GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002291-TA|BGIBMGA002291-PA|undefined
         (68 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051444-1|AAK92868.1|  196|Drosophila melanogaster GH11432p pro...    26   5.6  
AE013599-3387|AAF46840.2|  196|Drosophila melanogaster CG3624-PA...    26   5.6  
AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p pro...    26   7.4  
AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA...    26   7.4  

>AY051444-1|AAK92868.1|  196|Drosophila melanogaster GH11432p
           protein.
          Length = 196

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%)

Query: 2   SPKIHGSKLPPVLSPTLTIYNWPPQLDRSQHTYD---PSSMTSLIVSARSFVNDTV 54
           SP++ GS L  VL P+ ++ N   ++  ++H+ D   P S TS   SA SF+  TV
Sbjct: 130 SPQVAGSYLCKVL-PSGSVVN--TKVTIAEHSLDAIAPESSTSAAGSASSFLGCTV 182


>AE013599-3387|AAF46840.2|  196|Drosophila melanogaster CG3624-PA
           protein.
          Length = 196

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%)

Query: 2   SPKIHGSKLPPVLSPTLTIYNWPPQLDRSQHTYD---PSSMTSLIVSARSFVNDTV 54
           SP++ GS L  VL P+ ++ N   ++  ++H+ D   P S TS   SA SF+  TV
Sbjct: 130 SPQVAGSYLCKVL-PSGSVVN--TKVTIAEHSLDAIAPESSTSAAGSASSFLGCTV 182


>AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p protein.
          Length = 2486

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)

Query: 6    HGSKLPPVLS-PTLTIYNWPPQLDRS 30
            HGS LPPVL   T  + N PP   RS
Sbjct: 1286 HGSYLPPVLPVATPNLSNLPPTQHRS 1311


>AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA
            protein.
          Length = 2486

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)

Query: 6    HGSKLPPVLS-PTLTIYNWPPQLDRS 30
            HGS LPPVL   T  + N PP   RS
Sbjct: 1286 HGSYLPPVLPVATPNLSNLPPTQHRS 1311


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.315    0.131    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,735,117
Number of Sequences: 52641
Number of extensions: 121884
Number of successful extensions: 318
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 318
Number of HSP's gapped (non-prelim): 4
length of query: 68
length of database: 24,830,863
effective HSP length: 48
effective length of query: 20
effective length of database: 22,304,095
effective search space: 446081900
effective search space used: 446081900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)