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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002283-TA|BGIBMGA002283-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
         (325 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69787-9|CAA93634.1|  226|Caenorhabditis elegans Hypothetical pr...    36   0.039
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    35   0.090
Z22181-4|CAA80182.1|  824|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p...    30   1.9  
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos...    30   1.9  
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ...    30   1.9  
U64843-16|AAX55689.1|  442|Caenorhabditis elegans Modulation of ...    30   2.6  
U64843-15|AAF98227.2|  489|Caenorhabditis elegans Modulation of ...    30   2.6  
U64843-14|AAM45353.1|  475|Caenorhabditis elegans Modulation of ...    30   2.6  
AF303088-1|AAG36975.1|  489|Caenorhabditis elegans serotonin-gat...    30   2.6  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    29   3.4  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    29   3.4  
AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ...    29   4.5  
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage...    29   4.5  
Z81455-5|CAJ90505.1|  611|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81455-4|CAJ76928.1|  680|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81455-2|CAD54123.1|  745|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81455-1|CAB03807.2|  792|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AL032637-26|CAJ90512.1|  611|Caenorhabditis elegans Hypothetical...    28   7.8  
AL032637-25|CAJ76956.1|  680|Caenorhabditis elegans Hypothetical...    28   7.8  
AL032637-24|CAD54171.1|  745|Caenorhabditis elegans Hypothetical...    28   7.8  
AL032637-23|CAA21625.2|  792|Caenorhabditis elegans Hypothetical...    28   7.8  
AL032637-1|CAD54169.1|  555|Caenorhabditis elegans Hypothetical ...    28   7.8  
AL022716-4|CAA18773.1|  703|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z69787-9|CAA93634.1|  226|Caenorhabditis elegans Hypothetical
           protein C44C10.8 protein.
          Length = 226

 Score = 35.9 bits (79), Expect = 0.039
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 151 RRKGNQQDLLESHVEIISKTKCKRRWGSRYTNIIDNYM-ICTKDIGQTMSEICNEKYVDC 209
           R + + Q+L E+ V+ I   + +RR  S     I  Y    ++  G   + +CN ++VD 
Sbjct: 117 RERAHNQELDEATVKRILAREDQRRRCSSVPEGIQRYTPYQSRQFGPISNNVCNFRHVDA 176

Query: 210 QDINYSDEEETRREAQSEKIPTNLVMHSYYN 240
              N +  E   +  Q    P N   H YYN
Sbjct: 177 NQYNTNFMEYQTQMVQVANFP-NQFSHEYYN 206


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 34.7 bits (76), Expect = 0.090
 Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 28/178 (15%)

Query: 15  LCGGVIIHEEYILTSAACIQDAEHFYIVSGTYKYSDEDDRYSNPCIKNGAKKAIWKCIPK 74
           LCG  +I + +++T+A C    +     + ++ Y  E         KN  +++    + +
Sbjct: 65  LCGATVIDDFWLVTAAHCALQLQ-----TRSFVYVREP--------KNNRERSF--SVKE 109

Query: 75  NYVFDGHENDNIRWMNNDIAIVKVEDGFDFSRRIRGCDFIPKPICYNNQSQTLENPGTIV 134
            Y+  G+ N      +NDIA++++    D S+   G     KP+C  +    L       
Sbjct: 110 AYIHSGYNNQTA---DNDIALLRISS--DLSKL--GI----KPVCLVHDDSKLLKQYKNG 158

Query: 135 SIAGWGTTAKYNDWVNRRKGNQQDLLESHVEIISKTKCKRRWG--SRYTNIIDNYMIC 190
            + G+G T   +     +  N Q L  + V IIS   C + W   S  +  I  Y IC
Sbjct: 159 VVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQIC 216


>Z22181-4|CAA80182.1|  824|Caenorhabditis elegans Hypothetical
           protein ZK632.5 protein.
          Length = 824

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 4/87 (4%)

Query: 42  VSGTYKYSDEDDRYSNPCIKNGAKKAIWKCIPKNYVFDGHENDNIRWMNNDIAIVKVEDG 101
           + G YKY      YS P ++N   +  W   P        E D I   NN   +  V+D 
Sbjct: 116 IDGEYKYR----LYSKPIVRNNIPQLAWDISPALRTRKVAEKDEISPPNNTANVYPVDDW 171

Query: 102 FDFSRRIRGCDFIPKPICYNNQSQTLE 128
              SR  R      + I    + Q++E
Sbjct: 172 GLISREFRSILSCEELILSAREGQSIE 198


>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
            protein M106.1 protein.
          Length = 1244

