GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002290-TA|BGIBMGA002290-PA|undefined
         (154 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060622-1|AAL28170.1|  706|Drosophila melanogaster GH04548p pro...    28   6.4  
AE013599-314|AAF59283.1|  706|Drosophila melanogaster CG11060-PA...    28   6.4  
AY071298-1|AAL48920.1|  687|Drosophila melanogaster RE32772p pro...    27   8.4  
AJ224676-1|CAA12058.1|  687|Drosophila melanogaster rho type GEF...    27   8.4  
AE014134-3381|AAN11112.1|  925|Drosophila melanogaster CG18362-P...    27   8.4  
AE014134-3232|AAF53887.2|  687|Drosophila melanogaster CG10043-P...    27   8.4  
AE014134-3231|AAF53886.1|  687|Drosophila melanogaster CG10043-P...    27   8.4  

>AY060622-1|AAL28170.1|  706|Drosophila melanogaster GH04548p
           protein.
          Length = 706

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 66  DNPTPVCGFNRPTDVEEYEGYRTFNSYCDAYFD 98
           +NP P+C + R  D  E    + F+  C  Y D
Sbjct: 494 ENPRPLCPYQRHLDEREVFNAQNFSYRCQRYED 526


>AE013599-314|AAF59283.1|  706|Drosophila melanogaster CG11060-PA
           protein.
          Length = 706

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 66  DNPTPVCGFNRPTDVEEYEGYRTFNSYCDAYFD 98
           +NP P+C + R  D  E    + F+  C  Y D
Sbjct: 494 ENPRPLCPYQRHLDEREVFNAQNFSYRCQRYED 526


>AY071298-1|AAL48920.1|  687|Drosophila melanogaster RE32772p
           protein.
          Length = 687

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 75  NRPTDVEEYEGYRTFNSYCDAYFDNCR 101
           N+PT  E+    R F +YC AY +N R
Sbjct: 592 NQPTYEEDALVLRVFEAYCAAYQNNAR 618


>AJ224676-1|CAA12058.1|  687|Drosophila melanogaster rho type GEF
           protein.
          Length = 687

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 75  NRPTDVEEYEGYRTFNSYCDAYFDNCR 101
           N+PT  E+    R F +YC AY +N R
Sbjct: 592 NQPTYEEDALVLRVFEAYCAAYQNNAR 618


>AE014134-3381|AAN11112.1|  925|Drosophila melanogaster CG18362-PE,
           isoform E protein.
          Length = 925

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 62  LVSQDNPTPVCGFNRPTDVEEYEGYRTF---NSYCDAYFDNCRKGYRYWR 108
           +V Q   TPVC F  P DV+ +   +T      Y   +    +  YR WR
Sbjct: 8   IVIQKRRTPVCQFASPLDVDIHSNPQTVVLEGKYWKRHSAVIKAEYRKWR 57


>AE014134-3232|AAF53887.2|  687|Drosophila melanogaster CG10043-PB,
           isoform B protein.
          Length = 687

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 75  NRPTDVEEYEGYRTFNSYCDAYFDNCR 101
           N+PT  E+    R F +YC AY +N R
Sbjct: 592 NQPTYEEDALVLRVFEAYCAAYQNNAR 618


>AE014134-3231|AAF53886.1|  687|Drosophila melanogaster CG10043-PA,
           isoform A protein.
          Length = 687

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 75  NRPTDVEEYEGYRTFNSYCDAYFDNCR 101
           N+PT  E+    R F +YC AY +N R
Sbjct: 592 NQPTYEEDALVLRVFEAYCAAYQNNAR 618


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.140    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,088,177
Number of Sequences: 52641
Number of extensions: 419079
Number of successful extensions: 988
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 982
Number of HSP's gapped (non-prelim): 7
length of query: 154
length of database: 24,830,863
effective HSP length: 79
effective length of query: 75
effective length of database: 20,672,224
effective search space: 1550416800
effective search space used: 1550416800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)