GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002280-TA|BGIBMGA002280-PA|undefined
         (101 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        25   0.53 
Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase pr...    21   8.7  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      21   8.7  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    21   8.7  

>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 37  KRDELRDEVLERILTPCQLDKLKYVLEGKPLND 69
           +R  L +E  E   +P  LD+L  V E  PL+D
Sbjct: 109 RRSALENEFYEANDSPAMLDRLLSVNEDGPLSD 141


>Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase
           protein.
          Length = 137

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 76  DYIEEEVNQPKRYK 89
           D+IE+EVNQ   Y+
Sbjct: 87  DWIEKEVNQSLSYE 100


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 34  DGHKRDELRDEVLERILTPCQLDKLKYVL 62
           D H+   L D + +R+L P  L  L + L
Sbjct: 335 DYHELGSLHDYLQKRVLNPHMLKTLAHSL 363


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/21 (33%), Positives = 15/21 (71%)

Query: 61  VLEGKPLNDRLFVPCDYIEEE 81
           +L+ K L+   F+P DY++++
Sbjct: 568 ILKEKMLDVETFLPLDYLQKK 588


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.139    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,259
Number of Sequences: 2123
Number of extensions: 3629
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 101
length of database: 516,269
effective HSP length: 55
effective length of query: 46
effective length of database: 399,504
effective search space: 18377184
effective search space used: 18377184
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)