Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002282-TA|BGIBMGA002282-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
(320 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 4e-07
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 42 9e-04
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.004
SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40) 37 0.025
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.033
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 36 0.044
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.13
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.18
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 33 0.31
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.31
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 31 1.3
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.3
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.7
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 31 1.7
SB_3247| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 30 2.2
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 30 2.2
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.8
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 29 3.8
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 29 3.8
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 29 5.1
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_49295| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 29 6.7
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 29 6.7
SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055) 29 6.7
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 29 6.7
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 28 8.8
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 28 8.8
SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13) 28 8.8
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_24909| Best HMM Match : Mab-21 (HMM E-Value=3.4e-06) 28 8.8
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 28 8.8
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 28 8.8
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 52.8 bits (121), Expect = 4e-07
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 29/201 (14%)
Query: 2 PYMVYLKLPSNNPKYKDYRRWICGGVIIHEEYILTSAACIEDAKYFYVVSGTYKYVNRHD 61
P+ V L+ + Y + CGG +I E+++LT+A C+ G ++ HD
Sbjct: 1173 PWQVALEFDTFQSNYNTFH---CGGTLIAEDWVLTAAHCVVYKDSGIPYHGLRVFLGVHD 1229
Query: 62 ERDDRFNNPCIKNGAKKAIWKCIPRNYVFDGHENDNIRWMNNDIAIVKVDEEFDFTRRVR 121
+ + IP ++ H + R ++DIA++++ + + T VR
Sbjct: 1230 ITARHMDEHV----------QIIPSAGIYS-HPRFSWRTYDSDIALIRLRWKANITEYVR 1278
Query: 122 GCDFIPKPVAY-NNYSTNLEEPGVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKD 180
PV N Y L +P + + GWG T E +P++ L ++ V ++N +
Sbjct: 1279 -------PVCLPNGYQRRLVKPRAKGVMLGWGVT------ENKRPSKTLKEAIVPVVNHN 1325
Query: 181 RCKRRWGKRYYNIIDNYMICS 201
CK+ + + + N M+C+
Sbjct: 1326 ACKKAYENETWPVTSN-MLCA 1345
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 41.5 bits (93), Expect = 9e-04
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 34/174 (19%)
Query: 23 ICGGVIIHEEYILTSAACI---EDAKYFYVVSGTYKYVNRHDERDDRFNNPCIKNGAKKA 79
ICGG ++ E+I+T+A C +DAK + + G + +N D + R P ++
Sbjct: 134 ICGGSVVAPEWIVTAAHCFAYSKDAKDYTIAVGEHD-LNATDGYEQR---PDVER----- 184
Query: 80 IWKCIPRNYVFDGHENDNIRWMNNDIAIVKVDEEFDFTRRVRGCDFIPKPVAYNNYSTNL 139
I + + H N + D+A++K+ + RVR PV + +L
