Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002280-TA|BGIBMGA002280-PA|undefined
(101 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D32064-1|BAA06836.1| 1002|Homo sapiens 2-oxoglutarate dehydrogen... 30 0.99
D10523-1|BAA01393.1| 1002|Homo sapiens 2-oxoglutarate dehydrogen... 30 0.99
BC128550-1|AAI28551.1| 640|Homo sapiens TTLL11 protein protein. 30 0.99
BC128549-1|AAI28550.1| 636|Homo sapiens TTLL11 protein protein. 30 0.99
BC014617-1|AAH14617.1| 1023|Homo sapiens oxoglutarate (alpha-ket... 30 0.99
BC009580-1|AAH09580.1| 427|Homo sapiens oxoglutarate (alpha-ket... 30 0.99
BC004964-1|AAH04964.1| 1023|Homo sapiens oxoglutarate (alpha-ket... 30 0.99
AC004859-2|AAQ96884.1| 427|Homo sapiens unknown protein. 30 0.99
AC004859-1|AAQ96885.1| 1023|Homo sapiens unknown protein. 30 0.99
AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein. 29 1.7
AJ626860-1|CAF25187.1| 3585|Homo sapiens VPS13C-1B protein protein. 29 1.7
AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein. 29 1.7
AJ608770-1|CAE75582.1| 3710|Homo sapiens VPS13C-1A protein protein. 29 1.7
AB037842-1|BAA92659.1| 1463|Homo sapiens KIAA1421 protein protein. 29 1.7
>D32064-1|BAA06836.1| 1002|Homo sapiens 2-oxoglutarate dehydrogenase
protein.
Length = 1002
Score = 30.3 bits (65), Expect = 0.99
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 26 RGWTNGKRDGHKRDELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFVPCDYIEEEVNQ 84
R W++ KR G + E+ L+ I+ + + YV+ G P RL V + I +E+ Q
Sbjct: 270 RKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQ 328
>D10523-1|BAA01393.1| 1002|Homo sapiens 2-oxoglutarate dehydrogenase
precursor protein.
Length = 1002
Score = 30.3 bits (65), Expect = 0.99
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 26 RGWTNGKRDGHKRDELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFVPCDYIEEEVNQ 84
R W++ KR G + E+ L+ I+ + + YV+ G P RL V + I +E+ Q
Sbjct: 270 RKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQ 328
>BC128550-1|AAI28551.1| 640|Homo sapiens TTLL11 protein protein.
Length = 640
Score = 30.3 bits (65), Expect = 0.99
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 26 RGWTNGKRDGHKRDELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFVPCDYIEEEVNQ 84
R W++ KR G + E+ L+ I+ + + YV+ G P RL V + I +E+ Q
Sbjct: 176 RKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQ 234
>BC128549-1|AAI28550.1| 636|Homo sapiens TTLL11 protein protein.
Length = 636
Score = 30.3 bits (65), Expect = 0.99
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 26 RGWTNGKRDGHKRDELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFVPCDYIEEEVNQ 84
R W++ KR G + E+ L+ I+ + + YV+ G P RL V + I +E+ Q
Sbjct: 172 RKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQ 230
>BC014617-1|AAH14617.1| 1023|Homo sapiens oxoglutarate
(alpha-ketoglutarate) dehydrogenase (lipoamide) protein.
Length = 1023
Score = 30.3 bits (65), Expect = 0.99
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 26 RGWTNGKRDGHKRDELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFVPCDYIEEEVNQ 84
R W++ KR G + E+ L+ I+ + + YV+ G P RL V + I +E+ Q
Sbjct: 270 RKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQ 328
>BC009580-1|AAH09580.1| 427|Homo sapiens oxoglutarate
(alpha-ketoglutarate) dehydrogenase (lipoamide) protein.
Length = 427
Score = 30.3 bits (65), Expect = 0.99
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 26 RGWTNGKRDGHKRDELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFVPCDYIEEEVNQ 84
R W++ KR G + E+ L+ I+ + + YV+ G P RL V + I +E+ Q
Sbjct: 270 RKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQ 328
>BC004964-1|AAH04964.1| 1023|Homo sapiens oxoglutarate
(alpha-ketoglutarate) dehydrogenase (lipoamide) protein.
