFRRECRSAAMDRIQQRLAEDGDLLFTLEELHKKMRCL 333
Query: 56 RDGYIKYKKQVKDSAFNGKKINDYIWRSQLVFLDSHNVTRNSKANQNNQKALTQLQT 112
R Y K K+ K S N D ++ H + + Q+ + T L T
Sbjct: 334 RTYYSKEIKKEKISKLNSSNPQDLYTSRWPLYHSLHFLKDYINSKQSLSSSSTPLNT 390
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 51 KWKTIRDGYIKYKKQVKDSAFNGKKINDYIWRSQLVFLDSHNVTRNSKANQNNQKALTQL 110
K + G+ ++ DS + K +N I++ + N NSKA ++N+ + +
Sbjct: 1458 KMLALSRGFSYLDEESTDSP-DPKSLNPKIYQKTFISALEDNKENNSKATESNRDETSIV 1516
Query: 111 QTEDSPGEAAWHSPKPEAHTSQE 133
Q G AA PE + ++
Sbjct: 1517 QKTPKTGRAAPRFSSPEIYRMEK 1539
>SB_22280| Best HMM Match : CagA (HMM E-Value=3.3)
Length = 347
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 122 HSPKPEAHTSQESQSPSDMNYQNESRLTKRKTFSS 156
H PKPEA T+ + +N Q+E+ L F++
Sbjct: 305 HKPKPEAKTNPKPDVTKPLNTQHENNLVMITAFTA 339
>SB_9532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 90 SHNVTRNSKANQNNQKALTQLQTEDSPGE---AAWHSPKPEAHTSQESQSPSDMNYQNES 146
S R S++ Q + LT ++++ S G PK + Q Q+PS ++++
Sbjct: 105 SKTFVRESQSKQEKRITLTPIKSQASVGYNYGVPSSKPKSKGAAKQMFQAPSHASHESRI 164
Query: 147 RLTKRKTFSSRTQTD 161
R+ RK SR + +
Sbjct: 165 RVCVRKRPLSRDEKE 179
>SB_58863| Best HMM Match : Fibrinogen_BP (HMM E-Value=2)
Length = 1037
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 89 DSHNVTRNSKANQN-NQKALTQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESR 147
D+ TR S++ + +K Q+ TE++ + P A + P +NY+ +SR
Sbjct: 291 DAAEKTRASESKDSIKKKKSEQIVTENTKRDMDSEIPGTPATLDSSFEGPQILNYRRDSR 350
Query: 148 LTKRKTFSSRTQTD 161
+ T RT+ +
Sbjct: 351 SSTMMTSRPRTRLE 364
>SB_45772| Best HMM Match : DUF1261 (HMM E-Value=5.1)
Length = 218
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 120 AWHSPKPEAHTSQESQSPSDMNYQNESRLTKRKTFSS 156
A H PKPEA T + +N Q+E+ L F++
Sbjct: 174 AAHKPKPEAKTDPKPDVTKPLNTQHETNLVMITVFTA 210
>SB_41898| Best HMM Match : EGF_CA (HMM E-Value=3.9e-14)
Length = 1087
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 4 GRLIECVKDHVYLYDIKHKDYKNIALKTAVWEAIAKELHQ 43
G+ + +K++V +IKH+DYKN +K +A E HQ
Sbjct: 1045 GKTAKGIKNNVIKINIKHEDYKNY-IKGRQTDAPKNEDHQ 1083
>SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 89 DSHNVTRNSKANQNNQKALTQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESRL 148
++ NV S+ + QK Q ED + KP+ H E+ + + +R
Sbjct: 179 NNENVLDASELTEREQKQTENDQLEDKTTQTTETPQKPKQHDVAETNVNTRRRKKENARF 238
Query: 149 TKRKTFSSRTQT 160
T SSR Q+
Sbjct: 239 KDEATGSSRKQS 250
>SB_31663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 122 HSPKPEAHTSQESQSPSDMNYQNESRLTKRKTFSS 156
H PKPEA T+ + +N Q+E+ L F++
Sbjct: 642 HKPKPEAKTNPKPDVTKPLNTQHENNLVMITVFTA 676
>SB_19118| Best HMM Match : MutS_II (HMM E-Value=4)
Length = 271
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 122 HSPKPEAHTSQESQSPSDMNYQNESRLTKRKTFSS 156
H PKPEA T+ + +N Q+E+ L F++
Sbjct: 229 HKPKPEAKTNPKPDVTKPLNTQHENNLVMITAFTA 263
>SB_10203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1091
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 122 HSPKPEAHTSQESQSPSDMNYQNESRLTKRKTFSS 156
H PKPEA T+ + +N Q+E+ L F++
Sbjct: 792 HKPKPEAKTNPKPDVTKPLNTQHENNLVMITVFAA 826
>SB_55887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 92 NVTRNSKANQNNQKALTQLQTEDSPGEAAWHSPKPEAHTSQESQSP 137
+VT+ S ++ K+ +L+TE+ ++W SP + E +SP
Sbjct: 307 DVTQESSSSSIKSKSAQELETENRRAHSSWLSPS-KTKDLMEKESP 351
>SB_51990| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1055
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
Query: 46 DTVKLKWKTIRDGYIKYKKQVKDSAFNGKKINDYIWRSQLVFLDSHNVTRNSKANQNNQK 105
DTV++ + + G + + +DS KK + + L +N +
Sbjct: 563 DTVEMDYLSSDGGNLGSDCEDEDSQTMLKKFARRFSQQAFLALSLPEALMRETLRTSNDQ 622
Query: 106 ALTQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESR 147
L L +E G+ +H+P T Q + YQNE +
Sbjct: 623 QLVHLMSEQGVGDEYFHAPVSTC-TLQFYDKELEQQYQNEGQ 663
