Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002283-TA|BGIBMGA002283-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
(325 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 42 0.001
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.011
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.079
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.079
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.18
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 33 0.24
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.24
SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40) 33 0.32
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.42
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 31 0.97
SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 31 1.3
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 30 3.0
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.9
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 29 3.9
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.9
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 29 5.2
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 29 6.8
SB_30272| Best HMM Match : GDI (HMM E-Value=0) 29 6.8
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 29 6.8
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 28 9.0
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 41.5 bits (93), Expect = 0.001
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Query: 13 SWLCGGVIIHEEYILTSAACIQDAEHFYIVSGTYKYSDEDDRYSNPCIKNGAKKAIWKCI 72
S+ CGG +I ++++T+A C + + S E DR ++ G+++ +
Sbjct: 746 SFRCGGALIARDWVVTAAHCFY-YDGKIVPSDILVRLGEHDR----TLEEGSEQNVRA-- 798
Query: 73 PKNYVFDGHENDNIRWMNNDIAIVKVEDGFDFSRRIRGCDFIPKPICYNNQSQTLENPGT 132
N V H N ++ D+A+++++ G + +R +P+P L PG+
Sbjct: 799 -SNLVL--HPLANKNGLDFDVALIQLKGGVKLTAYVRTV-CLPQPT-----DAILVRPGS 849
Query: 133 IVSIAGWGTTAKYNDWVNRRKGNQQDLLES-HVEIISKTKCKRRWGSRYTNIIDNYMICT 191
+ +AGWG+T K + V R G +L+ + +S C+ +TN I M C
Sbjct: 850 VGIVAGWGSTQKGDASV--RSGPPYPVLKQVQLPFVSHRVCQ----VNHTNAITKRMRCA 903
Query: 192 KDI 194
D+
Sbjct: 904 GDV 906
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 41.5 bits (93), Expect = 0.001
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 24/184 (13%)
Query: 8 QSSYRSWLCGGVIIHEEYILTSAACIQDAEHFYIVSGTYKYSDEDDRYSNPCIKNGAKKA 67
QS+Y ++ CGG +I E+++LT+A C+ + G + D + ++
Sbjct: 1184 QSNYNTFHCGGTLIAEDWVLTAAHCVVYKDSGIPYHGLRVFLGVHDITARHMDEH----- 1238
Query: 68 IWKCIPKNYVFDGHENDNIRWMNNDIAIVKVEDGFDFSRRIRGCDFIPKPICY-NNQSQT 126
+ IP ++ H + R ++DIA++++ + + +R P+C N +
Sbjct: 1239 -VQIIPSAGIY-SHPRFSWRTYDSDIALIRLRWKANITEYVR-------PVCLPNGYQRR 1289
Query: 127 LENPGTIVSIAGWGTTAKYNDWVNRRKGNQQDLLESHVEIISKTKCKRRWGSRYTNIIDN 186
L P + GWG T N+R + L E+ V +++ CK+ + + + N
Sbjct: 1290 LVKPRAKGVMLGWGVTE------NKRP--SKTLKEAIVPVVNHNACKKAYENETWPVTSN 1341
Query: 187 YMIC 190
M+C
Sbjct: 1342 -MLC 1344