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/48 (22%), Positives = 26/48 (54%)

Query: 181  TNIIDNYMICTKDIGQTMSEICNEKYVDCQDINYSDEEETRREAQSEK 228
            T   D +  CT+  G  ++ +C +K +  Q +  +D  + +++A ++K
Sbjct: 1174 TRFADGHSTCTRLNGGDIAVLCQDKVLQAQALELTDAGKAKKDAAAKK 1221


>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
            protein M106.1 protein.
          Length = 1244

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/48 (22%), Positives = 26/48 (54%)

Query: 181  TNIIDNYMICTKDIGQTMSEICNEKYVDCQDINYSDEEETRREAQSEK 228
            T   D +  CT+  G  ++ +C +K +  Q +  +D  + +++A ++K
Sbjct: 1174 TRFADGHSTCTRLNGGDIAVLCQDKVLQAQALELTDAGKAKKDAAAKK 1221


>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
            and X-chromosomeassociated MIX-1 protein protein.
          Length = 1244

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/48 (22%), Positives = 26/48 (54%)

Query: 181  TNIIDNYMICTKDIGQTMSEICNEKYVDCQDINYSDEEETRREAQSEK 228
            T   D +  CT+  G  ++ +C +K +  Q +  +D  + +++A ++K
Sbjct: 1174 TRFADGHSTCTRLNGGDIAVLCQDKVLQAQALELTDAGKAKKDAAAKK 1221


>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
            protein M106.1 protein.
          Length = 1244

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/48 (22%), Positives = 26/48 (54%)

Query: 181  TNIIDNYMICTKDIGQTMSEICNEKYVDCQDINYSDEEETRREAQSEK 228
            T   D +  CT+  G  ++ +C +K +  Q +  +D  + +++A ++K
Sbjct: 1174 TRFADGHSTCTRLNGGDIAVLCQDKVLQAQALELTDAGKAKKDAAAKK 1221


>U64843-16|AAX55689.1|  442|Caenorhabditis elegans Modulation of
           locomotion defectiveprotein 1, isoform c protein.
          Length = 442

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 180 YTNIIDNYMI-CTKDIGQTMSEICNEKYVD-CQDINYSDEEETRREAQSEKIPTNLVMHS 237
           Y   +D +M+ C   +  TM E+    Y+  CQ  N     E RRE    ++  + V  +
Sbjct: 298 YVKAMDVWMLGCISFVFGTMVELAFVCYISRCQ--NSVRNAERRRE----RMRNSQVWAN 351

Query: 238 YYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTG 279
               T +N   + G+    Y P ++G    N H  P V G G
Sbjct: 352 GSCRTRSNGYANGGSVISHYHPTSNGNGNNNRHDTPQVTGRG 393


>U64843-15|AAF98227.2|  489|Caenorhabditis elegans Modulation of
           locomotion defectiveprotein 1, isoform a protein.
          Length = 489

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 180 YTNIIDNYMI-CTKDIGQTMSEICNEKYVD-CQDINYSDEEETRREAQSEKIPTNLVMHS 237
           Y   +D +M+ C   +  TM E+    Y+  CQ  N     E RRE    ++  + V  +
Sbjct: 298 YVKAMDVWMLGCISFVFGTMVELAFVCYISRCQ--NSVRNAERRRE----RMRNSQVWAN 351

Query: 238 YYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTG 279
               T +N   + G+    Y P ++G    N H  P V G G
Sbjct: 352 GSCRTRSNGYANGGSVISHYHPTSNGNGNNNRHDTPQVTGRG 393


>U64843-14|AAM45353.1|  475|Caenorhabditis elegans Modulation of
           locomotion defectiveprotein 1, isoform b protein.
          Length = 475

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 180 YTNIIDNYMI-CTKDIGQTMSEICNEKYVD-CQDINYSDEEETRREAQSEKIPTNLVMHS 237
           Y   +D +M+ C   +  TM E+    Y+  CQ  N     E RRE    ++  + V  +
Sbjct: 298 YVKAMDVWMLGCISFVFGTMVELAFVCYISRCQ--NSVRNAERRRE----RMRNSQVWAN 351

Query: 238 YYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTG 279
               T +N   + G+    Y P ++G    N H  P V G G
Sbjct: 352 GSCRTRSNGYANGGSVISHYHPTSNGNGNNNRHDTPQVTGRG 393


>AF303088-1|AAG36975.1|  489|Caenorhabditis elegans serotonin-gated
           chloride channel protein.
          Length = 489