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 92 NVTRNSKANQNNQKALTQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQ-NESRLTK 150
++T+ SK ++KA PGE + KP+A S++ P D + Q R
Sbjct: 536 HMTKTSKPQDQDKKAAR-------PGEKSCKKSKPQA-ASRKKSKPQDQDKQAARPRQAS 587
Query: 151 RKTFSSRTQ 159
RKT +S+ Q
Sbjct: 588 RKTKTSKPQ 596
>SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4)
Length = 1633
Score = 27.9 bits (59), Expect = 7.4
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 68 DSAFNGKKINDYIWRSQLVFLDSHNVTRNSKANQNNQKALTQLQTEDSP---GEAAWHSP 124
DS+F+ + D +++S L S R A + ++ +L LQ +SP + + P
Sbjct: 1512 DSSFDDE---DDVFQSPSDILRSRK-KRPKMATRISENSLKLLQ--ESPILANKKSVFRP 1565
Query: 125 KPEAHTSQESQ-SPSDMNYQNESRLTKRK---TFSSRTQTD 161
P +HT + SPSD N ++RL++RK FSS + D
Sbjct: 1566 SPSSHTKNWADFSPSD-NITKKARLSRRKRSEAFSSESDHD 1605
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 68 DSAFNGKKINDYIWRSQLVFLDSHNVTRNSKANQNNQKALTQLQTEDSPGEAAWHSPKPE 127
+ AF G +W + L + N+ + +A Q N KA + E + P+
Sbjct: 806 EEAFTGDISQMNVWNTFLTDKGAQNLVHSCQAFQGNVKAWGDFRAE----LQGLYVITPK 861
Query: 128 AHTSQESQSPSDMNYQNESR-LTKRKTFSSRT 158
++ S +E+R L+++KT SS+T
Sbjct: 862 SYACDASSKIRGYRMNHEARVLSRQKTLSSQT 893
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 93 VTRNSKANQNNQKALTQLQ-----TEDSPGEAAWHSPKPEAHTSQ-ESQSPSDMNYQNES 146
V N ++NNQK +Q T S E KPE HTS+ S SD ++
Sbjct: 801 VEENKSESENNQKDNSQSSSPNGSTSSSKDECESTKEKPEKHTSRPRHDSKSDKKNSDDK 860
Query: 147 RLTKRKTFSSRTQ 159
R+ + Q
Sbjct: 861 HRRHRRRREKKKQ 873
>SB_27347| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 280
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 92 NVTRNSKANQNNQKALTQLQ-TEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESRLTK 150
N + A N Q AL+ Q T D G+ + +AH SQ + NYQ+E L
Sbjct: 153 NQGKYEDALNNYQHALSLFQKTGDESGQGDAYLGMGDAHWSQGKYEDAMNNYQHELSLF- 211
Query: 151 RKTFSSRTQ 159
+KT R Q
Sbjct: 212 QKTGDERGQ 220
>SB_25279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 93 VTRNSKANQNNQKALTQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQ-NESRLTKR 151
+T+ SK ++KA PGE + KP+A S++ P D + Q R R
Sbjct: 1 MTKTSKPQDQDKKAAR-------PGEKSCKKTKPQA-ASRKKSKPQDQDKQAARPRQASR 52
Query: 152 KTFSSRTQ 159
KT +S+ Q
Sbjct: 53 KTKTSKPQ 60
>SB_5627| Best HMM Match : 7tm_1 (HMM E-Value=8.4e-16)
Length = 546
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 82 RSQLVFLDSHNVTRNSKANQNNQKALTQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMN 141
R++ L S VT N + K L ++ T SP ++ H + E T+Q+
Sbjct: 303 RTEAETLPSTTVT-NLEQITTKPKNLNKIWTSKSPYKSRTHPSQTEPRTAQKQSDILSGI 361
Query: 142 YQNESRLTKRKTF 154
+ S LTK+ F
Sbjct: 362 HDTNSTLTKKLYF 374
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 89 DSHNVTRNSKANQNNQKALTQLQTEDSPGEAAWHSPKPEAHTSQESQ 135
+S N ++ N Q+ TQ ++ DS + +S + E+ TS+E +
Sbjct: 220 ESSEEEENQESAVNKQETATQDESSDSEESSEGNSEEDESETSEEER 266
>SB_50860| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 933
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 99 ANQNNQKALTQLQ-TEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESRLTKR 151
A N Q AL+ Q T D G+A+ + HTSQ + NYQ+ L ++
Sbjct: 534 AMNNYQHALSLFQKTGDESGQASAYHCMGNVHTSQGKYEDAMNNYQHALSLFQK 587
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.124 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,727,302
Number of Sequences: 59808
Number of extensions: 240521
Number of successful extensions: 851
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 836
Number of HSP's gapped (non-prelim): 31
length of query: 230
length of database: 16,821,457
effective HSP length: 80
effective length of query: 150
effective length of database: 12,036,817
effective search space: 1805522550
effective search space used: 1805522550
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 58 (27.5 bits)
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