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 41.1 bits (92), Expect = 0.001
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 16 CGGVIIHEEYILTSAACIQDAEHFYIVSGTYKYSDEDDRYSNPCIKNGAKKAIWKCIPKN 75
CGG +I +++++TS C + YI Y++ + R S G ++ I K
Sbjct: 276 CGGSLIDKQWVVTSGHCFDQRPYAYIPLSYYEFRLGEHREST---TEGWEEIIKG--EKL 330
Query: 76 YVFDGHENDNIRWMNN-DIAIVKVEDGFDFSRRIRGCDFIPKPICYNNQSQTLENPGTIV 134
++ ++ + + + DIA+VK++ F +R+ +C +S + + G
Sbjct: 331 FIHPKYKLGGLDYTGDYDIALVKLKRPAVFYKRVHS-------VCLPEKSWSPPD-GAGC 382
Query: 135 SIAGWGTTAKYNDWVNRRKGNQQDLLESHVEIISKTKCKRRWGSRYTNIIDNYMIC 190
+ GWG TA+ +G L E+ V ++S+ C + Y+ II+ IC
Sbjct: 383 YVTGWGRTAE-------NEGYSDVLREAQVRLVSRDTC----NASYSGIINERYIC 427
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 41.1 bits (92), Expect = 0.001
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 16 CGGVIIHEEYILTSAACIQDAEHFYIVSGTYKYSDEDDRYSNPCIKNGAKKAIWKCIPKN 75
CGG +I +++++TS C + YI Y++ + R S G ++ I K
Sbjct: 561 CGGSLIDKQWVVTSGHCFDQRPYAYIPLSYYEFRLGEHREST---TEGWEEIIKG--EKL 615
Query: 76 YVFDGHENDNIRWMNN-DIAIVKVEDGFDFSRRIRGCDFIPKPICYNNQSQTLENPGTIV 134
++ ++ + + + DIA+VK++ F +R+ +C +S + + G
Sbjct: 616 FIHPKYKLGGLDYTGDYDIALVKLKRPAVFYKRVHS-------VCLPEKSWSPPD-GAGC 667
Query: 135 SIAGWGTTAKYNDWVNRRKGNQQDLLESHVEIISKTKCKRRWGSRYTNIIDNYMIC 190
+ GWG TA+ +G L E+ V ++S+ C + Y+ II+ IC
Sbjct: 668 YVTGWGRTAE-------NEGYSDVLREAQVRLVSRDTC----NASYSGIINERYIC 712
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 37.9 bits (84), Expect = 0.011
Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 36/174 (20%)
Query: 15 LCGGVIIHEEYILTSAACI---QDAEHFYIVSGTYKYSDEDDRYSNPCIKNGAKKAIWKC 71
+CGG ++ E+I+T+A C +DA+ + I G + + D P + ++ I
Sbjct: 134 ICGGSVVAPEWIVTAAHCFAYSKDAKDYTIAVGEHDLNATDGYEQRPDV----ERIILH- 188
Query: 72 IPKNYVFDGHENDNIRWMNNDIAIVKVEDGFDFSRRIRGCDFIPKPICYNNQSQTLENPG 131
PK + H N + D+A++K+ ++ R+R P+C + + LE
Sbjct: 189 -PK---YAPHNNHDY-----DVALIKLASPLQYNDRVR-------PVCLPSLKEDLEE-N 231
Query: 132 TIVSIAGWG--TTAKYNDWVNRRKGNQQDLLESHVEIISKTKCKRRWGSRYTNI 183
T I+GWG A + WV L ++ V ++S+ C++ + + +
Sbjct: 232 TQCYISGWGHLQEAGHGPWV---------LHQAAVPLVSRDTCQKAYNDLHYKV 276
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 35.1 bits (77), Expect = 0.079
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 38/202 (18%)
Query: 11 YRSWLCGGVIIHEEYILTSAACI--QDAEHFYIVSGTYKYSDEDDRYSNPCIKNGAKKAI 68
+ ++CGG ++ ++LT+A CI DA + +V G D D + I+ +
Sbjct: 53 HTGFICGGSLVAPGWVLTAAHCILSDDASKYKVVLG-----DVDRKK----IEGSEQMID 103
Query: 69 WKCIPKNYVFDGHENDNIRWMNNDIAIVKVEDGFDFSRRIRGCDFIPKPICYNNQSQTLE 128
+ K+Y + G+ N ND+A++K+ D+ + DF+ +C +E
Sbjct: 104 VAMVIKHYAY-GNPVPNA----NDVALLKLR---DYPTK---TDFV-NTVCLPQYMDHVE 151
Query: 129 NPGTIVSIAGWGTTAKYNDWVNRRKGNQQDLLESHVEIISKTKC-KRRWGSRYTNI---- 183
G I GWG + Y K Q DL ++S C +R GS+ +
Sbjct: 152 -IGKDCFITGWGRS--YYPGPTANKLQQADL-----RVVSNRACSERHMGSKNMRLENGT 203
Query: 184 --IDNYMICTKDIGQTMSEICN 203
