Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002280-TA|BGIBMGA002280-PA|undefined
(101 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyc... 29 0.18
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 24 3.9
SPACUNK4.09 |||conserved protein|Schizosaccharomyces pombe|chr 1... 24 3.9
SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual 24 5.2
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl... 23 6.9
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 23 6.9
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 23 6.9
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 23 6.9
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 23 9.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 23 9.1
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 23 9.1
>SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 381
Score = 28.7 bits (61), Expect = 0.18
Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 18 TAQTFQYSRGWTNGKRDGHKRDELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFVPCDY 77
T + QY G+++G RD ++ +VL+ +L C+ ++ K ++G +F+ +
Sbjct: 306 TRRVLQYINGFSDGSRDRQDVEDYLKKVLQELL--CEAEECKEKVKGISDGSYVFICAEQ 363
Query: 78 IEEEVNQPKRYKGERNHE 95
+ ++ +Y E + E
Sbjct: 364 LWKDRIMCCQYLMEHSFE 381
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 24.2 bits (50), Expect = 3.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 77 YIEEEVNQPKRYKGERNHELFDVFQ 101
YIE EV PK+ KG+ +L ++F+
Sbjct: 348 YIEWEVKFPKKLKGKFLKDLNNLFE 372
>SPACUNK4.09 |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 24.2 bits (50), Expect = 3.9
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 61 VLEGKPLNDRLFVPCDYIEEEVNQPKRYKGERNHELFDV 99
+LE P + LF PC Y++E + ++ N + D+
Sbjct: 112 LLESGPNRNLLFEPCPYLKEVMPVVEKGIKTNNARVLDI 150
>SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1339
Score = 23.8 bits (49), Expect = 5.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 52 PCQLDKLKYVLEGKPLNDRLFVPCDYIEE 80
P L LK EGKPL D V D +++
Sbjct: 932 PWILRGLKLASEGKPLEDLCLVQYDMMQQ 960
>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
endonuclease Cce1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 258
Score = 23.4 bits (48), Expect = 6.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 28 WTNGKRDGHKRDELRDEVL 46
W NG R K+D++ D L
Sbjct: 215 WNNGSRVEFKKDDMADSAL 233
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 23.4 bits (48), Expect = 6.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 55 LDKLKYVLEGKPLNDR 70
L KY L G+PLND+
Sbjct: 1128 LKNTKYTLVGRPLNDQ 1143
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 23.4 bits (48), Expect = 6.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 38 RDELRDEVLERILTPCQLDKLKYVLEG 64
R +RD + +L + D L YVLEG
Sbjct: 105 RQSIRDASHQALLILAKSDALDYVLEG 131
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 23.4 bits (48), Expect = 6.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 38 RDELRDEVLERILTPCQLDK 57
R E+R E L + C+LDK
Sbjct: 805 RKEIRSEALAALFNVCKLDK 824
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 23.0 bits (47), Expect = 9.1
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 52 PCQLDKLKYVLEGKPLNDRLFVPCDYIEEEVNQPKRYKGERNHE 95
P Q D K +N ++ P I+ E N+P+ + +N E
Sbjct: 161 PKQCDDSKIEKPELHVNSKIEEPIHRIDSEHNEPEYHTESKNEE 204
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 23.0 bits (47), Expect = 9.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 40 ELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFV 73
+L + E +LT L +K LE K +++ LF+
Sbjct: 553 DLEKNITEALLTGDVLSAVKACLEEKKISEALFL 586
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 23.0 bits (47), Expect = 9.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 79 EEEVNQPKRYKGERNHELFDVFQ 101
E+++ PKR K + +FD+ Q
Sbjct: 500 EKDIKSPKRLKRGKGKGIFDMLQ 522
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.139 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,976
Number of Sequences: 5004
Number of extensions: 17281
Number of successful extensions: 43
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32
Number of HSP's gapped (non-prelim): 11
length of query: 101
length of database: 2,362,478
effective HSP length: 63
effective length of query: 38
effective length of database: 2,047,226
effective search space: 77794588
effective search space used: 77794588
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)
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