Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002284-TA|BGIBMGA002284-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine, IPR001314|Peptidase S1A, chymotrypsin
(485 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 39 0.008
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.042
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.055
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.055
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.13
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 35 0.17
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.29
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 33 0.68
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.68
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 32 0.90
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.90
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.2
SB_39777| Best HMM Match : DUF1168 (HMM E-Value=2.2) 31 1.6
SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 31 2.7
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 31 2.7
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 30 3.6
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.8
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 30 4.8
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 30 4.8
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 30 4.8
SB_24589| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.8
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 30 4.8
SB_10285| Best HMM Match : SAC3_GANP (HMM E-Value=4.8) 30 4.8
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 30 4.8
SB_5869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.8
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 30 4.8
SB_47448| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_45419| Best HMM Match : Trypsin (HMM E-Value=0.049) 29 6.3
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 29 6.3
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 29 6.3
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 29 8.4
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 29 8.4
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
SB_13944| Best HMM Match : Citrate_synt (HMM E-Value=0) 29 8.4
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 40.3 bits (90), Expect = 0.003
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 19/146 (13%)
Query: 91 CGGVIVDQYYVLTSAACVEDADRFYIVSGTTKYVDSFDYKKNDCVCKNRRRVVWKCIP-K 149
CGG ++D +VLT+A C+ + G Y+ N V + V + IP K
Sbjct: 57 CGGSLIDPGWVLTAAHCLVGEQPDSALLGA-------HYRSNKTVGTEKDIKVAQIIPHK 109
Query: 150 NYKFDFQDSIKWSSNDIAIVKVDKPFKFGVMEKGCEFATDLICYNNISRELEKAGTKGWI 209
NY + +NDIA++K++ P + G T + NN +++ G K +I
Sbjct: 110 NYHSPIE-----MANDIALLKLENPAN---LVNG--VGTVCLANNNTHLPVDEFG-KCYI 158
Query: 210 AGWGSMNTFREGVYRRQDVHIPENSK 235
GWGS+++ R +P SK
Sbjct: 159 TGWGSLSSGGAAPDRLMQASVPLVSK 184
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 39.1 bits (87), Expect = 0.008
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 28/180 (15%)
Query: 55 RRILYSKDVQVGNRPYMVYLQLTKESAKAHKYRGWLCGGVIVDQYYVLTSAACV---EDA 111
+R++ +V+ + P+ V+L +++ + HK CGG ++D+ +V+T+A CV D
Sbjct: 42 KRVVSGSEVEPQSWPWQVHLLQSRDGSFLHK-----CGGALIDREWVVTAAHCVFQEPDV 96
Query: 112 DRFYIVSGTTKYVDSFDYKKNDCVCKNRRRVVWKCIPKNYKFDFQDSIKWSSNDIAIVKV 171