Sbjct: 185 ----IILHPKYAPHNNHDY-----DVALIKLASPLQYNDRVR-------PVCLPSLKEDL 228
Query: 140 EEPGVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNI 193
EE + I+GWG + E G L Q+ V ++++D C++ + +Y +
Sbjct: 229 EE-NTQCYISGWGHLQ-----EAGHGPWVLHQAAVPLVSRDTCQKAYNDLHYKV 276
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 40.3 bits (90), Expect = 0.002
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 27/179 (15%)
Query: 24 CGGVIIHEEYILTSAACIEDAKYFYVVSGTYKY-VNRHDERDDRFNNPCIKNGAKKAIWK 82
CGG +I +++++TS C + Y Y+ Y++ + H E IK G K I
Sbjct: 276 CGGSLIDKQWVVTSGHCFDQRPYAYIPLSYYEFRLGEHRESTTEGWEEIIK-GEKLFIH- 333
Query: 83 CIPRNYVFDGHENDNIRWMNNDIAIVKVDEEFDFTRRVRGCDFIPKPVAYNNYSTNLEEP 142
P+ Y G + + DIA+VK+ F +RV +P+ ++S
Sbjct: 334 --PK-YKLGGLDYTG----DYDIALVKLKRPAVFYKRVHSV-CLPE----KSWS---PPD 378
Query: 143 GVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYMICS 201
G + GWG T +G + L +++V ++++D C Y II+ IC+
Sbjct: 379 GAGCYVTGWGRTAENEGY-----SDVLREAQVRLVSRDTC----NASYSGIINERYICA 428
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 40.3 bits (90), Expect = 0.002
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 27/179 (15%)
Query: 24 CGGVIIHEEYILTSAACIEDAKYFYVVSGTYKY-VNRHDERDDRFNNPCIKNGAKKAIWK 82
CGG +I +++++TS C + Y Y+ Y++ + H E IK G K I
Sbjct: 561 CGGSLIDKQWVVTSGHCFDQRPYAYIPLSYYEFRLGEHRESTTEGWEEIIK-GEKLFIH- 618
Query: 83 CIPRNYVFDGHENDNIRWMNNDIAIVKVDEEFDFTRRVRGCDFIPKPVAYNNYSTNLEEP 142
P+ Y G + + DIA+VK+ F +RV +P+ ++S
Sbjct: 619 --PK-YKLGGLDYTG----DYDIALVKLKRPAVFYKRVHSV-CLPE----KSWS---PPD 663
Query: 143 GVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYMICS 201
G + GWG T +G + L +++V ++++D C Y II+ IC+
Sbjct: 664 GAGCYVTGWGRTAENEGY-----SDVLREAQVRLVSRDTC----NASYSGIINERYICA 713
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 39.9 bits (89), Expect = 0.003
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 21 RWICGGVIIHEEYILTSAACIEDAKYFYVVSGTYKYVNRHDERDDRFNNPCIKNGAKKAI 80
R ICGG +I +++++T+A C++ SG V H N P K +
Sbjct: 54 RHICGGSLIAKDWVVTAAHCVDRNP---TPSGYTVVVGAHHRTG---NTPVQNTFRLKQL 107
Query: 81 WKCIPRNYVFDGHENDNIRWMNNDIAIVKVDEEFDFTRRVRGCDFIPKPVAYNNYSTNLE 140
+K HE ++R + NDIA++++ E + +V +P S +
Sbjct: 108 FK----------HEQFSMRHLKNDIALLQLHEPVKASDKVNTV-CLPS-------SGSRA 149
Query: 141 EPGVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYMIC 200
+ G R I GWG T GG L Q+ + + C+R G R + MIC
Sbjct: 150 QAGARCYITGWGRT-----VGGGSAAGILQQAMLPVAGDSDCQRTNG-RLVPVDSRSMIC 203
Query: 201 S 201
+
Sbjct: 204 A 204
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 39.5 bits (88), Expect = 0.004
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 18/131 (13%)
Query: 71 CIKNGAKKAIWKCIPRNYVFDGHENDNIRWMNNDIAIVKVDEEFDFTRRVRGCDFIPKPV 130
C + K A+ + IP ++V + E D+ R + NDIA++++ F R + +
Sbjct: 139 CDERNGKTAVQESIPVSHVIEHPEYDD-RKIKNDIALLELSRPVKFDREGK----VGTAC 193
Query: 131 AYNNYSTNLEEPGVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRY 190
N T PG R I GWG+T G P + L Q+ + I + + CK +Y
Sbjct: 194 LTNQQPT----PGKRCYITGWGSTI----GTGNSP-RILQQAMLPIASHNDCK----NKY 240
Query: 191 YNIIDNYMICS 201
Y + +C+
Sbjct: 241 YGVSSTAHLCA 251
>SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40)
Length = 607
Score = 36.7 bits (81), Expect = 0.025
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 139 LEEPGVRANIAGWGTTKHYD-GSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNY 197
LE P +AGWGTT+ G G + LLQ V I++ + CKR Y +
Sbjct: 268 LENPPNYGTVAGWGTTRKIRLGYPVGPLSAKLLQVTVPIVSNEECKR---ASIYTYDSAF 324