Length = 1023
Score = 30.3 bits (65), Expect = 0.99
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 26 RGWTNGKRDGHKRDELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFVPCDYIEEEVNQ 84
R W++ KR G + E+ L+ I+ + + YV+ G P RL V + I +E+ Q
Sbjct: 270 RKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQ 328
>AC004859-2|AAQ96884.1| 427|Homo sapiens unknown protein.
Length = 427
Score = 30.3 bits (65), Expect = 0.99
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 26 RGWTNGKRDGHKRDELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFVPCDYIEEEVNQ 84
R W++ KR G + E+ L+ I+ + + YV+ G P RL V + I +E+ Q
Sbjct: 270 RKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQ 328
>AC004859-1|AAQ96885.1| 1023|Homo sapiens unknown protein.
Length = 1023
Score = 30.3 bits (65), Expect = 0.99
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 26 RGWTNGKRDGHKRDELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFVPCDYIEEEVNQ 84
R W++ KR G + E+ L+ I+ + + YV+ G P RL V + I +E+ Q
Sbjct: 270 RKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQ 328
>AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein.
Length = 3628
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 18 TAQTFQYSRGWTNG---KRDGHKRDE--LRDEVLERILTPCQLDKLKYVLEGKPLNDRLF 72
+A T + GW +G K++ K+DE L E ++ ++TP + DKL + L
Sbjct: 463 SADTGEKRGGWFSGLWGKKESKKKDEESLIPETIDDLMTPEEKDKLFTAIGYSESTHNLT 522
Query: 73 VPCDYI 78
+P Y+
Sbjct: 523 LPKQYV 528
>AJ626860-1|CAF25187.1| 3585|Homo sapiens VPS13C-1B protein protein.
Length = 3585
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 18 TAQTFQYSRGWTNG---KRDGHKRDE--LRDEVLERILTPCQLDKLKYVLEGKPLNDRLF 72
+A T + GW +G K++ K+DE L E ++ ++TP + DKL + L
Sbjct: 420 SADTGEKRGGWFSGLWGKKESKKKDEESLIPETIDDLMTPEEKDKLFTAIGYSESTHNLT 479
Query: 73 VPCDYI 78
+P Y+
Sbjct: 480 LPKQYV 485
>AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein.
Length = 3753
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 18 TAQTFQYSRGWTNG---KRDGHKRDE--LRDEVLERILTPCQLDKLKYVLEGKPLNDRLF 72
+A T + GW +G K++ K+DE L E ++ ++TP + DKL + L
Sbjct: 463 SADTGEKRGGWFSGLWGKKESKKKDEESLIPETIDDLMTPEEKDKLFTAIGYSESTHNLT 522
Query: 73 VPCDYI 78
+P Y+
Sbjct: 523 LPKQYV 528
>AJ608770-1|CAE75582.1| 3710|Homo sapiens VPS13C-1A protein protein.
Length = 3710
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 18 TAQTFQYSRGWTNG---KRDGHKRDE--LRDEVLERILTPCQLDKLKYVLEGKPLNDRLF 72
+A T + GW +G K++ K+DE L E ++ ++TP + DKL + L
Sbjct: 420 SADTGEKRGGWFSGLWGKKESKKKDEESLIPETIDDLMTPEEKDKLFTAIGYSESTHNLT 479
Query: 73 VPCDYI 78
+P Y+
Sbjct: 480 LPKQYV 485
>AB037842-1|BAA92659.1| 1463|Homo sapiens KIAA1421 protein protein.
Length = 1463
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 18 TAQTFQYSRGWTNG---KRDGHKRDE--LRDEVLERILTPCQLDKLKYVLEGKPLNDRLF 72
+A T + GW +G K++ K+DE L E ++ ++TP + DKL + L
Sbjct: 487 SADTGEKRGGWFSGLWGKKESKKKDEESLIPETIDDLMTPEEKDKLFTAIGYSESTHNLT 546
Query: 73 VPCDYI 78
+P Y+
Sbjct: 547 LPKQYV 552
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.139 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,109,625
Number of Sequences: 224733
Number of extensions: 512033
Number of successful extensions: 894
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 885
Number of HSP's gapped (non-prelim): 14
length of query: 101
length of database: 73,234,838
effective HSP length: 78
effective length of query: 23
effective length of database: 55,705,664
effective search space: 1281230272
effective search space used: 1281230272
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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