+ ++ G D+ + D + + + +F D K DIA++K+
Sbjct: 97 SHYKVILG--------DFNR-DIKEPTEQEFDVSTLHLHQRF-LTD--KGYGYDIALLKL 144
Query: 172 DKPFKFGVMEKGCEFATDLICYNNISRELEKAGTKGWIAGWGSMNTFREGVYRRQDVHIP 231
+P EF + SR LE GT +I GWG N + ++ +P
Sbjct: 145 SRPAVIN------EFVRTVCLPAQGSRALE--GTMCFITGWGKTNITEDKSVTLREAQLP 196
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 36.7 bits (81), Expect = 0.042
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 10/70 (14%)
Query: 52 VDTRRILYSKDVQVGNRPYMVYLQLTKESAKAHKYRGWLCGGVIVDQYYVLTSAACV--E 109
V R++ + +G P+ +L L ++ G++CGG +V +VLT+A C+ +
Sbjct: 27 VPATRVISGSEALLGEWPWQAWLHL--------QHTGFICGGSLVAPGWVLTAAHCILSD 78
Query: 110 DADRFYIVSG 119
DA ++ +V G
Sbjct: 79 DASKYKVVLG 88
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 36.3 bits (80), Expect = 0.055
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 29/158 (18%)
Query: 66 GNRPYMVYLQLTKESAKAHKYRGW----------LCGGVIVDQYYVLTSAACVEDADRFY 115
G RPY + ++A+ H + W +CGG ++ + +V+T+A CV DR
Sbjct: 23 GKRPYGTSRVVNGDNAQQHSWP-WQISLRVNGRHICGGSLIAKDWVVTAAHCV---DRNP 78
Query: 116 IVSGTTKYVDSFDYKKNDCVCKNRRRVVWKCIPKNYKFDFQDSIKWSSNDIAIVKVDKPF 175
SG T V + ++ + +N R+ K + K+ +F S++ NDIA++++ +P
Sbjct: 79 TPSGYTVVVGA-HHRTGNTPVQNTFRL--KQLFKHEQF----SMRHLKNDIALLQLHEPV 131
Query: 176 KFGVMEKGCEFATDLICYNNISRELEKAGTKGWIAGWG 213
K +K + +C + S +AG + +I GWG
Sbjct: 132 K--ASDK-----VNTVCLPS-SGSRAQAGARCYITGWG 161
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 36.3 bits (80), Expect = 0.055
Identities = 49/213 (23%), Positives = 82/213 (38%), Gaps = 28/213 (13%)
Query: 56 RILYSKDVQVGNRPYMVYLQLTKESAKAHKYRGWLCGGVIVDQYYVLTSAACVEDADRFY 115
RI D G P+ V L+ + Y + CGG ++ + +VLT+A CV D
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSN---YNTFHCGGTLIAEDWVLTAAHCVVYKDSGI 1216
Query: 116 IVSGTTKYVDSFDYKKNDCVCKNRRRVVWKCIPKNYKFDFQDSIKWSSNDIAIVKVDKPF 175
G ++ +D ++ V + IP + W + D I + +
Sbjct: 1217 PYHGLRVFLG-----VHDITARHMDEHV-QIIPSAGIYS-HPRFSWRTYDSDIALIRLRW 1269
Query: 176 KFGVMEKGCEFATDLICYNNISRELEKAGTKGWIAGWGSMNTFREGVYRRQDVHIPENSK 235
K + E+ + N R L K KG + GWG R SK
Sbjct: 1270 KANI----TEYVRPVCLPNGYQRRLVKPRAKGVMLGWGVTENKRP-------------SK 1312
Query: 236 CLQEAKVCIMDNESCAKKWAQKFRNIITQYMIC 268
L+EA V ++++ +C K + + +T M+C
Sbjct: 1313 TLKEAIVPVVNHNACKKAYENETWP-VTSNMLC 1344
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 35.1 bits (77), Expect = 0.13
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Query: 56 RILYSKDVQVGNRPYMVYLQLTKESAKAHKYRGWLCGGVIVDQYYVLTSAACV--EDADR 113
R++ D +G P+ +L +T G++CGG ++ +VLT+ C+ ED ++
Sbjct: 61 RVVSGDDATLGEWPWQAWLHVTPH--------GFVCGGSLIAPQWVLTAGHCILTEDPEK 112
Query: 114 FYIVSG 119
+ +V G
Sbjct: 113 YRVVLG 118
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 54 TRRILYSKDVQVGNRPYMVYLQLTKESAKAHKYRGWLCGGVIVDQYYVLTSAACVED--- 110
T I+ D VG P+ V L LT + G +CGG ++ +VLT+A C D
Sbjct: 255 TSNIIGGTDAAVGEWPWQVSLYLT--------HYGPVCGGTLLTSEWVLTAARCFRDNKR 306
Query: 111 ADRFYIVSGTTKY 123
A + ++ G T +
Sbjct: 307 AGEWKVILGETDF 319
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 33.9 bits (74), Expect = 0.29
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 18/127 (14%)
Query: 91 CGGVIVDQYYVLTSAACVEDADRFYIVSGTTKYVDSFDYKKNDCVCKNRRRVVWKCIPKN 150
CGG +V +V+T++ CV + +G +K + R+ + N