Query: 198 MICS----KDNAPVLNEVG 212
C+ K AP +VG
Sbjct: 325 TFCAGFRRKPLAPCFGDVG 343
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 36.3 bits (80), Expect = 0.033
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 101 MNNDIAIVKVDEEFDFTRRVRGCDFIPKPVAYNNYSTNLEEPGVRANIAGWGTTKHYDGS 160
M NDIA++K++ + V G + +A NN ++E G + I GWG+ S
Sbjct: 117 MANDIALLKLENPANL---VNGVGTVC--LANNNTHLPVDEFG-KCYITGWGSL-----S 165
Query: 161 EGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYMICS 201
GG L+Q+ V +++K RC Y I M+C+
Sbjct: 166 SGGAAPDRLMQASVPLVSKSRCDT---GNYTGKIHESMLCA 203
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 36.3 bits (80), Expect = 0.033
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 27/182 (14%)
Query: 24 CGGVIIHEEYILTSAACI-EDAKYFYVVSGTYKYVNRHDERDDRFNNPCIKNGAKKAIWK 82
CGG +I ++++T+A C D K V S + HD ++ G+++ +
Sbjct: 749 CGGALIARDWVVTAAHCFYYDGK--IVPSDILVRLGEHDR--------TLEEGSEQNV-- 796
Query: 83 CIPRNYVFDGHENDNIRWMNNDIAIVKVDEEFDFTRRVRGCDFIPKPVAYNNYSTNLEEP 142
N V H N ++ D+A++++ T VR +P+P L P
Sbjct: 797 -RASNLVL--HPLANKNGLDFDVALIQLKGGVKLTAYVRTV-CLPQPT-----DAILVRP 847
Query: 143 GVRANIAGWGTTKHYDGS-EGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYMICS 201
G +AGWG+T+ D S G P L Q ++ ++ C+ + N I M C+
Sbjct: 848 GSVGIVAGWGSTQKGDASVRSGPPYPVLKQVQLPFVSHRVCQ----VNHTNAITKRMRCA 903
Query: 202 KD 203
D
Sbjct: 904 GD 905
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 35.9 bits (79), Expect = 0.044
Identities = 17/61 (27%), Positives = 38/61 (62%), Gaps = 6/61 (9%)
Query: 141 EPGVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYMIC 200
+PG + I+GWG + +G+ G ++ L+Q++V ++++D+C + + Y + I M+C
Sbjct: 342 KPGTKCTISGWGALQ--EGA--GSTSKVLMQAKVPLVSRDQCSHQ--QSYGDRITENMLC 395
Query: 201 S 201
+
Sbjct: 396 A 396
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 34.3 bits (75), Expect = 0.13
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 37/181 (20%)
Query: 21 RWICGGVIIHEEYILTSAACIEDAKYFYVVSGTYKYVNRHDERDDRFNNPCIKNGAKKAI 80
R ICGG +I E++LT+A C+ED + + + H ++ + AI
Sbjct: 103 RHICGGSLITPEWVLTAAHCVED----------FPHPSAHRIKE------------RSAI 140
Query: 81 WKCIPRNYVFDGHENDNIRWMNNDIAIVKVDEEFDFTRRVRGCDFIPKPVAYNNYSTNLE 140
+ +F H++ ++ + ND+A++K+D + +V +P+ +
Sbjct: 141 QQEFRLTKLFK-HKDFSMSHLKNDVALLKLDNPIQPSDKVNTV-CLPE-------RNSRA 191
Query: 141 EPGVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYMIC 200
+ G + I GWG GG+P++ L Q+ + + + C R+ + + MIC
Sbjct: 192 QVGAQCFITGWGRL-----VGGGQPSEILQQAMLPVASHSACDRK-NSYLVPVEEKSMIC 245
Query: 201 S 201
+
Sbjct: 246 A 246
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 33.9 bits (74), Expect = 0.18
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 24 CGGVIIHEEYILTSAACIEDAKYFYVVSGTYKYVNRHDERDDRFNNPCIKNGAKKAIWKC 83
CGG ++HE++++T++ CI D + YK H N I + ++
Sbjct: 240 CGGALVHEDWVVTASHCINDIR-----PEDYK---THIISLGGHNKTGIMSVEQRI---G 288
Query: 84 IPRNYVFDGHENDNI--RWMNNDIAIVKVDEEFDFTRRVRGCDFIPKPVAYNNYSTNLEE 141
I + Y+ H + N+ NND+A++++ + TR V +PV + + +
Sbjct: 289 IAKIYL---HADYNLYPHQYNNDVALIRLAKPAIRTRYV-------QPVCLADGTVSF-P 337
Query: 142 PGVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYMICS 201
PG I GWG GG + L Q++ ++++ C + G + + M+C+
Sbjct: 338 PGTECWITGWGRL-----HSGGASPEILQQAKTKLLSYAECTKN-GSYEAAAVSSTMLCA 391
Query: 202 K 202
+
Sbjct: 392 Q 392
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 33.1 bits (72), Expect = 0.31
