Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002292-TA|BGIBMGA002292-PA|IPR006578|MADF
(230 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical ... 59 2e-09
AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical ... 44 7e-05
Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z81530-1|CAB04312.1| 290|Caenorhabditis elegans Hypothetical pr... 37 0.014
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 31 0.69
AF022983-5|AAB69944.1| 387|Caenorhabditis elegans Hypothetical ... 30 1.6
Z93385-5|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 29 2.8
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 29 2.8
U61954-4|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z78544-5|CAB01759.2| 324|Caenorhabditis elegans Hypothetical pr... 29 3.7
AY398504-1|AAQ96213.1| 324|Caenorhabditis elegans SEL-7 protein. 29 3.7
AL031265-2|CAE48506.1| 324|Caenorhabditis elegans Hypothetical ... 29 3.7
Z82262-6|CAB05149.1| 374|Caenorhabditis elegans Hypothetical pr... 28 4.9
AL021346-1|CAA16154.1| 823|Caenorhabditis elegans Hypothetical ... 28 6.5
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 27 8.5
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 27 8.5
AL132949-23|CAB70113.2| 152|Caenorhabditis elegans Hypothetical... 27 8.5
AL132949-6|CAB70102.1| 152|Caenorhabditis elegans Hypothetical ... 27 8.5
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 27 8.5
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 27 8.5
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 27 8.5
>AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical
protein ZC416.1 protein.
Length = 139
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 5 RLIECVKDHVYLYDIKHKDYKNIALKTAVWEAIAKELHQTCDTVKLKWKTIRDGYIKYKK 64
RLI VK +LYD + Y ++ + + W IA+ L T + VK +WKT+RD Y K +K
Sbjct: 52 RLIAEVKARPFLYDQSDEGYNLLSWRNSAWNEIAENLETTSEHVKTRWKTLRDRYKKEEK 111
Query: 65 QVKDSAFNGKKINDYIWRSQLVFLDSH 91
+ + S KK + ++++ L F+ +H
Sbjct: 112 KERVS----KKASSWVFQRPLKFIQAH 134
>AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical
protein H20J04.3 protein.
Length = 312
Score = 44.4 bits (100), Expect = 7e-05
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 5 RLIECVKDHVYLYDIKHKDYKNIALKTAVWEAIAKELHQTCD--TVKLKWKTIRDGYIKY 62
RLIE V+ L+D + Y+N K VW+ + L D + +WK +RD Y K
Sbjct: 9 RLIEAVRHSRCLFDNTDRQYRNTEYKNRVWQRLVTVLGFDGDPRMLSARWKQLRDKYGKE 68
Query: 63 KKQVKDSAFNGKKINDYIWRSQLVFLDSHNVTR 95
K++ K G + + + + L FLD H R
Sbjct: 69 KRKQK----YGNEKSSWQYFKHLHFLDPHMTDR 97