Sbjct: 275 CGGTLVHPRWVVTASHCVHK-----LTTGDLYVRMGAHWKDGKTGSEQDFRIQRIFMHPN 329
Query: 151 YKFDFQDSIKWSSNDIAIVKVDKPFKFGVMEKGCEFATDLICYNNISRELEKAGTKGWIA 210
Y Q +NDIA++ +D+P + + T+L C S L GT+ WI+
Sbjct: 330 YHSPVQ-----YANDIALLLLDRPARL-------DRYTNLACLAPRSSPLPD-GTRCWIS 376
Query: 211 GWGSMNT 217
GWG +++
Sbjct: 377 GWGRLSS 383
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 32.7 bits (71), Expect = 0.68
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 13/67 (19%)
Query: 202 KAGTKGWIAGWGSMNTFREGVYRRQDVHIPENSKCLQEAKVCIMDNESCAKKWAQKFRNI 261
K GTK I+GWG++ +EG SK L +AKV ++ + C+ + Q + +
Sbjct: 342 KPGTKCTISGWGAL---QEGA--------GSTSKVLMQAKVPLVSRDQCSHQ--QSYGDR 388
Query: 262 ITQYMIC 268
IT+ M+C
Sbjct: 389 ITENMLC 395
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 32.7 bits (71), Expect = 0.68
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 158 SIKWSSNDIAIVKVDKPFKFGVMEKGCEFATDLICYNNISRELEKAGTKGWIAGWGSMNT 217
S++ NDIA+VK+ K G + IC + L G G++AGWGS
Sbjct: 92 SLQTFYNDIALVKLRTRVKLGPSVR-------TICLPHKGEALLSPGKYGFVAGWGSTEK 144
Query: 218 FREG 221
R G
Sbjct: 145 LRSG 148
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 32.3 bits (70), Expect = 0.90
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 334 CENDHGGPLIVKYQGKERVIGVIS 357
C+ D GGP++ +Y GK + GV+S
Sbjct: 52 CQGDSGGPMVCEYNGKFNLEGVVS 75
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 32.3 bits (70), Expect = 0.90
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 26/162 (16%)
Query: 56 RILYSKDVQVGNRPYMVYLQLTKESAKAHKYRGWLCGGVIVDQYYVLTSAACV----EDA 111
RI+ ++ + P+ V + L + H CGG ++D Y++LTS+ C +
Sbjct: 245 RIVGGREAPRNSWPWQVEIILKTPNLTTH-----YCGGSLIDPYWILTSSHCFWTYNNIS 299
Query: 112 DRFYIVSGTTKYVDSFDYKKNDCVCKNRRRVVWKCIPKNYKFDFQDSIKWSSNDIAIVKV 171
+F I G D Y+ + + + + + + D I D+A++K+
Sbjct: 300 TQFEIRLGEH---DVRKYEGFEEIIQGDKLYIHPGLVVG------DLISPGDYDVALIKL 350
Query: 172 DKPFKFGVMEKGCEFATDLICYNNISRELEKAGTKGWIAGWG 213
+P V K C ++ +C +++ L GTK ++ GWG
Sbjct: 351 KRP---AVFHK-CVYS---VCLPSVTANL-TTGTKCYVTGWG 384
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 57 ILYSKDVQVGNRPYMVYLQLTKESAKAHKYRGWLCGGVIVDQYYVLTSAACVED 110
I+ + + G P+ V ++L S H +CGG ++ ++VLT+A CV+D
Sbjct: 546 IMGGANAEHGEWPWQVSMKLNSSSLP-H-----ICGGNVISPWWVLTAAHCVQD 593
>SB_39777| Best HMM Match : DUF1168 (HMM E-Value=2.2)
Length = 333
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 391 DVDDIDELRSGKIKSQKQNKNTDAANDSDEEPADKKAR-AGKTKEDAS 437
D ++ + ++ K K+ NK A +DSDEEP K R A K E A+
Sbjct: 183 DEEEREFIQKKKKKTTHSNKKPIAVSDSDEEPLPPKIREAAKKNEKAA 230
>SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 390 KDVDDIDELRSGKIKSQKQNKNTDAANDSDEEPADKKARA 429
K VD+ DE++ K+K +K N A +D D+ K+ RA
Sbjct: 331 KYVDEEDEVKPKKVKKKKDNFKHRALDDGDDGAYHKRIRA 370
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 56 RILYSKDVQVGNRPYMVYLQLTKESAKAHKYRGWLCGGVIVDQYYVLTSAACV 108
R++ D P+ + L++ S K Y CGG ++D +VLT+A CV
Sbjct: 37 RVINGVDATAHAWPWQISLRMM--SKKGDDYH--FCGGSLIDSEWVLTAAHCV 85
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 30.7 bits (66), Expect = 2.7
Identities = 42/190 (22%), Positives = 76/190 (40%), Gaps = 37/190 (19%)
Query: 84 HKYRGWLCGGVIVDQYYVLTSAACVEDADRFYIVSGTTKYVDSFDYKKNDCVCKNRRRVV 143
+K G +CGG IV+ +++T+A CV G ++Y + + + +
Sbjct: 1802 YKTMGHICGGSIVNSQWIVTAAHCVTTKP-----PGASRYT-MYAFSDLNVTLGEHQLYQ 1855