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 24 CGGVIIHEEYILTSAACIEDAK 45
CGG +IH E++LT+A C+E+ +
Sbjct: 286 CGGSLIHPEWVLTAAHCLENTQ 307
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 139 LEEPGVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYM 198
L++ + I GWGT + GG L+Q+ V ++++ +C Y N I + M
Sbjct: 69 LDDLNQKCWITGWGTL-----ASGGNQPNKLMQASVPLVSQSKC----NTAYPNKIHDSM 119
Query: 199 ICS 201
+C+
Sbjct: 120 LCA 122
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 33.1 bits (72), Expect = 0.31
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 24 CGGVIIHEEYILTSAACIEDAK 45
CGG +IH E++LT+A C+E+ +
Sbjct: 246 CGGSLIHPEWVLTAAHCLENTQ 267
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 139 LEEPGVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYM 198
L++ + I GWGT + GG L+Q+ V ++++ +C Y N I + M
Sbjct: 413 LDDLNQKCWITGWGTL-----ASGGNQPNKLMQASVPLVSQSKC----NTAYPNKIHDSM 463
Query: 199 ICS 201
+C+
Sbjct: 464 LCA 466
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 32.3 bits (70), Expect = 0.54
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 43/184 (23%)
Query: 2 PYMVYLKLPSNNPKYKDYRRWICGGVIIHEEYILTSAACIED--AKYFYVVSGTYKYVNR 59
P+ V +KL S++ + ICGG +I ++LT+A C++D A + G ++ N
Sbjct: 558 PWQVSMKLNSSSLPH------ICGGNVISPWWVLTAAHCVQDERASNIKLTMGEWRLFN- 610
Query: 60 HDERDDRFNNPCIKNGAKKAIWKCIPRNYVFDGHENDNIRWMNNDIAIVKVDEEFDFTRR 119
+G ++ IP + H N + ++ D A++K+ +FT+
Sbjct: 611 -------------VDGTEQV----IPVERII-SHANYSYNTVDYDYALLKLTRPLNFTQY 652
Query: 120 VRGCDFIPKPVAYNNYSTNLEEPGVRANIAGWGTTKHYDGSEGGKPTQNLLQS-EVEIIN 178
V +PV + G + GWG+T +Y GS P+ N LQ + ++N
Sbjct: 653 V-------QPVCLPDSDF---PAGTLCYVTGWGST-NYRGS----PSPNYLQEVGLPLVN 697
Query: 179 KDRC 182
+C
Sbjct: 698 HSQC 701
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 31.5 bits (68), Expect = 0.95
Identities = 37/172 (21%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 24 CGGVIIHEEYILTSAACIEDAKYFYVVSGTYKYVNRHDERDDRFNNPCIKNGAKKAIWKC 83
CGG ++H +++T++ C+ Y + H +D K G+++
Sbjct: 275 CGGTLVHPRWVVTASHCVHKL----TTGDLYVRMGAH-WKDG-------KTGSEQDFR-- 320
Query: 84 IPRNYVFDGHENDNIRWMNNDIAIVKVDEEFDFTRRVRGCDFIPKPVAYNNYSTNLEEPG 143
I R ++ + + +++ N DIA++ +D R P+ S+ L + G
Sbjct: 321 IQRIFMHPNYHSP-VQYAN-DIALLLLDRPARLDRYTNLACLAPR-------SSPLPD-G 370
Query: 144 VRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRW-GKRYYNII 194
R I+GWG S GG L+Q++V +++ C + + G+ +Y+++
Sbjct: 371 TRCWISGWGRL-----SSGGASPNVLMQAQVPLVSGQTCSQAYPGRTHYSML 417
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 31.1 bits (67), Expect = 1.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 23 ICGGVIIHEEYILTSAACIEDAK 45
+CGG ++ E++LT+A C D K
Sbjct: 283 VCGGTLLTSEWVLTAARCFRDNK 305
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 20 RRWICGGVIIHEEYILTSAACI-----EDAKYFYVVSGTY 54
R+ CGG ++HE +++T A C ED + + V G Y
Sbjct: 50 RQQYCGGALVHERWVVTGAHCFNPYTSEDPRDWNVTLGEY 89
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 30.7 bits (66), Expect = 1.7
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 35/167 (20%)
Query: 22 WICGGVIIHEEYILTSAACI--EDAKYFYVVSGTYKYVNRHDERDDRFNNPCIKNGAKKA 79
+ICGG ++ ++LT+A CI +DA + VV G V+R I+ +
Sbjct: 56 FICGGSLVAPGWVLTAAHCILSDDASKYKVVLGD---VDRKK----------IEGSEQMI 102
Query: 80 IWKCIPRNYVFDGHENDNIRWMNNDIAIVKVDEEFDFTRRVRGCDFIPKPVAYNNYSTNL 139
+ ++Y + G+ N ND+A++K+ D+ + DF+ V Y ++
Sbjct: 103 DVAMVIKHYAY-GNPVPNA----NDVALLKLR---DYPTKT---DFV-NTVCLPQYMDHV 150
Query: 140 EEPGVRANIAGWGTTKHYDGSEGGKPTQN-LLQSEVEIINKDRCKRR 185