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 180 YTNIIDNYMI-CTKDIGQTMSEICNEKYVD-CQDINYSDEEETRREAQSEKIPTNLVMHS 237
           Y   +D +M+ C   +  TM E+    Y+  CQ  N     E RRE    ++  + V  +
Sbjct: 298 YVKAMDVWMLGCISFVFGTMVELAFVCYISRCQ--NSVRNAERRRE----RMRNSQVWAN 351

Query: 238 YYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTG 279
               T +N   + G+    Y P ++G    N H  P V G G
Sbjct: 352 GSCRTRSNGYANGGSVISHYHPTSNGNGNNNRHDTPQVTGRG 393


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
            protein 44, isoform f protein.
          Length = 6994

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 180  YTNIIDNYMICTKDIGQTMSEICNEKYVDCQDINYSDEEETRREAQSEKIPTNLVMHSYY 239
            YT      +   K+ G+  S+  +EK  D  D     ++E   + Q+E  P + V     
Sbjct: 3940 YTEDDQESLKSPKESGEAFSQFTSEKEQDRSDSPIHSQKEDISQFQNESSPED-VKSEQP 3998

Query: 240  NDTMANNVTDNGAGARRYAPMADGG 264
            +D    ++   G+ +  Y+P + GG
Sbjct: 3999 HDEEKPDLERQGSYSSGYSPKSPGG 4023


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
            protein.
          Length = 6994

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 180  YTNIIDNYMICTKDIGQTMSEICNEKYVDCQDINYSDEEETRREAQSEKIPTNLVMHSYY 239
            YT      +   K+ G+  S+  +EK  D  D     ++E   + Q+E  P + V     
Sbjct: 3940 YTEDDQESLKSPKESGEAFSQFTSEKEQDRSDSPIHSQKEDISQFQNESSPED-VKSEQP 3998

Query: 240  NDTMANNVTDNGAGARRYAPMADGG 264
            +D    ++   G+ +  Y+P + GG
Sbjct: 3999 HDEEKPDLERQGSYSSGYSPKSPGG 4023


>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
           protein Y39A1B.3 protein.
          Length = 1499

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 35  DAEHFYIVSGT-YKYSDEDDRYSNPCIKNGAKKAIWKCIPKNYVFD 79
           DA     + GT  K  +E D YS P  K     ++WK I K + ++
Sbjct: 891 DALRIISILGTPTKLENEQDAYSRPLFKIHQDDSLWKSIEKLFFYE 936


>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
           compensation protein protein.
          Length = 1455

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 35  DAEHFYIVSGT-YKYSDEDDRYSNPCIKNGAKKAIWKCIPKNYVFD 79
           DA     + GT  K  +E D YS P  K     ++WK I K + ++
Sbjct: 847 DALRIISILGTPTKLENEQDAYSRPLFKIHQDDSLWKSIEKLFFYE 892


>Z81455-5|CAJ90505.1|  611|Caenorhabditis elegans Hypothetical
           protein B0399.1e protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 234 VMHSYYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTGVNSIVIGIISACLV 293
           V H Y N      VT    G     P    G C +   G  + G GV+S +I IIS  L 
Sbjct: 309 VEHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTG--IVGAGVSSALIAIISRKLE 366

Query: 294 KERTNKCYGPFLYTSIFKNRQ 314
             R  K    F+  S   N++
Sbjct: 367 LSRAEKHVNNFMADSKLTNQR 387


>Z81455-4|CAJ76928.1|  680|Caenorhabditis elegans Hypothetical
           protein B0399.1d protein.
          Length = 680

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 234 VMHSYYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTGVNSIVIGIISACLV 293
           V H Y N      VT    G     P    G C +   G  + G GV+S +I IIS  L 
Sbjct: 378 VEHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTG--IVGAGVSSALIAIISRKLE 435

Query: 294 KERTNKCYGPFLYTSIFKNRQ 314
             R  K    F+  S   N++
Sbjct: 436 LSRAEKHVNNFMADSKLTNQR 456


>Z81455-2|CAD54123.1|  745|Caenorhabditis elegans Hypothetical
           protein B0399.1b protein.
          Length = 745

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 234 VMHSYYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTGVNSIVIGIISACLV 293
           V H Y N      VT    G     P    G C +   G  + G GV+S +I IIS  L 
Sbjct: 443 VEHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTG--IVGAGVSSALIAIISRKLE 500

Query: 294 KERTNKCYGPFLYTSIFKNRQ 314
             R  K    F+  S   N++
Sbjct: 501 LSRAEKHVNNFMADSKLTNQR 521


>Z81455-1|CAB03807.2|  792|Caenorhabditis elegans Hypothetical
           protein B0399.1a protein.
          Length = 792