Query: 144 WKCIPKNYKFD---FQDSIKWSSNDIAIVKVDKPFKFGVMEKGCEFATDLICYNNISREL 200
+N + S DIA++K+ +P F +C + +
Sbjct: 1856 LDGSEQNIPIEGIVVHPSYNDLDYDIALLKLRQPITFNAY-------VSQVC---LPQAA 1905
Query: 201 EKAGTKGWIAGWGSMNTFREGVYRRQDVHIPENSKCLQEAKVCIMDNESCAKKWAQKFRN 260
AGT +++GWG + G S LQEA + ++D +C +++RN
Sbjct: 1906 LLAGTPCYVSGWGRIGESSPG------------SNVLQEASIPLVDQRAC----EEQYRN 1949
Query: 261 I--ITQYMIC 268
+ IT M C
Sbjct: 1950 LKPITARMRC 1959
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 91 CGGVIVDQYYVLTSAACVEDADRFYIVSGTTK 122
C G ++ +VLTSA CV D+ + I + + K
Sbjct: 179 CTGTLISTRHVLTSAHCVHDSSEYIISAKSVK 210
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 76 LTKESAKAHKYRGWLCGGVIVDQYYVLTSAACV 108
+ ++ +A ++ W C GV+V +VLT+A CV
Sbjct: 109 IRRKLRRAQRFCPWGCTGVLVGPKHVLTAAHCV 141
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 29.9 bits (64), Expect = 4.8
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 56 RILYSKDVQVGNRPYMVYLQLTKESAKAHKYRGWLCGGVIVDQYYVLTSAACVEDADRFY 115
RI+ D Q + P+MV + G CGG +V +V+T+A CV+
Sbjct: 351 RIISGSDAQPNSWPWMVQINYNN---------GHHCGGTLVSPQWVVTAAHCVDHVKD-- 399
Query: 116 IVSGTTKYVDSFDYKKNDCVCKNRRRVVWKCIPKNYKFDFQDSIKWSSNDIAIVKVDKPF 175
+ + ++K++ +R V + I F+ +I +NDIA++K++KP
Sbjct: 400 PKNYNELAITLGEHKRSASEGTEQRFSVARIIVHPQYFE-PTAI---NNDIALIKLNKPA 455
Query: 176 KFG-------VMEKGCEFATDLICY 193
+ + +G E + ICY
Sbjct: 456 RLNKYVNLACLPRQGEELSDGKICY 480
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 332 GFCENDHGGPLIVKYQGKERVIGVIS 357
G C+ D GGPL+ + G+ + GV+S
Sbjct: 125 GACQGDSGGPLVCERNGQWTLYGVVS 150
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 29.9 bits (64), Expect = 4.8
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 91 CGGVIVDQYYVLTSAACVE--DADRFYIVSGTTKYVDSFDYKKNDCVCKNRRRVVWKCIP 148
CGG ++ ++LT+ CVE A I G + V + +K+ V K + P
Sbjct: 37 CGGSLIAPQWILTATHCVERKQASSIVIRLGARRRVATVGTEKDYIVTKVITHPSYH-KP 95
Query: 149 KNYKFDFQDSIKWSSNDIAIVKVDKP 174
K Y S+DIA++K+DKP
Sbjct: 96 KTY-----------SHDIALLKLDKP 110
>SB_24589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 29.9 bits (64), Expect = 4.8
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 135 VCKNRRRVVWKCIPKNYKFDFQDSIKWSSNDIAIVKVDKPFKFGVMEKGCEFATD 189
+C RR++V IPK YK +++ +K +N + + ++ P+ + + K F D
Sbjct: 70 LCSRRRKIVSVEIPKGYKESYREILKADANVVDLHRLG-PYFYEIGTKLMHFEYD 123
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 326 RSSLQGGFCENDHGGPLIVKYQGKERVIGVISACKIDPKSHSCHGPFLYTSVF 378
RS GG C D GGPL+ + G+ + G +S K+ H P Y +VF
Sbjct: 255 RSGASGG-CNGDSGGPLVCEDNGRWYLHGAVSYGKL-------HCPTTYYTVF 299
>SB_10285| Best HMM Match : SAC3_GANP (HMM E-Value=4.8)
Length = 215
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 10 PLSVVLEHATTELSKASNQTTSRNGTSKANEDEGWEFENTTVVDTRRILYSKDVQV 65
PLS+ + TEL +A +++ ++G +KA E G + ++ V+ RR S +V +
Sbjct: 39 PLSIFDKFKATELLQALVRSSRKDGHAKAEEYAGAQMKSGFVISQRRGADSVEVNL 94
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 90 LCGGVIVDQYYVLTSAACVED 110
+CGG ++ +VLT+A CVED
Sbjct: 105 ICGGSLITPEWVLTAAHCVED 125
>SB_5869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 235 KCLQEAKVCIMDNESCAKKWAQKFRNIITQYMICTKDVMKRLSEICDKKYANCTD 289
+CL + + C D E C + W + C++ + ++E D + A C D
Sbjct: 905 QCLDKGENCTGDPEQCQENWQEMVVQCPFSCRFCSQRSIDDVTECTDARGAACKD 959
