GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002279-TA|BGIBMGA002279-PA|IPR010987|Glutathione
S-transferase, C-terminal-like, IPR012336|Thioredoxin-like fold,
IPR004045|Glutathione S-transferase, N-terminal, IPR004046|Glutathione
S-transferase, C-terminal
         (215 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   5.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   5.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.8  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 20  VVNILGIKAETREVTLP 36
           +V  LGI +E RE+ LP
Sbjct: 297 IVYYLGIPSEARELQLP 313


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 20  VVNILGIKAETREVTLP 36
           +V  LGI +E RE+ LP
Sbjct: 312 IVYYLGIPSEARELQLP 328


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 160 ISCVATLSSLDCVLPVDKKHVNV 182
           +SC++     +C+  V KK  +V
Sbjct: 60  VSCISGRDRYECIEKVGKKEADV 82


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 160 ISCVATLSSLDCVLPVDKKHVNV 182
           +SC++     +C+  V KK  +V
Sbjct: 60  VSCISGRDRYECIEKVGKKEADV 82


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 160 ISCVATLSSLDCVLPVDKKHVNV 182
           +SC++     +C+  V KK  +V
Sbjct: 60  VSCISGRDRYECIEKVGKKEADV 82


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.136    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,242
Number of Sequences: 429
Number of extensions: 2240
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 215
length of database: 140,377
effective HSP length: 55
effective length of query: 160
effective length of database: 116,782
effective search space: 18685120
effective search space used: 18685120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)