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 6 LIECVKDHVYLYDIKHKDYKNIALKTAVWEAIAKELHQ--TCDTVKLKWKTIRDGYIKYK 63
LI V+ H LYD++ Y++ +T W I +L T ++ +WK RD Y++ K
Sbjct: 123 LILEVRRHPCLYDVRDPKYRHGDCRTQAWGMIIDKLRYPGTVPSIYKQWKKHRDRYVREK 182
Query: 64 KQVKDSAF-NGKKINDYIWRSQLVFLDSH 91
+++++ N + ++ + + ++D H
Sbjct: 183 RRLRNLGDPNVQDVSTWEMYDDMAWIDQH 211
>Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 6 LIECVKDHVYLYDIKHKDYKNIALKTAVWEAIAKELHQTCDTVKL--KWKTIRDGYIKYK 63
LI+ V+ + +Y+ +K K +W+ I+ E+ V+L KWK +RD Y++ +
Sbjct: 22 LIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVELERKWKHMRDKYVRLR 81
Query: 64 KQVKDSAFNGKKINDYIWRSQLVFLDSHNVTRNSKANQN 102
KQ K A K Y + ++ FLD + RN K ++
Sbjct: 82 KQDKQKAPIKKTNKWYNYYHKMSFLDPYVEHRNRKRQKD 120
>Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 6 LIECVKDHVYLYDIKHKDYKNIALKTAVWEAIAKELHQTCDTVKL--KWKTIRDGYIKYK 63
LI+ V+ + +Y+ +K K +W+ I+ E+ V+L KWK +RD Y++ +
Sbjct: 22 LIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVELERKWKHMRDKYVRLR 81
Query: 64 KQVKDSAFNGKKINDYIWRSQLVFLDSHNVTRNSKANQN 102
KQ K A K Y + ++ FLD + RN K ++
Sbjct: 82 KQDKQKAPIKKTNKWYNYYHKMSFLDPYVEHRNRKRQKD 120
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 5 RLIECVKDHVYLYDIKHKDYKNIALKTAVWEAIAKELHQTC--DTVKLKWKTIRDGYIKY 62
RLI V+ + LY+ + + + +WE+IAK + C + K +W +RD +Y
Sbjct: 10 RLINEVRKYPCLYNHSRRGSGDTMERQRLWESIAKNIDPNCAAEFAKKRWLQLRD---RY 66
Query: 63 KKQVKDSAFNG 73
+K++K + NG
Sbjct: 67 RKELKIAIKNG 77
>Z81530-1|CAB04312.1| 290|Caenorhabditis elegans Hypothetical
protein F36D1.1 protein.
Length = 290
Score = 36.7 bits (81), Expect = 0.014
Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 25/174 (14%)
Query: 6 LIECVKDHVYLYDIKHKDYKNI-ALKTAVWEAIAKELHQ--------TCDTVKLKWKTIR 56
LI +++ ++D + N LKT+ + EL+ TC+ V+ +WK ++
Sbjct: 12 LINAIRNRPVIWDKNYFGESNYRTLKTSCLREVTSELNSMFQMPIKFTCEDVRSQWKNLK 71
Query: 57 DGYIKYKKQVKDSAFNGKKINDYIWR--SQLVFLDSHNVTR--------------NSKAN 100
D +++ + V + + + + W+ L FLD R ++
Sbjct: 72 DTFVRKLRWVHEGKYMEDAMKEPTWKFYRMLTFLDEKEAKRLGDTCEHTYELAPNSTSCG 131
Query: 101 QNNQKALTQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESRLTKRKTF 154
Q Q + TE+ + + P P+ S NE ++T TF
Sbjct: 132 QRAQISYEPTSTEEKMFQMFNNQPPPQLSQQSMIDSSQIATCSNEPKMTSSSTF 185
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/57 (22%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 86 VFLDSHNVTRNSKANQNNQKALTQLQTEDSP-GEAAWHSPKPEAHTSQESQSPSDMN 141
+ LD+ ++ +S+ ++ K ++DS + + HSP P +H+S ++Q+ + ++
Sbjct: 710 IILDNKSIVNDSEKSEIFAKIFASHYSDDSSQSQNSLHSPSPTSHSSLQNQTSTSLH 766
>AF022983-5|AAB69944.1| 387|Caenorhabditis elegans Hypothetical
protein R13D11.4 protein.
