GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002292-TA|BGIBMGA002292-PA|IPR006578|MADF
         (230 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   3.3  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   4.3  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   4.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.7  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   7.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 99  ANQNNQKALTQLQTEDSPGEAAWHSPKPEAHTSQE 133
           A+Q  Q+  +  Q    PG AA   P P  H  ++
Sbjct: 893 ASQEQQQRSSSSQQHRGPGAAAATGPPPPTHRLEQ 927


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 90   SHNVTRNS--KANQNNQKALTQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESR 147
            SH+V+  +  K      + ++ ++ + S GE +     P++     S    + +    SR
Sbjct: 3110 SHSVSLQASVKTQPPRLRFVSSVEFKTSSGETSTTPLSPDSLADDSSGENHNKHRLQRSR 3169

Query: 148  LTKRKTFSSR 157
               RKTF +R
Sbjct: 3170 AQSRKTFRNR 3179


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 104 QKALTQLQTEDSPGEAAWHSPKPEAHTSQESQSPS 138
           ++ +  ++    PG   WHSPK  A+    +  P+
Sbjct: 64  EEVMADVERVIMPGVTHWHSPKFHAYFPTANSYPA 98


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 104 QKALTQLQTEDSPGEAAWHSPKPEAHTSQESQSPS 138
           ++ +  ++    PG   WHSPK  A+    +  P+
Sbjct: 95  EEVMADVERVIMPGVTHWHSPKFHAYFPTANSYPA 129


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 105  KALTQLQTEDSPGEAAWHSPKPEAH--TSQESQ 135
            KA  Q  ++   G A W+    EAH  T +ESQ
Sbjct: 1008 KAARQEMSKHRKGSAEWNKINNEAHKTTREESQ 1040


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 9/34 (26%), Positives = 19/34 (55%)

Query: 120 AWHSPKPEAHTSQESQSPSDMNYQNESRLTKRKT 153
           A H P+   HT Q S++ S   + ++  L ++++
Sbjct: 832 AMHPPRGSRHTRQGSEASSPPPFLDDRSLKRQRS 865


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.310    0.124    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,873
Number of Sequences: 2123
Number of extensions: 6270
Number of successful extensions: 52
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 6
length of query: 230
length of database: 516,269
effective HSP length: 62
effective length of query: 168
effective length of database: 384,643
effective search space: 64620024
effective search space used: 64620024
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 47 (23.0 bits)