GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002290-TA|BGIBMGA002290-PA|undefined
         (154 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1RL09 Cluster: Exodeoxyribonuclease I; n=10; Alteromon...    33   3.6  
UniRef50_Q9P7I3 Cluster: Uncharacterized WD repeat-containing pr...    32   4.8  
UniRef50_UPI0000498BBE Cluster: hypothetical protein 19.t00001; ...    32   6.4  
UniRef50_Q4T684 Cluster: Chromosome undetermined SCAF8878, whole...    32   6.4  
UniRef50_A1CQG1 Cluster: GPI anchored serine-threonine rich prot...    32   6.4  
UniRef50_A3MTC5 Cluster: Putative uncharacterized protein; n=1; ...    32   6.4  
UniRef50_P09485 Cluster: Calcium-binding protein LPS1-alpha; n=2...    31   8.4  

>UniRef50_A1RL09 Cluster: Exodeoxyribonuclease I; n=10;
           Alteromonadales|Rep: Exodeoxyribonuclease I - Shewanella
           sp. (strain W3-18-1)
          Length = 472

 Score = 32.7 bits (71), Expect = 3.6
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 3/81 (3%)

Query: 51  PNRCFDDYTKCLVSQDNPTPVCGFNRPTDVEEYEGYRTFNSYCDAYFDNCRKGYRYWRIL 110
           P   F    + L SQ N T V G+N     +E   Y  + ++ D Y    + G   W I+
Sbjct: 80  PETEFMGRIQALFSQPN-TCVAGYNSLRFDDEVTRYGFYRNFIDPYAREWQNGNSRWDII 138

Query: 111 DTGRCDFKYRDHRDGITETLR 131
           D  R  + +R   DGI   L+
Sbjct: 139 DLVRACYAFRP--DGINWPLK 157


>UniRef50_Q9P7I3 Cluster: Uncharacterized WD repeat-containing
           protein C664.15; n=1; Schizosaccharomyces pombe|Rep:
           Uncharacterized WD repeat-containing protein C664.15 -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 651

 Score = 32.3 bits (70), Expect = 4.8
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query: 13  IDDAMVIDVGKYTTVRLDFINDQYMKFDDPFNEKWNAQPNRCFDDYTKCLVSQDNP 68
           I D+ +      TTVRL  +++  +  D+P  E  N+ P++  D+ T  L S   P
Sbjct: 382 IQDSFIATGSMDTTVRLWNLDNDVLHKDNPVEESLNSPPDQPVDNATNVLTSHTAP 437


>UniRef50_UPI0000498BBE Cluster: hypothetical protein 19.t00001;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 19.t00001 - Entamoeba histolytica HM-1:IMSS
          Length = 256

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 13/94 (13%)

Query: 6   TDIPQSDIDDAMVI---DVGKYTTVRLDFINDQYMKFDDP---FNEKWNAQPNRCFDDYT 59
           TDI Q+ ++DA+V+    +  + ++   F ND Y     P    ++  + Q     D+ T
Sbjct: 43  TDIDQTGVEDALVLLNETMEIFESLHEQFYNDSYSLTTPPVVLLSQLLSYQVPSLIDELT 102

Query: 60  K---CLVSQDNPTPVCGFNRPTDVEEYEGYRTFN 90
           K   C++  DN   + G+    D EEY GY   N
Sbjct: 103 KLNECIII-DNGVYIIGY---VDKEEYIGYLLMN 132


>UniRef50_Q4T684 Cluster: Chromosome undetermined SCAF8878, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF8878, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 700

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 72  CGFNRPTDVEEYEGYRTFNSYCDAYFDNC----RKGYRYWRILDTGRCDFKYRDHRDGIT 127
           C F+    +++Y G+     + D   DN     ++  R   + D    + +Y+ HRDG++
Sbjct: 600 CSFSIKQGIQKYGGHAVTEKHLDLLRDNIGAKWKRCARRLGLTDVEIENIEYKSHRDGLS 659

Query: 128 ETLRRLWD 135
           E + ++ D
Sbjct: 660 EMVHQMLD 667


>UniRef50_A1CQG1 Cluster: GPI anchored serine-threonine rich
           protein; n=3; Trichocomaceae|Rep: GPI anchored
           serine-threonine rich protein - Aspergillus clavatus
          Length = 207

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 16/48 (33%), Positives = 21/48 (43%)

Query: 48  NAQPNRCFDDYTKCLVSQDNPTPVCGFNRPTDVEEYEGYRTFNSYCDA 95
           N Q   C  +  KCL  Q N    C  N P   + +   +T  SYC+A
Sbjct: 86  NPQLTACAPNEWKCLCEQSNNVLTCYNNCPGHPDRFGAAQTKESYCNA 133


>UniRef50_A3MTC5 Cluster: Putative uncharacterized protein; n=1;
           Pyrobaculum calidifontis JCM 11548|Rep: Putative
           uncharacterized protein - Pyrobaculum calidifontis
           (strain JCM 11548 / VA1)
          Length = 212

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 116 DFKYR-DHRDGITETLRRLWDVALEDKNNNFETENFDQKV 154
           +F+Y    R GI E L+RL  +A E KN N   EN +QK+
Sbjct: 18  EFRYAVAGRLGILEVLKRLDAIAEEQKNINRNIENINQKI 57


>UniRef50_P09485 Cluster: Calcium-binding protein LPS1-alpha; n=2;
           Lytechinus pictus|Rep: Calcium-binding protein
           LPS1-alpha - Lytechinus pictus (Painted sea urchin)
          Length = 321

 Score = 31.5 bits (68), Expect = 8.4
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 27  VRLDFINDQYMKFDDPFNEKWNAQPNRCFDDYTKCLVSQDNPTPVCGFNRPTDVEEYEGY 86
           V  D I  Q+M  D   N K    P       TK +  Q     V    + +  E+ +GY
Sbjct: 232 VSKDHIKQQFMAIDKDKNGK--ISPEEMVFGITK-IYRQMVDFEVAKLIKESSFEDDDGY 288

Query: 87  RTFNSYCDAYFDNC--RKGYRYWRI 109
             FN + + +F NC  +    YW I
Sbjct: 289 INFNEFVNRFFSNCPYKINSLYWPI 313


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.321    0.140    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,931,543
Number of Sequences: 1657284
Number of extensions: 9415747
Number of successful extensions: 15781
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 15778
Number of HSP's gapped (non-prelim): 7
length of query: 154
length of database: 575,637,011
effective HSP length: 94
effective length of query: 60
effective length of database: 419,852,315
effective search space: 25191138900
effective search space used: 25191138900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 68 (31.5 bits)