+ M+C D G+T CN
Sbjct: 204 WRVTETMLCAGDAGKTGKNGCN 225
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 35.1 bits (77), Expect = 0.079
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 27/139 (19%)
Query: 6 KKQSSYRSWLCGGVIIHEEYILTSAACIQD--AEHFYIVSGTYKYSDEDDRYSNPCIKNG 63
K SS +CGG +I ++LT+A C+QD A + + G ++ + D G
Sbjct: 564 KLNSSSLPHICGGNVISPWWVLTAAHCVQDERASNIKLTMGEWRLFNVD----------G 613
Query: 64 AKKAIWKCIPKNYVFDGHENDNIRWMNNDIAIVKVEDGFDFSRRIRGCDFIPKPICYNNQ 123
++ IP + H N + ++ D A++K+ +F++ + +P+C +
Sbjct: 614 TEQV----IPVERII-SHANYSYNTVDYDYALLKLTRPLNFTQYV-------QPVCLPDS 661
Query: 124 SQTLENPGTIVSIAGWGTT 142
GT+ + GWG+T
Sbjct: 662 DFP---AGTLCYVTGWGST 677
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 33.9 bits (74), Expect = 0.18
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 28/179 (15%)
Query: 16 CGGVIIHEEYILTSAACIQDAEHFYIVSGTYKYSDEDDRYSNPCIKNGAKKAIWKCIPKN 75
CGG ++HE++++T++ CI D I YK N ++ I I K
Sbjct: 240 CGGALVHEDWVVTASHCIND-----IRPEDYKTHIISLGGHNKTGIMSVEQRIG--IAKI 292
Query: 76 YVFDGHENDNI--RWMNNDIAIVKVEDGFDFSRRIRGCDFIPKPICYNNQSQTLENPGTI 133
Y+ H + N+ NND+A++++ +R + +P+C + + + PGT
Sbjct: 293 YL---HADYNLYPHQYNNDVALIRLAKPAIRTRYV-------QPVCLADGTVSFP-PGTE 341
Query: 134 VSIAGWGTTAKYNDWVNRRKGNQQDLLESHVEIISKTKCKRRWGSRYTNIIDNYMICTK 192
I GWG ++ + + L ++ +++S +C + GS + + M+C +
Sbjct: 342 CWITGWGR-------LHSGGASPEILQQAKTKLLSYAECTKN-GSYEAAAVSSTMLCAQ 392
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 33.5 bits (73), Expect = 0.24
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 8 QSSYRSWLCGGVIIHEEYILTSAACIQDAE 37
+S+ S CGG +IH E++LT+A C+++ +
Sbjct: 278 RSAGGSQFCGGSLIHPEWVLTAAHCLENTQ 307
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 33.5 bits (73), Expect = 0.24
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 8 QSSYRSWLCGGVIIHEEYILTSAACIQDAE 37
+S+ S CGG +IH E++LT+A C+++ +
Sbjct: 238 RSAGGSQFCGGSLIHPEWVLTAAHCLENTQ 267
>SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40)
Length = 607
Score = 33.1 bits (72), Expect = 0.32
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 127 LENPGTIVSIAGWGTTAKYNDWVNRRKGN-QQDLLESHVEIISKTKCKR 174
LENP ++AGWGTT K + G LL+ V I+S +CKR
Sbjct: 268 LENPPNYGTVAGWGTTRKIR--LGYPVGPLSAKLLQVTVPIVSNEECKR 314
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 32.7 bits (71), Expect = 0.42
Identities = 9/26 (34%), Positives = 19/26 (73%)
Query: 8 QSSYRSWLCGGVIIHEEYILTSAACI 33
+S+Y CGG ++H ++++T+A C+
Sbjct: 158 RSNYGGQFCGGTLVHPQWVITAAHCV 183
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 32.7 bits (71), Expect = 0.42
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 15 LCGGVIIHEEYILTSAACIQDAEH 38
+CGG +I E++LT+A C++D H
Sbjct: 105 ICGGSLITPEWVLTAAHCVEDFPH 128
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 32.7 bits (71), Expect = 0.42
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 81 HEN-DNIRWMNNDIAIVKVEDGFDFSRRIRGCDFIPKPICYNNQSQTLENPGTIVSIAGW 139
