Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002280-TA|BGIBMGA002280-PA|undefined
(101 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025456-2|AAB70958.1| 441|Caenorhabditis elegans Hypothetical ... 29 0.44
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF016428-1|AAB65360.1| 931|Caenorhabditis elegans Hypothetical ... 26 4.1
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z82093-5|CAB05016.3| 192|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z81035-6|CAB02739.1| 119|Caenorhabditis elegans Hypothetical pr... 25 9.6
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 25 9.6
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 25 9.6
>AF025456-2|AAB70958.1| 441|Caenorhabditis elegans Hypothetical
protein C46F9.3 protein.
Length = 441
Score = 29.5 bits (63), Expect = 0.44
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 27 GWTNGKRDGHKRDELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFV 73
GW N +RD +D + E+ I++ ++KY+ +P +D FV
Sbjct: 103 GWENMQRDYMDKDSIIIEIHANIVSSTGFFEVKYLPNSQPDSDNSFV 149
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 43 DEVLERILTPCQLDKLKYVLEGKPLNDRLFVPC-DYIEEEVNQPKRYKGERNHELFDV 99
D + R+ C++D K+ + + R +P Y+E ++ + Y+G N+ +F+V
Sbjct: 163 DYLSVRVSANCRMDVTKFPFDSQTCQIRFSLPIFSYLEVKI-YTELYEGINNYSMFEV 219
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 32 KRDGHKRDELRDEVLERILTPCQLDKLKYVLEGK 65
K+ K+ DE++E +TP D K+V EGK
Sbjct: 195 KKCNGKKQVKEDEIIEVGITPGMKDGEKFVFEGK 228
>AF016428-1|AAB65360.1| 931|Caenorhabditis elegans Hypothetical
protein T05C3.3 protein.
Length = 931
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/50 (22%), Positives = 28/50 (56%)
Query: 38 RDELRDEVLERILTPCQLDKLKYVLEGKPLNDRLFVPCDYIEEEVNQPKR 87
R+E+ ++V+E+ + P ++ + + ND + + +++EVN K+
Sbjct: 504 REEMEEKVVEKSVKPARVKNVSAMRSYNNENDMVIMAVRDLQKEVNSLKK 553
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 62 LEGKPLNDRLFVPCDYIEEEVNQPKRYKGERNHELFDVF 100
+EG P N++ P ++EEE Q ++ E+ + L VF
Sbjct: 315 MEGLPKNEKNRDPFTHLEEERRQKEQDLDEKRNTLEKVF 353
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical protein
K10G4.5 protein.
Length = 1251
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 58 LKYVLEGKPLNDRLFVPCDYIE----EEVNQPKRYKGERNHEL 96
LK + K +ND PC +IE +E+ Q K++K R E+
Sbjct: 1180 LKTICIQKIVNDNSDTPCSWIEPLEIDEICQSKQWKNARFIEI 1222
>Z82093-5|CAB05016.3| 192|Caenorhabditis elegans Hypothetical
protein ZK39.6 protein.
Length = 192
Score = 25.4 bits (53), Expect = 7.2
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 75 CDYIEEEVNQPKRYKG 90
C Y++E+V+ P+R +G
Sbjct: 169 CGYVDEDVSNPRRVRG 184
>Z81035-6|CAB02739.1| 119|Caenorhabditis elegans Hypothetical
protein C15H11.8 protein.
Length = 119
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 34 DGHKRDELRDEVLERILTPCQLDKLKY 60
DG + DE D V++ I T C K Y
Sbjct: 64 DGIENDESADAVVDHICTKCGHSKASY 90
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein
15, isoform a protein.
Length = 780
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 64 GKPLNDRLFVPC---DYIEEEVNQPKRYKGERN 93
G+P+N + P +E +NQP++Y G N
Sbjct: 290 GRPMNGQGATPTGPSSVLESLINQPQQYPGHHN 322
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 64 GKPLNDRLFVPC---DYIEEEVNQPKRYKGERN 93
G+P+N + P +E +NQP++Y G N
Sbjct: 287 GRPMNGQGATPTGPSSVLESLINQPQQYPGHHN 319
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.139 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,376,855
Number of Sequences: 27539
Number of extensions: 94775
Number of successful extensions: 213
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 206
Number of HSP's gapped (non-prelim): 11
length of query: 101
length of database: 12,573,161
effective HSP length: 70
effective length of query: 31
effective length of database: 10,645,431
effective search space: 330008361
effective search space used: 330008361
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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