Length = 387
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 88 LDSHNVTRNSKANQNN--QKALTQLQTEDSPGEAAWH 122
L H RN + N + ALT++Q + PGE WH
Sbjct: 17 LGEHLKFRNGRETNNRFLKAALTEIQLNNYPGEPKWH 53
>Z93385-5|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 67 KDSAFNGKKINDYIWRSQLVFLDSHNVTRNSKANQNNQKALTQLQTED--SPGEAAWHSP 124
K SA NGKK D S+ D + + N +KA + +D S G+ +
Sbjct: 76 KSSAKNGKK-KDVGSDSE----DDYKPEKKKSKKNNKKKAQESSEDDDEESEGDVSEEDV 130
Query: 125 KPEAHTSQESQSPSDMNYQNESRLTKRK 152
KP+ H+ E + + ++ KRK
Sbjct: 131 KPQIHSDDELEEEDEAPTTDDEEEQKRK 158
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 67 KDSAFNGKKINDYIWRSQLVFLDSHNVTRNSKANQNNQKALTQLQTED--SPGEAAWHSP 124
K SA NGKK D S+ D + + N +KA + +D S G+ +
Sbjct: 76 KSSAKNGKK-KDVGSDSE----DDYKPEKKKSKKNNKKKAQESSEDDDEESEGDVSEEDV 130
Query: 125 KPEAHTSQESQSPSDMNYQNESRLTKRK 152
KP+ H+ E + + ++ KRK
Sbjct: 131 KPQIHSDDELEEEDEAPTTDDEEEQKRK 158
>U61954-4|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 29.1 bits (62), Expect = 2.8
Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 35 EAIAKELHQTCDTVKLKWKTIRDGYIKYKKQV--KDSAFNGKKINDYIWRSQLVFLDSHN 92
E IA+++ ++ + V + K + D ++Y+K + + S + K ++ S+ +H+
Sbjct: 216 EGIAEKMKESNNAVMDENKKLSDDNLEYRKTMLSQKSEIDSLKAENFKLVSENQL--NHD 273
Query: 93 VTRNSKANQNNQKALTQLQTEDSPG-EAAWHSPKPEAH--TSQESQSPSDMNYQNESRLT 149
V++N A Q+ + LT++ ++ G + K E H +SQ Q+ ++ +E L
Sbjct: 274 VSKNLAALQSEKLKLTEISQQEISGLKKKIEVLKSENHRLSSQIQQNTNEAAKNHEKLLE 333
Query: 150 KR 151
R
Sbjct: 334 DR 335
>Z78544-5|CAB01759.2| 324|Caenorhabditis elegans Hypothetical
protein K04G11.2 protein.
Length = 324
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 96 NSKANQNNQKALTQLQTEDSPGEAAWHSPKP-------EAHTSQESQSPSDMNYQNESRL 148
NS +++ + T+L+TEDS G+ + E+ SQ +QSP + ++E L
Sbjct: 87 NSTSDKTSSSLKTELKTEDSDGDLDMEGEEDTEELFDNESQPSQRNQSPKETEVEDEKVL 146
>AY398504-1|AAQ96213.1| 324|Caenorhabditis elegans SEL-7 protein.
Length = 324
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 96 NSKANQNNQKALTQLQTEDSPGEAAWHSPKP-------EAHTSQESQSPSDMNYQNESRL 148
NS +++ + T+L+TEDS G+ + E+ SQ +QSP + ++E L
Sbjct: 87 NSTSDKTSSSLKTELKTEDSDGDLDMEGEEDTEELFDNESQPSQRNQSPKETEVEDEKVL 146
>AL031265-2|CAE48506.1| 324|Caenorhabditis elegans Hypothetical
protein K04G11.2 protein.
Length = 324
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 96 NSKANQNNQKALTQLQTEDSPGEAAWHSPKP-------EAHTSQESQSPSDMNYQNESRL 148
NS +++ + T+L+TEDS G+ + E+ SQ +QSP + ++E L
Sbjct: 87 NSTSDKTSSSLKTELKTEDSDGDLDMEGEEDTEELFDNESQPSQRNQSPKETEVEDEKVL 146
>Z82262-6|CAB05149.1| 374|Caenorhabditis elegans Hypothetical
protein C43F9.6 protein.
Length = 374
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/52 (25%), Positives = 29/52 (55%)
Query: 87 FLDSHNVTRNSKANQNNQKALTQLQTEDSPGEAAWHSPKPEAHTSQESQSPS 138
FLD N ++ +K+ + + +TE S ++ + + A+T+ +S++PS
Sbjct: 17 FLDKQNSSKTAKSRVGSSEKSKSSKTEKSTQQSEKKTERSTANTTIKSEAPS 68
>AL021346-1|CAA16154.1| 823|Caenorhabditis elegans Hypothetical
protein H37A05.1 protein.