H N +++ NDIA+VK+ +R IC ++ + L +PG +AGW
Sbjct: 87 HPNFKSLQTFYNDIALVKLRTRVKLGPSVR-------TICLPHKGEALLSPGKYGFVAGW 139
Query: 140 GTTAK 144
G+T K
Sbjct: 140 GSTEK 144
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 31.5 bits (68), Expect = 0.97
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 16 CGGVIIHEEYILTSAACI---QDAEHFYIVSGTY 46
CGG +I E+++T+A C+ D H+ ++ G +
Sbjct: 73 CGGALIDREWVVTAAHCVFQEPDVSHYKVILGDF 106
>SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 31.1 bits (67), Expect = 1.3
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 7/111 (6%)
Query: 211 DINYSDEEETRREAQSEKIPTNLVMHSYY--NDTMANNVTDNGAGARRYAPMADGGFCEN 268
D + EE TR K+ + + Y NDT N YA A+G
Sbjct: 669 DASRDKEEFTRPRPPERKVSSASITLKYRQSNDTSKYNEEPRRQSRVMYAGTANGTASRQ 728
Query: 269 DHGG---PLVYGTGVNSIVIGIISACLVKERTNKCY--GPFLYTSIFKNRQ 314
DHG P T +S G +S+ + E Y P Y ++ K+R+
Sbjct: 729 DHGARPRPYEMDTSSSSSSSGRLSSSVTSEHRPPAYRPSPPSYLAVQKSRE 779
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.1 bits (67), Expect = 1.3
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 31/176 (17%)
Query: 16 CGGVIIHEEYILTSAACIQDAEHFYIVSGTYKYSDEDDRYSNPCIKNGAKKAIWKCIP-K 74
CGG +I ++LT+A C+ + + G + Y SN + + + IP K
Sbjct: 57 CGGSLIDPGWVLTAAHCLVGEQPDSALLGAH-YR------SNKTVGTEKDIKVAQIIPHK 109
Query: 75 NYVFDGHENDNIRWMNNDIAIVKVEDGFDFSRRIRGCDFIPKPICYNNQSQTLENPGTIV 134
NY H M NDIA++K+E+ + + G + + NN ++ G
Sbjct: 110 NY----HSPIE---MANDIALLKLENP---ANLVNGVGTV--CLANNNTHLPVDEFGKCY 157
Query: 135 SIAGWGTTAKYNDWVNRRKGNQQDLLESHVEIISKTKCKRRWGSRYTNIIDNYMIC 190
I GWG+ + +R L+++ V ++SK++C YT I M+C
Sbjct: 158 -ITGWGSLSSGGAAPDR-------LMQASVPLVSKSRCDT---GNYTGKIHESMLC 202
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 16 CGGVIIHEEYILTSAACIQDAEHFYIVSGTYKYSDEDDRYSNPCIKNGAKKAIWKCIPKN 75
CGG +IH ++LT+A CI +V +S + G+ + I +
Sbjct: 417 CGGSLIHSNWVLTAAHCISSKRPAEVVVRLGAHS-----------RLGSLTTDMQDIKVS 465
Query: 76 YVFDGHENDNIRWMNNDIAIVKV 98
+ H N N R M NDIA++K+
Sbjct: 466 AIIT-HSNYNSRTMYNDIALLKL 487
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 16 CGGVIIHEEYILTSAACIQDAEHFYIVSGTYK 47
C G +I ++LTSA C+ D+ + I + + K
Sbjct: 179 CTGTLISTRHVLTSAHCVHDSSEYIISAKSVK 210
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 13 SWLCGGVIIHEEYILTSAACIQDAEH---FYIVSGTY 46
S++CGG ++ +++T+A CI + H + +V+G +
Sbjct: 90 SFICGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEH 126
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 29.5 bits (63), Expect = 3.9
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 15 LCGGVIIHEEYILTSAACIQD 35
+CGG ++ E++LT+A C +D
Sbjct: 283 VCGGTLLTSEWVLTAARCFRD 303
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 29.5 bits (63), Expect = 3.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 12 RSWLCGGVIIHEEYILTSAACIQD 35
R LCGG +I + +++T++ CI D
Sbjct: 868 RFHLCGGALISDRWVVTASHCIHD 891
