GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002280-TA|BGIBMGA002280-PA|undefined
         (101 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    50   6e-09
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   1.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   3.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   5.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   5.1  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     20   6.8  

>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
          preprohormone protein.
          Length = 107

 Score = 50.0 bits (114), Expect = 6e-09
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 8/74 (10%)

Query: 17 VTAQTFQYSRGWTNGKRDGHKRDELRDEVL--ERILTPCQLDKLKYVLEGKPLNDRLF-V 73
          V  QTF YS GWTNGKR     +      +  + +   C+L KL+ +L+G  +N++LF  
Sbjct: 19 VMCQTFTYSHGWTNGKRSTSLEELANRNAIQSDNVFANCELQKLRLLLQGN-INNQLFQT 77

Query: 74 PCDYIEEEVNQPKR 87
          PC    E +N PKR
Sbjct: 78 PC----ELLNFPKR 87


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 26  RGWTNGKRDGHKRDELRDEVLERILTP 52
           +GW   ++DG+   +   E L+ IL P
Sbjct: 212 KGWKVERKDGNADGKTLIEALDAILPP 238


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 29  TNGKRDGHKRDELRDEVLERILTP 52
           T   ++ HK +E  DEV     TP
Sbjct: 309 TGSDKENHKTEEPNDEVATYDNTP 332


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 47  ERILTPCQLDKLKYVLEGKPLNDRLFV 73
           E+ LT   L++L+ + E  P N  LF+
Sbjct: 159 EQPLTEQNLEELRDLKETYPFNPVLFI 185


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 47  ERILTPCQLDKLKYVLEGKPLNDRLFV 73
           E+ LT   L++L+ + E  P N  LF+
Sbjct: 197 EQPLTEQNLEELRDLKETYPFNPVLFI 223


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 72  FVPCDYIEEEVNQPKRYKGER 92
           FVP    EE++N+   Y   R
Sbjct: 316 FVPSYPFEEDINEGSNYMQTR 336


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.139    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,656
Number of Sequences: 429
Number of extensions: 1241
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 101
length of database: 140,377
effective HSP length: 49
effective length of query: 52
effective length of database: 119,356
effective search space:  6206512
effective search space used:  6206512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.4 bits)
S2: 38 (19.4 bits)