E G I GWG + +Y G PT N L Q+++ +++ C R
Sbjct: 151 -EIGKDCFITGWGRS-YYPG-----PTANKLQQADLRVVSNRACSER 190
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 2 PYMVYLKLPSNNPKYKDYRRWICGGVIIHEEYILTSAACI 41
P+ + L++ S K DY CGG +I E++LT+A C+
Sbjct: 50 PWQISLRMMSK--KGDDYH--FCGGSLIDSEWVLTAAHCV 85
>SB_3247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 6 YLKLPSNNPKYKDYRRWICGGVIIHEEYILTSAACIEDAKYFYVVSGTYKYVNRHDERDD 65
Y+ PS N + + +R +C ++ + L A DA+ VVSG + H E+D
Sbjct: 5 YVVRPSTNSEREIFRAQVCE--LLKDSQFLNMDAT--DAQIHTVVSGALDRL--HYEKD- 57
Query: 66 RFNNPCIKNGAKKAIWKCIPRN 87
PC+K + + +W + RN
Sbjct: 58 ----PCVKYDSNRKVWIYLHRN 75
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 24 CGGVIIHEEYILTSAACIEDAKYFYVV 50
CGG +IH ++LT+A CI + VV
Sbjct: 417 CGGSLIHSNWVLTAAHCISSKRPAEVV 443
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 23 ICGGVIIHEEYILTSAACIEDAKY 46
ICGG +I E++LT+A C++ Y
Sbjct: 62 ICGGSLITPEWVLTAAHCVDHYPY 85
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.9 bits (64), Expect = 2.9
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 18 DYRRWICGGVIIHEEYILTSAACI 41
+Y CGG ++H ++++T+A C+
Sbjct: 160 NYGGQFCGGTLVHPQWVITAAHCV 183
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 142 PGVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYMIC 200
PG++ I GWG +++ S P ++L QS V +++ CKR G + + + + M+C
Sbjct: 59 PGLKCYITGWG--RYH--STITNPAKSLRQSLVPLVDHVTCKR--GLKEFYLDEETMMC 111
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 29.5 bits (63), Expect = 3.8
Identities = 9/20 (45%), Positives = 17/20 (85%)
Query: 23 ICGGVIIHEEYILTSAACIE 42
+CGG +I+ E+++T+A CI+
Sbjct: 459 VCGGSLINREWVVTAAHCID 478
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 23 ICGGVIIHEEYILTSAAC 40
ICGG +I+ E++LT+A C
Sbjct: 156 ICGGALINREWVLTAAHC 173
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 24 CGGVIIHEEYILTSAACI---EDAKYFYVVSGTY 54
CGG +I E+++T+A C+ D ++ V+ G +
Sbjct: 73 CGGALIDREWVVTAAHCVFQEPDVSHYKVILGDF 106
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 22 WICGGVIIHEEYILTSAACI--EDAKYFYVVSG 52
++CGG +I +++LT+ CI ED + + VV G
Sbjct: 86 FVCGGSLIAPQWVLTAGHCILTEDPEKYRVVLG 118
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 242 LHSAHHNVSGRRNVDSGGFCENDHGGPLTYGTGVNSVVIGIIS 284
++S H +G ++ G C+ D GGPL + G++S
Sbjct: 108 IYSYTHLCAGEAKPNAAGACQGDSGGPLVCERNGQWTLYGVVS 150
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 29.1 bits (62), Expect = 5.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 21 RWICGGVIIHEEYILTSAACIED 43
R CGG ++ E+++T+A C+ D
Sbjct: 654 RQFCGGTLVTPEWVITAAHCVVD 676
>SB_49295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 46 YFYVVSGTYKYVNRHDERDDRFNNPCIKNGA 76
Y+ +V KY N H + +NPC+ GA
Sbjct: 75 YYAIVKPVTKYSNMHCSSGECASNPCLSGGA 105
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 148 IAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYMICS 201
I GWG H + GG L Q+ V I+++ RC K Y ID+ M+C+
Sbjct: 241 ITGWG---HL--ASGGDTPDLLQQASVPIVSRSRC----DKAYPGKIDSSMLCA 285
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 24 CGGVIIHEEYILTSAACIEDAKYFYVVSGTYK 55
C G +I ++LTSA C+ D+ + + + + K
Sbjct: 179 CTGTLISTRHVLTSAHCVHDSSEYIISAKSVK 210
>SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055)
Length = 695
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 232 RRVISPEKL-ELHSAHHNVSGRRNVDSGGF 260
R+ ++ +KL EL ++ HNVS R D GGF
Sbjct: 641 RKWMTADKLLELFASQHNVSKRNEGDGGGF 670