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 29.9 bits (64), Expect = 4.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 334 CENDHGGPLIVKYQGKERVIGVIS 357
C+ D GGPL+ +Y+G+ + G S
Sbjct: 476 CQGDSGGPLVCEYKGRWHIEGATS 499
>SB_47448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 319 PDDYTARRSS---LQGGFCENDHGGPLIVKYQGKERVIGVISA 358
PD YT + L GGF G PLIV+ G+ ++G++ A
Sbjct: 101 PDTYTILNTQVLKLSGGFDAAVSGSPLIVRRDGEYSLMGILFA 143
>SB_45419| Best HMM Match : Trypsin (HMM E-Value=0.049)
Length = 345
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 319 PDDYTARRSS---LQGGFCENDHGGPLIVKYQGKERVIGVISA 358
PD YT + L GGF G PLIV+ G+ ++G++ A
Sbjct: 226 PDTYTILNTQVLKLSGGFDAAVSGSPLIVRRDGEYSLMGILFA 268
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 29.5 bits (63), Expect = 6.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 334 CENDHGGPLIVKYQGKERVIGVIS 357
C+ D GGPL+ +Y G+ + G S
Sbjct: 132 CQGDSGGPLVCEYNGRWHIEGATS 155
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 29.5 bits (63), Expect = 6.3
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 10/73 (13%)
Query: 48 NTTVVDTRRILYSKDVQVGNRPYMVYLQLTKESAKAHKYRGWLCGGVIVDQYYVLTSAAC 107
++T RRI+ + + P+MV + L +SA+A CGG +V + +++T+A C
Sbjct: 32 SSTASACRRIMGGQRSTIEQHPWMVAMML--DSAQA-------CGGSLVPEDWIVTAAHC 82
Query: 108 VE-DADRFYIVSG 119
+ + R+ +V+G
Sbjct: 83 FDSNRLRWRVVAG 95
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 29.1 bits (62), Expect = 8.4
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 91 CGGVIVDQYYVLTSAAC 107
CGG ++D Y++LTS+ C
Sbjct: 15 CGGSLIDPYWILTSSHC 31
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 29.1 bits (62), Expect = 8.4
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 379 KNRQFLSCAINK-DVDDIDELRSGKIKSQKQNKNTDAA-----NDSDEEPADKKARAGKT 432
K ++ S NK D ++ DE + KI+ QKQ K N S+EE + +K +A
Sbjct: 131 KRKKVQSKTNNKSDNEEEDERQEKKIRKQKQEKRKRKTVKADFNSSEEEVSSQKTKASSR 190
Query: 433 KE 434
K+
Sbjct: 191 KD 192
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 29.1 bits (62), Expect = 8.4
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 389 NKDVDDIDELRSGKIKSQKQNKNTDAANDSDEEPADKKARAGKTKEDA 436
NK+ D ++ S K + K+ + D+ NDS DKK R ++D+
Sbjct: 346 NKERPDANKNDSLKSRDNKKGRTDDSKNDSLRSRDDKKERPVVNRDDS 393
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.1 bits (62), Expect = 8.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 86 YRGWLCGGVIVDQYYVLTSAACV 108
Y G CGG +V +V+T+A CV
Sbjct: 161 YGGQFCGGTLVHPQWVITAAHCV 183
>SB_13944| Best HMM Match : Citrate_synt (HMM E-Value=0)
Length = 297
Score = 29.1 bits (62), Expect = 8.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 207 GWIAGWGSMNTFREGVYRRQDVHIPENSKCLQEAK 241
GWIA W M + RE + R + V++ + +E K
Sbjct: 261 GWIAQWKEMRSNREPIGRPRQVYVGHTLRPFKEVK 295
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,246,830
Number of Sequences: 59808
Number of extensions: 692755
Number of successful extensions: 2264
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2204
Number of HSP's gapped (non-prelim): 75
length of query: 485
length of database: 16,821,457
effective HSP length: 85
effective length of query: 400
effective length of database: 11,737,777
effective search space: 4695110800
effective search space used: 4695110800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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