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 15 LCGGVIIHEEYILTSAACIQ---DAEHFYIVSGTYKYS 49
+CGG +I +++LT+ C+ D + +V GT S
Sbjct: 460 MCGGTLISPDWVLTAGHCVHGQLDPSGYTVVVGTLNQS 497
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 29.5 bits (63), Expect = 3.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 12 RSWLCGGVIIHEEYILTSAAC 32
R CGG ++HE +++T A C
Sbjct: 50 RQQYCGGALVHERWVVTGAHC 70
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 14 WLCGGVIIHEEYILTSAACI--QDAEHFYIVSG 44
++CGG +I +++LT+ CI +D E + +V G
Sbjct: 86 FVCGGSLIAPQWVLTAGHCILTEDPEKYRVVLG 118
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 3 RTNKKQSSYRSWLCGGVIIHEEYILTSAACI---QDAEHFYIVSGTYK 47
R+NK + +CGG ++ ++LT+A C+ + + ++ G +K
Sbjct: 327 RSNKTATLNGHHICGGSLLSSTWVLTAAHCVIRSHNTSDYTVIVGAHK 374
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 28.7 bits (61), Expect = 6.8
Identities = 9/18 (50%), Positives = 15/18 (83%)
Query: 15 LCGGVIIHEEYILTSAAC 32
+CGG +I+ E++LT+A C
Sbjct: 156 ICGGALINREWVLTAAHC 173
>SB_30272| Best HMM Match : GDI (HMM E-Value=0)
Length = 1199
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 112 DFIPKPICYNNQSQTLENPGTIVSIAGWGTTAKYNDWVNRRKGNQQDLLESHVEI 166
DF P IC SQ L++ G I SI T N + +D+ ++ + I
Sbjct: 492 DFAPARICPERLSQVLKDKGVITSIPTLPTPGSENQFEPPIYDTTEDMTQASIAI 546
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 5 NKKQSSYRSWLCGGVIIHEEYILTSAACI 33
+KK Y CGG +I E++LT+A C+
Sbjct: 59 SKKGDDYH--FCGGSLIDSEWVLTAAHCV 85
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 28.3 bits (60), Expect = 9.0
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 16 CGGVIIHEEYILTSAACIQDAEHFYI-VSGTYKYSDEDDRYSNPCIKNGAKKAIWKCIPK 74
CGG +I +++LT+A C + F + T + D R + ++ + KAI+ +
Sbjct: 1266 CGGALIAADWVLTAAHCF---DRFSMPPEWTVQVGVSDMRRRDGKGQSLSIKAIF--VHP 1320
Query: 75 NYVFDGHENDNIRWMNNDIAIVKVEDGFDFSRRIRGCDFIPKPICYNNQSQTLENPGTIV 134
Y HE +D+A+++++ +F+ R+ PIC + G
Sbjct: 1321 QYNSSSHE--------HDLAVLQLQQPAEFNSRV-------SPICIVANEEV--QAGRAC 1363
Query: 135 SIAGWG 140
++AGWG
Sbjct: 1364 AVAGWG 1369
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 28.3 bits (60), Expect = 9.0
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 16 CGGVIIHEEYILTSAACI 33
CGG +IH ++ILT+ C+
Sbjct: 80 CGGSLIHPQWILTATHCV 97
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.136 0.428
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,810,265
Number of Sequences: 59808
Number of extensions: 602195
Number of successful extensions: 1286
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1242
Number of HSP's gapped (non-prelim): 53
length of query: 325
length of database: 16,821,457
effective HSP length: 82
effective length of query: 243
effective length of database: 11,917,201
effective search space: 2895879843
effective search space used: 2895879843
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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