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 28.7 bits (61), Expect = 6.7
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 24 CGGVIIHEEYILTSAACIEDAKYF 47
C G +I +++LTSA C+ + K +
Sbjct: 168 CSGTLISRQHVLTSAHCVHNGKSY 191
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 28.3 bits (60), Expect = 8.8
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 24 CGGVIIHEEYILTSAACIEDAK 45
CGG +IH +++LT+ C+ +
Sbjct: 690 CGGSLIHPQWVLTATHCVSSRR 711
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 143 GVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYMICS 201
G R I GWG + GG L Q+ V ++++ RC+ K Y I + M+C+
Sbjct: 822 GTRCWITGWGRL-----ASGGTAPDILQQASVPVVSRARCE----KAYPGKIHDSMLCA 871
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.3 bits (60), Expect = 8.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 22 WICGGVIIHEEYILTSAACIEDAK 45
W C GV++ +++LT+A C+ + K
Sbjct: 122 WGCTGVLVGPKHVLTAAHCVANEK 145
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 28.3 bits (60), Expect = 8.8
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 24 CGGVIIHEEYILTSAACIE 42
CGG ++H +++T++ CI+
Sbjct: 50 CGGTLVHPRFVVTASHCID 68
>SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13)
Length = 803
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 134 NYSTNLEEPGVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDR 181
NY E G+R N+ GWG K G E GK T + + +E +++ R
Sbjct: 461 NYKAT-EIDGLR-NVLGWGFWKKTAGKE-GKKTNHFVSAEAFFLHRPR 505
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 149 AGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDR 181
AG G T +G+ GG T N+L+ +V + NK +
Sbjct: 323 AGGGATAGGNGTAGGGGTPNVLKPKVFVTNKQK 355
>SB_24909| Best HMM Match : Mab-21 (HMM E-Value=3.4e-06)
Length = 702
Score = 28.3 bits (60), Expect = 8.8
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 223 DYSDEVDGTRRVISPEKLELH--SAHHNVSGRRNVDSGG-FCENDHGGPLTYGTGVNSVV 279
+Y EV G R+ E L LH A ++ RRNVDSG F +D + +G + V+
Sbjct: 299 EYISEVHGYVRLRVTEDLALHLRDAVPKLNVRRNVDSGAVFVVSD------FASGESDVI 352
Query: 280 IGIISACLVKQRSNTCYGPFLYTSV 304
+ + S+T + L+T V
Sbjct: 353 SELPDNFFTRALSDTLHFDSLFTCV 377
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 28.3 bits (60), Expect = 8.8
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 23 ICGGVIIHEEYILTSAACIED 43
+CGG +I + +++T++ CI D
Sbjct: 871 LCGGALISDRWVVTASHCIHD 891
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 28.3 bits (60), Expect = 8.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 24 CGGVIIHEEYILTSAACI 41
CGG +IH ++ILT+ C+
Sbjct: 80 CGGSLIHPQWILTATHCV 97
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 28.3 bits (60), Expect = 8.8
Identities = 9/19 (47%), Positives = 16/19 (84%)
Query: 23 ICGGVIIHEEYILTSAACI 41
ICGG I++ ++I+T+A C+
Sbjct: 1808 ICGGSIVNSQWIVTAAHCV 1826
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.138 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,979,978
Number of Sequences: 59808
Number of extensions: 616902
Number of successful extensions: 1229
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1165
Number of HSP's gapped (non-prelim): 81
length of query: 320
length of database: 16,821,457
effective HSP length: 82
effective length of query: 238
effective length of database: 11,917,201
effective search space: 2836293838
effective search space used: 2836293838
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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