Length = 823
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Query: 61 KYKKQVKDSAFNGKKINDYIWRSQLVFLDSHNVTRNSKANQNNQKALTQ-LQTEDSPGEA 119
K KKQ +D+ + + + + WRS D + + +L + L + +P E
Sbjct: 351 KRKKQDEDAEKSTSRWSSWFWRSSTSTADEEQKEKEKLEQEEQGISLDELLNSSSNPVEI 410
Query: 120 AWHSPKPEAHTSQESQSPSDMNYQNESRLTKRKTFSSRT 158
+ KP + TS +S S Q S ++ ++ T
Sbjct: 411 EKYLGKPPSVTSIDSGHVSRGVSQPSSPISNHDDYTPTT 449
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 27.5 bits (58), Expect = 8.5
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 89 DSHNVTRNSKANQNNQKALTQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESRL 148
D + ++ +Q + KA TQL + P + S KP A TS + PS + +N +
Sbjct: 427 DGSSTQTSTHPSQLSVKA-TQLVSTAEPSTDTFQSTKPIASTSLPTDIPSSLVSENST-- 483
Query: 149 TKRKTFSSRTQTDM 162
T T S T M
Sbjct: 484 TSAATTLSENSTVM 497
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 46 DTVKLKWKTIRDGYIKYKKQVKDSAFNGKKINDYIWRSQLVFLD 89
+ VK W RDG I+ + F GK D +WR + D
Sbjct: 64 ERVKANWVDDRDGPIRNIQGHASETFPGKDTVDKVWRKCVELYD 107
>AL132949-23|CAB70113.2| 152|Caenorhabditis elegans Hypothetical
protein Y53F4B.26 protein.
Length = 152
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 108 TQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESRLTKRKTFSSRTQTDM 162
T+ +T A W + TSQES+S M++ E + KR + S + +M
Sbjct: 47 TRSRTLSDNSNAVWKRERRSRETSQESESRLRMDW--ERKKEKRASMSEEEKAEM 99
>AL132949-6|CAB70102.1| 152|Caenorhabditis elegans Hypothetical
protein Y53F4B.7 protein.
Length = 152
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 108 TQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESRLTKRKTFSSRTQTDM 162
T+ +T A W + TSQES+S M++ E + KR + S + +M
Sbjct: 47 TRSRTLSDNSNAVWKRERRSRETSQESESRLRMDW--ERKKEKRASMSEEEKAEM 99
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 108 TQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESRLTKRKTFSSRTQTDM 162
T+ +T A W + TSQES+S M++ E + KR + S + +M
Sbjct: 47 TRSRTLSDNSNAVWKRERRSRETSQESESRLRMDW--ERKKEKRASMSEEEKAEM 99
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 108 TQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESRLTKRKTFSSRTQTDM 162
T+ +T A W + TSQES+S M++ E + KR + S + +M
Sbjct: 47 TRSRTLSDNSNAVWKRERRSRETSQESESRLRMDW--ERKKEKRASMSEEEKAEM 99
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 108 TQLQTEDSPGEAAWHSPKPEAHTSQESQSPSDMNYQNESRLTKRKTFSSRTQTDM 162
T+ +T A W + TSQES+S M++ E + KR + S + +M
Sbjct: 47 TRSRTLSDNSNAVWKRERRSRETSQESESRLRMDW--ERKKEKRASMSEEEKAEM 99
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.310 0.124 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,967,925
Number of Sequences: 27539
Number of extensions: 180521
Number of successful extensions: 564
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 553
Number of HSP's gapped (non-prelim): 24
length of query: 230
length of database: 12,573,161
effective HSP length: 79
effective length of query: 151
effective length of database: 10,397,580
effective search space: 1570034580
effective search space used: 1570034580
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 58 (27.5 bits)
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