Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002281-TA|BGIBMGA002281-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
(241 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 30 0.35
SPBC646.03 |||glutamyl-tRNA amidotransferase|Schizosaccharomyces... 26 5.7
SPBC409.15 |||rRNA processing protein Tsr2 |Schizosaccharomyces ... 25 7.5
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 25 7.5
SPAC977.12 |||L-asparaginase |Schizosaccharomyces pombe|chr 1|||... 25 9.9
SPBPB8B6.05c |||L-asparaginase |Schizosaccharomyces pombe|chr 2|... 25 9.9
SPAC186.03 |||L-asparaginase|Schizosaccharomyces pombe|chr 1|||M... 25 9.9
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 25 9.9
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 9.9
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 29.9 bits (64), Expect = 0.35
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 68 RTNTNSPSLLETDVVLISKKNCKKRW 93
R N+ SP ++TD+ L + +N +K+W
Sbjct: 186 RVNSVSPGYIDTDLTLYADENLRKKW 211
>SPBC646.03 |||glutamyl-tRNA amidotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 471
Score = 25.8 bits (54), Expect = 5.7
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 61 SDGRAIGRTNTNSPSLLETDVVLISKKNCKKRWDPRYHNVIEEHMICAKDSLDSEAMSNI 120
+D + T+ NS L V ISK +K+ ++ + + IC K +L + A SN+
Sbjct: 22 NDAKIKSLTSINSAEYLYDSFVEISKLPLEKKLPLKWKLITVKENICTKTNL-TTAASNM 80
Query: 121 CAEHH 125
+++
Sbjct: 81 LKDYN 85
>SPBC409.15 |||rRNA processing protein Tsr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 179
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 58 QKFSDGRAIGRTNTNSPSLLETDVVLISKKNCKKRWDPRYHNVIEEHMICAKDSLDSE 115
Q D +G +SP +L D+V + K C+ ++P + E H K L+ E
Sbjct: 71 QVLQDEFNVGSIEDDSPYILAQDLVNVWKAACEDNYEP----IREIHERLGKQLLEKE 124
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 46 GTVASIAGWGSTQKFSDGRAIGRTNTNSPSLLET 79
G A+ + W F+DG AIG + +SP ++ET
Sbjct: 132 GEHANFSKWYFASHFNDGHAIGFHDMSSP-IVET 164
>SPAC977.12 |||L-asparaginase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 356
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 69 TNTNSPSLLETDVVLISKKNCKKRWDPRYHNVIEEHMICAKDSLDSEAM 117
TN S +L DV+ ++K + P H ++ H DSL+ AM
Sbjct: 89 TNMGSENLTPADVLKLAKLILAEVAKPNVHGIVITH---GTDSLEETAM 134
>SPBPB8B6.05c |||L-asparaginase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 69 TNTNSPSLLETDVVLISKKNCKKRWDPRYHNVIEEHMICAKDSLDSEAM 117
TN S +L DV+ ++K + P H ++ H DSL+ AM
Sbjct: 89 TNMGSENLTPADVLKLAKLILAEVAKPNVHGIVITH---GTDSLEETAM 134
>SPAC186.03 |||L-asparaginase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 360
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 58 QKFSDGRAIGRTNTNSPSLLETDVVLISKKNCKKRWDPRYHNVIEEHMICAKDSLDSEAM 117
+ FS+ R + TN S L +V+ +++ + P H ++ H DSL+ AM
Sbjct: 81 KNFSNIRGVQVTNVGSEELTPANVLNLTQLILAEVAKPDVHGIVVTH---GTDSLEETAM 137
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 990
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 57 TQKFSDGRAIGRTNTNSPSLLETDVVLISKKNCKKRWDPRYHNV 100
T+ F AI + +P LL+T L+S +C + P+Y N+
Sbjct: 508 TRLFETSFAIKASAFQNPQLLKTCSQLLSSCSCFLQNHPQYLNI 551
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 18 NFQKRVKGCDYVPKMIAYNNQSE 40
N Q+ +K D++PK++ YN + E
Sbjct: 3251 NVQQLLKRDDFIPKILNYNLEKE 3273
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.133 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,156,894
Number of Sequences: 5004
Number of extensions: 47129
Number of successful extensions: 101
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 97
Number of HSP's gapped (non-prelim): 9
length of query: 241
length of database: 2,362,478
effective HSP length: 71
effective length of query: 170
effective length of database: 2,007,194
effective search space: 341222980
effective search space used: 341222980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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