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 234 VMHSYYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTGVNSIVIGIISACLV 293
           V H Y N      VT    G     P    G C +   G  + G GV+S +I IIS  L 
Sbjct: 490 VEHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTG--IVGAGVSSALIAIISRKLE 547

Query: 294 KERTNKCYGPFLYTSIFKNRQ 314
             R  K    F+  S   N++
Sbjct: 548 LSRAEKHVNNFMADSKLTNQR 568


>AL032637-26|CAJ90512.1|  611|Caenorhabditis elegans Hypothetical
           protein B0399.1e protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 234 VMHSYYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTGVNSIVIGIISACLV 293
           V H Y N      VT    G     P    G C +   G  + G GV+S +I IIS  L 
Sbjct: 309 VEHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTG--IVGAGVSSALIAIISRKLE 366

Query: 294 KERTNKCYGPFLYTSIFKNRQ 314
             R  K    F+  S   N++
Sbjct: 367 LSRAEKHVNNFMADSKLTNQR 387


>AL032637-25|CAJ76956.1|  680|Caenorhabditis elegans Hypothetical
           protein B0399.1d protein.
          Length = 680

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 234 VMHSYYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTGVNSIVIGIISACLV 293
           V H Y N      VT    G     P    G C +   G  + G GV+S +I IIS  L 
Sbjct: 378 VEHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTG--IVGAGVSSALIAIISRKLE 435

Query: 294 KERTNKCYGPFLYTSIFKNRQ 314
             R  K    F+  S   N++
Sbjct: 436 LSRAEKHVNNFMADSKLTNQR 456


>AL032637-24|CAD54171.1|  745|Caenorhabditis elegans Hypothetical
           protein B0399.1b protein.
          Length = 745

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 234 VMHSYYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTGVNSIVIGIISACLV 293
           V H Y N      VT    G     P    G C +   G  + G GV+S +I IIS  L 
Sbjct: 443 VEHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTG--IVGAGVSSALIAIISRKLE 500

Query: 294 KERTNKCYGPFLYTSIFKNRQ 314
             R  K    F+  S   N++
Sbjct: 501 LSRAEKHVNNFMADSKLTNQR 521


>AL032637-23|CAA21625.2|  792|Caenorhabditis elegans Hypothetical
           protein B0399.1a protein.
          Length = 792

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 234 VMHSYYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTGVNSIVIGIISACLV 293
           V H Y N      VT    G     P    G C +   G  + G GV+S +I IIS  L 
Sbjct: 490 VEHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTG--IVGAGVSSALIAIISRKLE 547

Query: 294 KERTNKCYGPFLYTSIFKNRQ 314
             R  K    F+  S   N++
Sbjct: 548 LSRAEKHVNNFMADSKLTNQR 568


>AL032637-1|CAD54169.1|  555|Caenorhabditis elegans Hypothetical
           protein B0399.1c protein.
          Length = 555

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 234 VMHSYYNDTMANNVTDNGAGARRYAPMADGGFCENDHGGPLVYGTGVNSIVIGIISACLV 293
           V H Y N      VT    G     P    G C +   G  + G GV+S +I IIS  L 
Sbjct: 253 VEHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTG--IVGAGVSSALIAIISRKLE 310

Query: 294 KERTNKCYGPFLYTSIFKNRQ 314
             R  K    F+  S   N++
Sbjct: 311 LSRAEKHVNNFMADSKLTNQR 331


>AL022716-4|CAA18773.1|  703|Caenorhabditis elegans Hypothetical
           protein C24F3.4 protein.
          Length = 703

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/61 (22%), Positives = 28/61 (45%)

Query: 187 YMICTKDIGQTMSEICNEKYVDCQDINYSDEEETRREAQSEKIPTNLVMHSYYNDTMANN 246
           Y +  K +G+  +E+CN+    C   +    +ETR+ A+      N      + DT+  +
Sbjct: 401 YYLGGKKVGEDPAELCNQVLFTCYMASEHSSDETRQCAEGLAKNVNSSHCGIFIDTIVTS 460

Query: 247 V 247
           +
Sbjct: 461 I 461


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.319    0.136    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,474,638
Number of Sequences: 27539
Number of extensions: 451234
Number of successful extensions: 917
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 906
Number of HSP's gapped (non-prelim): 31
length of query: 325
length of database: 12,573,161
effective HSP length: 82
effective length of query: 243
effective length of database: 10,314,963
effective search space: 2506536009
effective search space used: 2506536009
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)

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